Occurrences: |
view occurrences
id |
c96a66b9-a2f4-4ee0-8e83-fc0f26fabf4d
|
scientificName |
Amphibalanus amphitrite
|
AphiaID |
421137
|
eventDate |
2023-04-27
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
eventID |
SUVA1_20230427_S2B
|
materialSampleID |
USP-24-01-98
|
target_gene |
COI
|
DNA_sequence |
TTTATCAAGTAACATTGCTCATTCTGGTGCTTCAGTTGACTTATCAATTTTCTCTTTACATTTAGCGGGTGCTTCGTCAATTTTAGGTGCCATTAATTTTATGTCTACAGTTATTAACATACGAGCTGAAACACTGACATTTGATCGACTTCCATTATTTGTCTGAAGAGTATTTATTACTGTAATTCTTTTACTTTTATCACTTCCAGTACTAGCAGGAGCTATTACTATGTTGCTAACAGATCGAAATCTGAATACCTCATTTTTTGATCCAACAGGAGGTGGAGATCCAATCTTATACCAACATCTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "JQ035516",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211366",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211368",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211371",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211373",
"identity": 1,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
176.0
|
id |
35ea201f-bc79-42b3-908d-2099223a6dc3
|
scientificName |
Amphibalanus amphitrite
|
AphiaID |
421137
|
eventDate |
2023-04-27
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
eventID |
SUVA1_20230427_PC
|
materialSampleID |
USP-24-01-113
|
target_gene |
COI
|
DNA_sequence |
TTTATCAAGTAACATTGCTCATTCTGGTGCTTCAGTTGACTTATCAATTTTCTCTTTACATTTAGCGGGTGCTTCGTCAATTTTAGGTGCCATTAATTTTATGTCTACAGTTATTAACATACGAGCTGAAACACTGACATTTGATCGACTTCCATTATTTGTCTGAAGAGTATTTATTACTGTAATTCTTTTACTTTTATCACTTCCAGTACTAGCAGGAGCTATTACTATGTTGCTAACAGATCGAAATCTGAATACCTCATTTTTTGATCCAACAGGAGGTGGAGATCCAATCTTATACCAACATCTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "JQ035516",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211366",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211368",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211371",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211373",
"identity": 1,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
98.0
|
id |
2656f426-196f-4090-ba63-9a74a41c95a1
|
scientificName |
Amphibalanus amphitrite
|
AphiaID |
421137
|
eventDate |
2023-04-27
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
eventID |
SUVA1_20230427_S2A
|
materialSampleID |
USP-24-01-97
|
target_gene |
COI
|
DNA_sequence |
TTTATCAAGTAACATTGCTCATTCTGGTGCTTCAGTTGACTTATCAATTTTCTCTTTACATTTAGCTGGTGCTTCGTCAATTTTAGGTGCCATTAATTTTATGTCTACAGTTATTAACATACGAGCTGAAACACTGACATTTGATCGACTTCCATTATTTGTCTGAAGAGTATTTATTACTGTAATTCTTTTACTTTTATCACTTCCAGTACTAGCAGGAGCTATTACTATGTTGCTAACAGATCGAAATCTGAATACCTCATTTTTTGATCCAACAGGAGGTGGAGATCCAATCTTATACCAACATCTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211362",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211376",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211417",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211422",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KU204223",
"identity": 1,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
90.0
|
id |
11e0332b-d2aa-40b5-aef4-542a6a4342de
|
scientificName |
Amphibalanus amphitrite
|
AphiaID |
421137
|
eventDate |
2023-04-27
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
eventID |
SUVA2_20230427_S3C
|
materialSampleID |
USP-24-01-107
|
target_gene |
COI
|
DNA_sequence |
TTTATCAAGTAACATTGCTCATTCTGGTGCTTCAGTTGACTTATCAATTTTCTCTTTACATTTAGCGGGTGCTTCGTCAATTTTAGGTGCCATTAATTTTATGTCTACAGTTATTAACATACGAGCTGAAACACTGACATTTGATCGACTTCCATTATTTGTCTGAAGAGTATTTATTACTGTAATTCTTTTACTTTTATCACTTCCAGTACTAGCAGGAGCTATTACTATGTTGCTAACAGATCGAAATCTGAATACCTCATTTTTTGATCCAACAGGAGGTGGAGATCCAATCTTATACCAACATCTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "JQ035516",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211366",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211368",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211371",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211373",
"identity": 1,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
39.0
|
id |
7539da17-8ee9-4557-9993-4745b669c42d
|
scientificName |
Amphibalanus amphitrite
|
AphiaID |
421137
|
eventDate |
2023-04-27
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
eventID |
SUVA2_20230427_S1A
|
materialSampleID |
USP-24-01-103
|
target_gene |
COI
|
DNA_sequence |
