PacMAN decision support system

Potential detection of Halocynthia roretzi in Fiji

Description:

Potential detection of Halocynthia roretzi with confidence low on 2024-02-28 in material sample USP-24-01-202, marker 18S

Confidence:

low

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Halocynthia roretzi
Chordata > Ascidiacea > Stolidobranchia > Pyuridae
WoRMS: 250680

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

1.0

Reads:

5869.0

Names:

7

Occurrences:

view occurrences

id	4464103d-4d5d-4ec9-9666-822829329ed1
scientificName	Pyura
eventDate	2024-02-28
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-202
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pyura", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103524", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Metandrocarpa_taylori", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250836", "accession": "AY903922.1.1772_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_roretzi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250680", "accession": "AB013016.1.1751_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Cnemidocarpa_finmarkiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103870", "accession": "L12413.1.1763_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Pyura_haustor", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251266", "accession": "AY903926.1.1774_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_igaboja", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250677", "accession": "AY903925.1.1772_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	5869.0

id	288b86cf-c0ab-4290-949c-144dd93133b9
scientificName	Pyura
eventDate	2024-02-28
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-201
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pyura", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103524", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Metandrocarpa_taylori", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250836", "accession": "AY903922.1.1772_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_roretzi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250680", "accession": "AB013016.1.1751_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Cnemidocarpa_finmarkiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103870", "accession": "L12413.1.1763_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Pyura_haustor", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251266", "accession": "AY903926.1.1774_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_igaboja", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250677", "accession": "AY903925.1.1772_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	499.0

id	015de65b-b43a-42de-9c68-5ba57cc54154
scientificName	Pyura
eventDate	2024-02-28
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-200
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pyura", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103524", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Metandrocarpa_taylori", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250836", "accession": "AY903922.1.1772_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_roretzi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250680", "accession": "AB013016.1.1751_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Cnemidocarpa_finmarkiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103870", "accession": "L12413.1.1763_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Pyura_haustor", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251266", "accession": "AY903926.1.1774_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_igaboja", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250677", "accession": "AY903925.1.1772_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	133.0

id	75472691-2a04-4443-b915-04c6618f76ca
scientificName	Pyura
eventDate	2024-02-28
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-92
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pyura", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103524", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Metandrocarpa_taylori", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250836", "accession": "AY903922.1.1772_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_roretzi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250680", "accession": "AB013016.1.1751_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Cnemidocarpa_finmarkiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103870", "accession": "L12413.1.1763_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Pyura_haustor", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251266", "accession": "AY903926.1.1774_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_igaboja", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250677", "accession": "AY903925.1.1772_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	29.0

id	7433c089-265d-4bfb-bd1d-0eea55fbf6ee
scientificName	Pyura
eventDate	2024-02-28
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-91
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pyura", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103524", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Metandrocarpa_taylori", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250836", "accession": "AY903922.1.1772_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_roretzi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250680", "accession": "AB013016.1.1751_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Cnemidocarpa_finmarkiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103870", "accession": "L12413.1.1763_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Pyura_haustor", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251266", "accession": "AY903926.1.1774_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_igaboja", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250677", "accession": "AY903925.1.1772_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	4.0

id	e104e455-54bb-4cb1-81ae-0c15479ad875
scientificName	Pyura
eventDate	2024-02-28
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-93
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pyura", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103524", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Metandrocarpa_taylori", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250836", "accession": "AY903922.1.1772_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_roretzi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250680", "accession": "AB013016.1.1751_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Cnemidocarpa_finmarkiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103870", "accession": "L12413.1.1763_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Pyura_haustor", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251266", "accession": "AY903926.1.1774_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_igaboja", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250677", "accession": "AY903925.1.1772_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	4.0

id	135623c1-7dc2-42e8-ab8d-1769e0d198d2
scientificName	Pyura
eventDate	2024-02-28
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-197
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pyura", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103524", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Metandrocarpa_taylori", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250836", "accession": "AY903922.1.1772_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_roretzi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250680", "accession": "AB013016.1.1751_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Cnemidocarpa_finmarkiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103870", "accession": "L12413.1.1763_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Pyura_haustor", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251266", "accession": "AY903926.1.1774_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_igaboja", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250677", "accession": "AY903925.1.1772_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	3.0

id	e5c115c8-6623-4c14-9720-32da4868f75f
scientificName	Pyura
eventDate	2024-02-28
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-96
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pyura", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103524", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Metandrocarpa_taylori", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250836", "accession": "AY903922.1.1772_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_roretzi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250680", "accession": "AB013016.1.1751_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Cnemidocarpa_finmarkiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103870", "accession": "L12413.1.1763_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Pyura_haustor", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251266", "accession": "AY903926.1.1774_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_igaboja", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250677", "accession": "AY903925.1.1772_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	3.0

id	bb506529-cf8a-4b47-bddc-a7d982564280
scientificName	Pyura
eventDate	2024-02-28
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-196
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pyura", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103524", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Metandrocarpa_taylori", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250836", "accession": "AY903922.1.1772_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_roretzi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250680", "accession": "AB013016.1.1751_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Cnemidocarpa_finmarkiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103870", "accession": "L12413.1.1763_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Pyura_haustor", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251266", "accession": "AY903926.1.1774_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_igaboja", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250677", "accession": "AY903925.1.1772_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	2.0

id	cbea0194-f1ab-4ea8-a377-aa7e57879e1d
scientificName	Pyura
eventDate	2024-02-28
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-198
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pyura", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103524", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Metandrocarpa_taylori", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250836", "accession": "AY903922.1.1772_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_roretzi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250680", "accession": "AB013016.1.1751_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Cnemidocarpa_finmarkiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103870", "accession": "L12413.1.1763_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Pyura_haustor", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251266", "accession": "AY903926.1.1774_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_igaboja", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250677", "accession": "AY903925.1.1772_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	2.0

id	cfaa5129-aa50-4cfc-a8a9-74c312ed669d
scientificName	Pyura
eventDate	2024-02-28
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-95
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pyura", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103524", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Metandrocarpa_taylori", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250836", "accession": "AY903922.1.1772_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_roretzi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250680", "accession": "AB013016.1.1751_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Cnemidocarpa_finmarkiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103870", "accession": "L12413.1.1763_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Pyura_haustor", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251266", "accession": "AY903926.1.1774_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_igaboja", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250677", "accession": "AY903925.1.1772_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	2.0

id	8825250a-1704-4542-bf21-74aae8443b57
scientificName	Pyura
eventDate	2024-02-28
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-194
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pyura", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103524", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Metandrocarpa_taylori", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250836", "accession": "AY903922.1.1772_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_roretzi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250680", "accession": "AB013016.1.1751_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Cnemidocarpa_finmarkiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103870", "accession": "L12413.1.1763_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Pyura_haustor", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251266", "accession": "AY903926.1.1774_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_igaboja", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250677", "accession": "AY903925.1.1772_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	1.0

Halocynthia roretzi in Fiji

Status

Halocynthia roretzi does not have an offial status in Fiji.

Notes

No notes found.