PacMAN decision support system

Potential detection of Clava multicornis in Fiji

Description:

Potential detection of Clava multicornis with confidence medium on 2022-05-25 in material sample S48, marker 18S

Confidence:

medium

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Clava multicornis
Cnidaria > Hydrozoa > Anthoathecata > Hydractiniidae
WoRMS: 117426

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

1.0

Reads:

4486.0

Names:

Occurrences:

view occurrences

id	308aeefd-c651-4676-af12-75c3e6b6dbdf
scientificName	Apolemia
eventDate	2022-05-25
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S48
target_gene	18S
DNA_sequence	TTGTTGGTTTCTAGGACCGAAGTAATGATTAAGAGGGACAATTGGGGGCATCCGTATTTCGTTGTCAGAGGTGAAATTCTTGGATTTACGAAAGACGAACAACTGCGAAAGCACTTGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Apolemia sp.", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Clava_multicornis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117426", "accession": "JQ407367.1.1618_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "HQ867466.1.870_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "KC583172.1.1095_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "JQ955782.1.960_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "HQ867240.1.879_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	4486.0

id	d65f1f3a-761b-48ab-ac56-0063a0ac7d95
scientificName	Apolemia
eventDate	2022-05-25
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S65
target_gene	18S
DNA_sequence	TTGTTGGTTTCTAGGACCGAAGTAATGATTAAGAGGGACAATTGGGGGCATCCGTATTTCGTTGTCAGAGGTGAAATTCTTGGATTTACGAAAGACGAACAACTGCGAAAGCACTTGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Apolemia sp.", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Clava_multicornis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117426", "accession": "JQ407367.1.1618_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "HQ867466.1.870_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "KC583172.1.1095_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "JQ955782.1.960_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "HQ867240.1.879_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	2626.0

id	001b3b12-a12d-4712-9dfa-af3038c0a75f
scientificName	Apolemia
eventDate	2022-05-25
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S63
target_gene	18S
DNA_sequence	TTGTTGGTTTCTAGGACCGAAGTAATGATTAAGAGGGACAATTGGGGGCATCCGTATTTCGTTGTCAGAGGTGAAATTCTTGGATTTACGAAAGACGAACAACTGCGAAAGCACTTGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Apolemia sp.", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Clava_multicornis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117426", "accession": "JQ407367.1.1618_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "HQ867466.1.870_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "KC583172.1.1095_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "JQ955782.1.960_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "HQ867240.1.879_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	878.0

id	c94eaf88-6150-4668-b2a4-9ac02ddd9253
scientificName	Apolemia
eventDate	2022-05-25
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S45
target_gene	18S
DNA_sequence	TTGTTGGTTTCTAGGACCGAAGTAATGATTAAGAGGGACAATTGGGGGCATCCGTATTTCGTTGTCAGAGGTGAAATTCTTGGATTTACGAAAGACGAACAACTGCGAAAGCACTTGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Apolemia sp.", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Clava_multicornis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117426", "accession": "JQ407367.1.1618_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "HQ867466.1.870_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "KC583172.1.1095_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "JQ955782.1.960_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "HQ867240.1.879_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	101.0

id	52ed8f7d-5a31-4f97-922c-cbd2f85adee1
scientificName	Apolemia
eventDate	2022-05-25
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S47
target_gene	18S
DNA_sequence	TTGTTGGTTTCTAGGACCGAAGTAATGATTAAGAGGGACAATTGGGGGCATCCGTATTTCGTTGTCAGAGGTGAAATTCTTGGATTTACGAAAGACGAACAACTGCGAAAGCACTTGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Apolemia sp.", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Clava_multicornis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117426", "accession": "JQ407367.1.1618_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "HQ867466.1.870_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "KC583172.1.1095_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "JQ955782.1.960_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "HQ867240.1.879_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	95.0

id	d92d94fc-2517-47a4-97c7-b8f914af84a3
scientificName	Apolemia
eventDate	2022-05-25
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S46
target_gene	18S
DNA_sequence	TTGTTGGTTTCTAGGACCGAAGTAATGATTAAGAGGGACAATTGGGGGCATCCGTATTTCGTTGTCAGAGGTGAAATTCTTGGATTTACGAAAGACGAACAACTGCGAAAGCACTTGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Apolemia sp.", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Clava_multicornis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117426", "accession": "JQ407367.1.1618_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "HQ867466.1.870_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "KC583172.1.1095_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "JQ955782.1.960_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "HQ867240.1.879_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	68.0

Clava multicornis in Fiji

Status

Clava multicornis does not have an offial status in Fiji.

Notes

Add a note

No notes found.