TTTATCAAGTAACATTGCTCATTCTGGTGCTTCAGTTGACTTATCAATTTTCTCTTTACATTTAGCTGGTGCTTCGTCAATTTTAGGTGCCATTAATTTTATGTCTACAGTTATTAACATACGAGCTGAAACACTGACATTTGATCGACTTCCATTATTTGTCTGAAGAGTATTTATTACTGTAATTCTTTTACTTTTATCACTTCCAGTACTAGCAGGAGCTATTACTATGTTGCTAACAGATCGAAATCTGAATACCTCATTTTTTGATCCAACAGGAGGTGGAGATCCAATCTTATACCAACATCTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211362",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211376",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211417",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211422",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KU204223",
"identity": 1,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
28.0
|
id |
ff2562c0-f030-42fa-8871-7904851a88d2
|
scientificName |
Amphibalanus amphitrite
|
AphiaID |
421137
|
eventDate |
2023-04-27
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
eventID |
SUVA1_20230427_S3A
|
materialSampleID |
USP-24-01-100
|
target_gene |
COI
|
DNA_sequence |
TTTATCAAGTAACATTGCTCATTCTGGTGCTTCAGTTGACTTATCAATTTTCTCTTTACATTTAGCGGGTGCTTCGTCAATTTTAGGTGCCATTAATTTTATGTCTACAGTTATTAACATACGAGCTGAAACACTGACATTTGATCGACTTCCATTATTTGTCTGAAGAGTATTTATTACTGTAATTCTTTTACTTTTATCACTTCCAGTACTAGCAGGAGCTATTACTATGTTGCTAACAGATCGAAATCTGAATACCTCATTTTTTGATCCAACAGGAGGTGGAGATCCAATCTTATACCAACATCTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "JQ035516",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211366",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211368",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211371",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211373",
"identity": 1,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
19.0
|
id |
c4d749b1-11ce-4641-8697-a5615a136b56
|
scientificName |
Amphibalanus amphitrite
|
AphiaID |
421137
|
eventDate |
2023-04-27
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
eventID |
SUVA1_20230427_S2B
|
materialSampleID |
USP-24-01-98
|
target_gene |
COI
|
DNA_sequence |
TTTATCAAGTAACATTGCTCATTCTGGTGCTTCAGTTGACTTATCAATTTTCTCTTTACATTTAGCGGGTGCTTCGTCAATTTTAGGTGCCATTAATTTTATGTCTACAGTTATTAACATACGAGCTGAAACACTGACATTTGATCGACTTCCATTATTTGTCTGAAGAGTATTTATTACTGTAATTCTTTTACTTTTATCACTTCCAGTACTAGCAGGAGCTATTACTATGTTGCTAACAGATCGAAATCTGAATACCTCATTTTTTGATCCAACAGGAGGTGGAGACCCAATCTTATACCAACATCTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211366",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211368",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211371",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211373",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211387",
"identity": 1,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
2.0
|
id |
00060c30-a2d1-45b1-b0f4-4751ffbdc1b7
|
scientificName |
Amphibalanus amphitrite
|
AphiaID |
421137
|
eventDate |
2023-04-27
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
eventID |
SUVA2_20230427_S1A
|
materialSampleID |
USP-24-01-103
|
target_gene |
COI
|
DNA_sequence |
TTTATCAAGTAACATTGCTCATTCTGGTGCTTCAGTTGACTTATCAATTTTCTCTTTACATTTAGCGGGTGCTTCGTCAATTTTAGGTGCCATTAATTTTATGTCTACAGTTATTAACATACGAGCTGAAACACTGACATTTGATCGACTTCCATTATTTGTCTGAAGAGTATTTATTACTGTAATTCTTTTACTTTTATCACTTCCAGTACTAGCAGGAGCTATTACTATGTTGCTAACAGATCGAAATCTAAATACCTCATTTTTTGATCCAACAGGAGGTGGAGATCCAATCTTATACCAACATCTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KC138445",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211364",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211365",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211375",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211378",
"identity": 1,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
1.0
|
id |
100a20b7-e222-4646-88b2-ebbdc4c8e492
|
scientificName |
Amphibalanus amphitrite
|
AphiaID |
421137
|
eventDate |
2023-04-27
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
eventID |
SUVA1_20230427_PC
|
materialSampleID |
USP-24-01-113
|
target_gene |
COI
|
DNA_sequence |
TTTATCAAGTAACATTGCTCATTCTGGTGCTTCAGTTGACTTATCAATTTTCTCTTTACATTTAGCTGGTGCTTCGTCAATTTTAGGTGCCATTAATTTTATGTCTACAGTTATTAACATACGAGCTGAAACACTGACATTTGATCGACTTCCATTATTTGTCTGAAGAGTATTTATTACTGTAATTCTTTTACTTTTATCACTTCCAGTACTAGCAGGAGCTATTACTATGTTGCTAACAGATCGAAATCTGAATACCTCATTTTTTGATCCAACAGGAGGTGGAGATCCAATCTTATACCAACATCTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211362",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211376",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211417",
"identity": 1,
