| Occurrences: |
view occurrences
| id |
00a2e12d-9f12-4426-828f-c906092c37b1
|
| scientificName |
Balanus trigonus
|
| AphiaID |
106223
|
| eventDate |
2022-05-25
|
| decimalLongitude |
178.42325
|
| decimalLatitude |
-18.13513
|
| materialSampleID |
S136
|
| target_gene |
COI
|
| DNA_sequence |
TCTCTCTAGAAATATTGCTCATTCAGGAGCTTCCGTAGATTTATCGATTTTTTCTTTACACTTAGCGGGAGCTTCATCAATTTTAGGAGCTATTAATTTTATATCAACTGTTATTAATATGCGAGCTGAAACATTAACATTTGATCGTCTTCCATTATTTGTGTGAAGAGTATTTATTACTGTAATTCTTCTATTACTTTCACTACCAGTATTAGCTGGAGCAATTACAATGTTATTAACTGACCGAAACCTAAATACTTCATTTTTTGACCCAACTGGAGGAGGTGACCCTATCTTATACCAACATTTATTT
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "JQ035523",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "MK308152",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "MK308322",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "MW277822",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "KC138452",
"identity": 0.997,
"query_cover": 0.9968
}
]
}
|
| organismQuantity |
8.0
|
| id |
4cbcf2cc-5833-47c5-8c40-70d5fe7349a6
|
| scientificName |
Balanus trigonus
|
| AphiaID |
106223
|
| eventDate |
2022-05-25
|
| decimalLongitude |
178.4255
|
| decimalLatitude |
-18.13163
|
| materialSampleID |
S152
|
| target_gene |
COI
|
| DNA_sequence |
TCTCTCTAGAAATATTGCTCACTCAGGAGCTTCCGTAGATTTATCGATTTTTTCTTTACACTTAGCGGGAGCTTCATCAATTTTAGGAGCTATTAATTTTATATCAACTGTTATTAATATGCGAGCTGAAACATTAACATTTGATCGTCTTCCATTATTTGTGTGAAGAGTATTTATTACTGTAATTCTTCTATTACTTTCACTACCAGTATTAGCTGGAGCAATTACAATGTTATTAACTGACCGAAACCTAAATACTTCATTTTTTGACCCAACTGGAGGAGGTGACCCTATCTTATACCAACATTTATTT
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "JQ035523",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "MK308152",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "MK308322",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "MW277822",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "KC138452",
"identity": 0.994,
"query_cover": 0.9968
}
]
}
|
| organismQuantity |
26.0
|
| id |
6cda0f08-6a45-4501-8fbd-df53a1088124
|
| scientificName |
Balanus trigonus
|
| AphiaID |
106223
|
| eventDate |
2022-05-25
|
| decimalLongitude |
178.4255
|
| decimalLatitude |
-18.13163
|
| materialSampleID |
S152
|
| target_gene |
COI
|
| DNA_sequence |
TCTCTCTAGAAATATTGCTCACTCAGGAGCTTCCGTAGATTTATCGATTTTTTCTTTACACTTAGCGGGAGCTTCATCAATTTTAGGAGCTATTAATTTTATATCAACTGTTATTAATATGCGAGCTGAAACATTAACATTTGATCGTCTTCCATTATTTGTGTGGAGAGTATTTATTACTGTAATTCTTCTATTACTTTCACTACCAGTATTAGCTGGAGCAATTACAATGTTATTAACTGACCGAAACCTAAATACTTCATTTTTTGACCCAACTGGAGGAGGTGACCCTATCTTATACCAACATTTATTT
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "JQ035523",
"identity": 0.994,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "MK308152",
"identity": 0.994,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "MK308322",
"identity": 0.994,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "MW277822",
"identity": 0.994,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "KC138452",
"identity": 0.99,
"query_cover": 0.9968
}
]
}
|
| organismQuantity |
1.0
|
|