Occurrences: |
view occurrences
id |
ab886826-6d87-48f4-b486-3e6d7a39bed7
|
scientificName |
Pyura herdmani
|
AphiaID |
251268
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
USP-24-01-57
|
target_gene |
18S
|
DNA_sequence |
TGTTGGTTTTCGGAGCACGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
|
identificationRemarks |
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organismQuantity |
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id |
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|
scientificName |
Pyura herdmani
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AphiaID |
251268
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
USP-24-01-59
|
target_gene |
18S
|
DNA_sequence |
TGTTGGTTTTCGGAGCACGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
|
identificationRemarks |
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organismQuantity |
7345.0
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id |
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|
scientificName |
Pyura herdmani
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AphiaID |
251268
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
USP-24-01-54
|
target_gene |
18S
|
DNA_sequence |
TGTTGGTTTTCGGAGCACGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
|
identificationRemarks |
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|
organismQuantity |
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id |
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|
scientificName |
Pyura herdmani
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AphiaID |
251268
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
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|
materialSampleID |
USP-24-01-56
|
target_gene |
18S
|
DNA_sequence |
TGTTGGTTTTCGGAGCACGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
|
identificationRemarks |
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organismQuantity |
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scientificName |
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|
decimalLongitude |
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materialSampleID |
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target_gene |
18S
|
DNA_sequence |
TGTTGGTTTTCGGAGCACGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
|
identificationRemarks |
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organismQuantity |
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scientificName |
Pyura herdmani
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eventDate |
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decimalLongitude |
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decimalLatitude |
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target_gene |
18S
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DNA_sequence |
TGTTGGTTTTCGGAGCACGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
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identificationRemarks |
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scientificName |
Pyura herdmani
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eventDate |
2023-08-15
|
decimalLongitude |
178.425933
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decimalLatitude |
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materialSampleID |
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target_gene |
18S
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DNA_sequence |
TGTTGGTTTTCGGAGCACGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
|
identificationRemarks |
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organismQuantity |
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scientificName |
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AphiaID |
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eventDate |
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decimalLongitude |
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target_gene |
18S
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DNA_sequence |
TGTTGGTTTTCGGAGCACGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
|
identificationRemarks |
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scientificName |
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DNA_sequence |
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identificationRemarks |
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organismQuantity |
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scientificName |
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eventDate |
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decimalLongitude |
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target_gene |
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DNA_sequence |
TGTTGGTTTTCGGAGCACGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
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identificationRemarks |
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TGTTGGTTTTCGGAGCACGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGCTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
|
identificationRemarks |
{
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{
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{
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"accession": "JF961801.1.1702_U",
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}
]
}
|
organismQuantity |
37.0
|
id |
4d795249-6818-420e-a782-c1fb4aac96b3
|
scientificName |
Pyura
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
USP-24-01-37
|
target_gene |
18S
|
DNA_sequence |
TGTTGGTTTTCGGAGCACGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGCTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
|
identificationRemarks |
{
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"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
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{
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},
{
"method": "VSEARCH",
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{
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}
]
}
|
organismQuantity |
11.0
|
id |
24cdc867-b34e-4fdd-95fd-8da0ce6da8c0
|
scientificName |
Pyura
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
USP-24-01-49
|
target_gene |
18S
|
DNA_sequence |
TGTTGGTTTTCGGAGCACGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGCTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
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"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
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{
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{
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{
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}
]
}
|
organismQuantity |
2.0
|
id |
f74a9f3a-919b-4d34-975b-aa618ab76224
|
scientificName |
Pyura
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
USP-24-01-38
|
target_gene |
18S
|
DNA_sequence |
TGTTGGTTTTCGGAGCACGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGCTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
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"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
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},
{
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},
{
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},
{
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{
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}
]
}
|
organismQuantity |
2.0
|
id |
9dc04936-41ff-42b7-95da-28523d2c44e1
|
scientificName |
Pyura
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
USP-24-01-59
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTAGGGTGGGCGCCGCCGGTCCGTCGCAAGGCGTGTTACTGGCGGCGTCTGCCTTGCCTTCGGTTCTCCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGATAAGTTTACTTTGAAAAAATTAGAGTGCTCAAAGCAGG
|
identificationRemarks |
{
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"parameters": {
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"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
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"annotations": [
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},
{
"method": "VSEARCH",
"scientificName": "Pyura_praeputialis",
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{
"method": "VSEARCH",
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},
{
"method": "VSEARCH",
"scientificName": "Pyura_praeputialis",
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},
{
"method": "VSEARCH",
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"accession": "JF961816.1.1702_U",
"identity": 0.99,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
1.0
|
|