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},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211422",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KU204223",
"identity": 1,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
1.0
|
id |
3270a099-8484-48b9-8b44-be0566285d61
|
scientificName |
Amphibalanus amphitrite
|
AphiaID |
421137
|
eventDate |
2023-04-27
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
eventID |
SUVA1_20230427_S2A
|
materialSampleID |
USP-24-01-97
|
target_gene |
COI
|
DNA_sequence |
TTTATCAAGTAACATTGCTCATTCTGGTGCTTCAGTTGACTTATCAATTTTCTCTTTACATTTAGCGGGTGCTTCGTCAATTTTAGGTGCCATTAATTTTATGTCTACAGTTATTAACATACGAGCTGAAACACTGACATTTGATCGACTTCCATTATTTGTCTGAAGAGTATTTATTACTGTAATTCTTTTACTTTTAT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211364",
"identity": 1,
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},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211365",
"identity": 1,
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},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211366",
"identity": 1,
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},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211368",
"identity": 1,
"query_cover": 0.995
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211371",
"identity": 1,
"query_cover": 0.995
}
]
}
|
organismQuantity |
1.0
|
id |
683bdb96-fef9-4858-81d7-4c9ff3bc70aa
|
scientificName |
Amphibalanus amphitrite
|
AphiaID |
421137
|
eventDate |
2023-04-27
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
eventID |
SUVA2_20230427_S1C
|
materialSampleID |
USP-24-01-104
|
target_gene |
COI
|
DNA_sequence |
TTTATCAAGTAACATTGCTCATTCTGGTGCTTCAGTTGACTTATCAATTTTCTCTTTACATTTAGCGGGTGCTTCGTCAATTTTAGGTGCCATTAATTTTATGTCTACAGTTATTAACATACGAGCTGAAACACTGACATTTGATCGACTTCCATTATTTGTCTGAAGAGTATTTATTACTGTAATTCTTTTACTTTTATCACTTCCAGTACTAGCAGGAGCTATTACTATGTTGCTAACAGATCGAAATCTGAATACCTCATTTTTTGATCCAACAGGAGGTGGAGATCCAATCTTATACCAACATCTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "JQ035516",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211366",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211368",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211371",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211373",
"identity": 1,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
1.0
|
id |
c6f9d198-fb99-4a73-b2f9-21dc2fc80901
|
scientificName |
Amphibalanus amphitrite
|
AphiaID |
421137
|
eventDate |
2023-04-27
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
eventID |
SUVA1_20230427_S3A
|
materialSampleID |
USP-24-01-100
|
target_gene |
COI
|
DNA_sequence |
TTTATCAAGTAACATTGCTCATTCTGGTGCTTCAGTTGACTTATCAATTTTCTCTTTACATTTAGCGGGTGCTTCGTCAATTTTAGGTGCCATTAATTTTATGTCTACAGTTATTAACATACGAGCTGAAACACTGACATTTGATCGACTTCCATTATTTGTCTGAAGAGTATTTATTACTGTAATTCTTTTACTTTTATCACTTCCAGTACTAGCAGGAGCTATTACTATGTTGCTAACAGATCGAAATCTGAATACCTCATTTTTTGATCCAACAGGAGGTGGAGACCCAATCTTATACCAACATCTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211366",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211368",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211371",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211373",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211387",
"identity": 1,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
1.0
|
id |
817f46b5-38be-40d2-9945-056c0db17d46
|
scientificName |
Amphibalanus amphitrite
|
AphiaID |
421137
|
eventDate |
2023-04-27
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
eventID |
SUVA1_20230427_S3A
|
materialSampleID |
USP-24-01-100
|
target_gene |
COI
|
DNA_sequence |
TGAAGAGTATTTATTACTGTAAGGCGGGGACTTTTATCACTTCCAGTACTAGCAGGAGCTATTACTATGTTGCTAACAGATCGAAATCTGAATACCTCATTTTTTGATCCAACAGGAGGTGGAGATCCAATCTTATACCAACATCTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"confidence": 0.96
}
]
}
|
organismQuantity |
2.0
|
id |
b3155981-bdc4-48d2-a537-197ccb009c03
|
scientificName |
Amphibalanus amphitrite
|
AphiaID |
421137
|
eventDate |
2023-04-27
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
eventID |
SUVA1_20230427_PC
|
materialSampleID |
USP-24-01-113
|
target_gene |
COI
|
DNA_sequence |
TGAAGAGTATTTATTACTGTAAGGCGGGGACTTTTATCACTTCCAGTACTAGCAGGAGCTATTACTATGTTGCTAACAGATCGAAATCTGAATACCTCATTTTTTGATCCAACAGGAGGTGGAGATCCAATCTTATACCAACATCTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"confidence": 0.96
}
]
}
|
organismQuantity |
1.0
|
|