PacMAN decision support system

Potential detection of Botryllus schlosseri in Fiji

Description:

Potential detection of Botryllus schlosseri with confidence low on 2022-02-16 in material sample S43, marker 18S

Confidence:

low

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Botryllus schlosseri
Chordata > Ascidiacea > Stolidobranchia > Styelidae
WoRMS: 103862

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

1.0

Reads:

387.0

Names:

Occurrences:

view occurrences

id	b89f6422-d50c-4744-b6a0-5b03ff8b34ae
scientificName	Botryllus
eventDate	2022-02-16
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S43
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAAAAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATATTGGGCGAGCGCGGTCGGTCCGTCGCAGGGCGTGTACTGGTCGCGTTCGTCTCGAGCTTCGGTTCTCCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Botryllus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103529", "confidence": 0.86 }, { "method": "VSEARCH", "scientificName": "Botryllus_schlosseri", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103862", "accession": "FM244858.1.1786_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_planus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215992", "accession": "DQ346653.1.1798_U", "identity": 0.981, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botrylloides_violacea", "accession": "AY903927.1.1803_U", "identity": 0.981, "query_cover": 0.9952 } ] }
organismQuantity	387.0

id	ca1fd5af-6c81-463a-be39-31dac69867ae
scientificName	Botryllus
eventDate	2022-02-16
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S9
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAAAAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATATTGGGCGAGCGCGGTCGGTCCGTCGCAGGGCGTGTACTGGTCGCGTTCGTCTCGAGCTTCGGTTCTCCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Botryllus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103529", "confidence": 0.86 }, { "method": "VSEARCH", "scientificName": "Botryllus_schlosseri", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103862", "accession": "FM244858.1.1786_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_planus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215992", "accession": "DQ346653.1.1798_U", "identity": 0.981, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botrylloides_violacea", "accession": "AY903927.1.1803_U", "identity": 0.981, "query_cover": 0.9952 } ] }
organismQuantity	23.0

id	002b4e69-b87b-4123-8502-5be923a01b12
scientificName	Botryllus
eventDate	2022-02-16
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S22
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAAAAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATATTGGGCGAGCGCGGTCGGTCCGTCGCAGGGCGTGTACTGGTCGCGTTCGTCTCGAGCTTCGGTTCTCCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Botryllus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103529", "confidence": 0.86 }, { "method": "VSEARCH", "scientificName": "Botryllus_schlosseri", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103862", "accession": "FM244858.1.1786_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_planus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215992", "accession": "DQ346653.1.1798_U", "identity": 0.981, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botrylloides_violacea", "accession": "AY903927.1.1803_U", "identity": 0.981, "query_cover": 0.9952 } ] }
organismQuantity	20.0

id	eef28a32-c260-48e2-861f-ee27e9200f28
scientificName	Botryllus
eventDate	2022-02-16
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S21
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAAAAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATATTGGGCGAGCGCGGTCGGTCCGTCGCAGGGCGTGTACTGGTCGCGTTCGTCTCGAGCTTCGGTTCTCCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Botryllus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103529", "confidence": 0.86 }, { "method": "VSEARCH", "scientificName": "Botryllus_schlosseri", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103862", "accession": "FM244858.1.1786_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_planus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215992", "accession": "DQ346653.1.1798_U", "identity": 0.981, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botrylloides_violacea", "accession": "AY903927.1.1803_U", "identity": 0.981, "query_cover": 0.9952 } ] }
organismQuantity	1.0

Botryllus schlosseri does not have an offial status in Fiji.

No notes found.