| Occurrences: |
view occurrences
| id |
3ff4cad3-d6d9-4896-b44f-01275694d893
|
| scientificName |
Bougainvillia
|
| eventDate |
2023-05-31
|
| decimalLongitude |
178.4255
|
| decimalLatitude |
-18.13163
|
| materialSampleID |
USP-24-01-26
|
| target_gene |
18S
|
| DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTCGGGACGGGCCAGTTGGTCCGCCGCAAGGTGTGTACTGACTGGTCTGTTCTTCTTCGCAAAGACTGCGTGTGCTCTTTATTGAGTGTGCGTAGGATTTACGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCT
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Bougainvillia sp.",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Bougainvillia_muscus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117328",
"accession": "FJ550582.1.1663_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Bougainvillia_sp.",
"accession": "AF358093.1.1820_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Bougainvillia_sp.",
"accession": "KF962203.1.1680_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Bougainvillia_sp.",
"accession": "KF962204.1.1680_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Bougainvillia_sp.",
"accession": "KF962205.1.1680_U",
"identity": 1,
"query_cover": 0.9952
}
]
}
|
| organismQuantity |
5.0
|
| id |
27d6c56b-aca0-4b61-95b0-14c8b8beb0ac
|
| scientificName |
Bougainvillia
|
| eventDate |
2023-05-31
|
| decimalLongitude |
178.4255
|
| decimalLatitude |
-18.13163
|
| materialSampleID |
USP-24-01-28
|
| target_gene |
18S
|
| DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTCGGGACGGGCCAGTTGGTCCGCCGCAAGGTGTGTACTGACTGGTCTGTTCTTCTTCGCAAAGACTGCGTGTGCTCTTTATTGAGTGTGCGTAGGATTTACGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCT
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Bougainvillia sp.",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Bougainvillia_muscus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117328",
"accession": "FJ550582.1.1663_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Bougainvillia_sp.",
"accession": "AF358093.1.1820_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Bougainvillia_sp.",
"accession": "KF962203.1.1680_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Bougainvillia_sp.",
"accession": "KF962204.1.1680_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Bougainvillia_sp.",
"accession": "KF962205.1.1680_U",
"identity": 1,
"query_cover": 0.9952
}
]
}
|
| organismQuantity |
4.0
|
| id |
00799d11-d756-4235-9497-9a524cb5cf6f
|
| scientificName |
Bougainvillia
|
| eventDate |
2023-05-31
|
| decimalLongitude |
178.4255
|
| decimalLatitude |
-18.13163
|
| materialSampleID |
USP-24-01-27
|
| target_gene |
18S
|
| DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTCGGGACGGGCCAGTTGGTCCGCCGCAAGGTGTGTACTGACTGGTCTGTTCTTCTTCGCAAAGACTGCGTGTGCTCTTTATTGAGTGTGCGTAGGATTTACGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCT
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Bougainvillia sp.",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Bougainvillia_muscus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117328",
"accession": "FJ550582.1.1663_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Bougainvillia_sp.",
"accession": "AF358093.1.1820_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Bougainvillia_sp.",
"accession": "KF962203.1.1680_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Bougainvillia_sp.",
"accession": "KF962204.1.1680_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Bougainvillia_sp.",
"accession": "KF962205.1.1680_U",
"identity": 1,
"query_cover": 0.9952
}
]
}
|
| organismQuantity |
2.0
|
|