| Occurrences: |
view occurrences
| id |
0193d761-e2b5-4dd5-adeb-4e5a21754bc7
|
| scientificName |
Suberites
|
| eventDate |
2022-02-16
|
| decimalLongitude |
178.425933
|
| decimalLatitude |
-18.1293
|
| materialSampleID |
S22
|
| target_gene |
18S
|
| DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTCGGGGCAGCCTGTCTGGTCCGCCGCAAGGCGTGTACTGGTCAGCCGCCCTTCCTCTCGAAAGCCCCGACTGCTCTTCATTGTAGTGGTCGGGTAGTTCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGCT
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Suberites sp.",
"confidence": 0.83
},
{
"method": "VSEARCH",
"scientificName": "Suberites_sp.",
"accession": "KC902367.1.1727_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Suberites_sp.",
"accession": "KC902212.1.1719_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Rhizaxinella_sp.",
"accession": "EF654531.1.1648_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Suberites_aurantiacus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:170835",
"accession": "KC902366.1.1719_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Suberites_aurantiacus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:170835",
"accession": "KC902192.1.1719_U",
"identity": 0.995,
"query_cover": 0.9952
}
]
}
|
| organismQuantity |
13.0
|
| id |
f348aab1-4913-4c13-b088-5e60877764ea
|
| scientificName |
Suberites
|
| eventDate |
2022-02-16
|
| decimalLongitude |
178.425933
|
| decimalLatitude |
-18.1293
|
| materialSampleID |
S21
|
| target_gene |
18S
|
| DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTCGGGGCAGCCTGTCTGGTCCGCCGCAAGGCGTGTACTGGTCAGCCGCCCTTCCTCTCGAAAGCCCCGACTGCTCTTCATTGTAGTGGTCGGGTAGTTCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGCT
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Suberites sp.",
"confidence": 0.83
},
{
"method": "VSEARCH",
"scientificName": "Suberites_sp.",
"accession": "KC902367.1.1727_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Suberites_sp.",
"accession": "KC902212.1.1719_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Rhizaxinella_sp.",
"accession": "EF654531.1.1648_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Suberites_aurantiacus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:170835",
"accession": "KC902366.1.1719_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Suberites_aurantiacus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:170835",
"accession": "KC902192.1.1719_U",
"identity": 0.995,
"query_cover": 0.9952
}
]
}
|
| organismQuantity |
1.0
|
|