PacMAN decision support system

Potential detection of Phallusia nigra in Fiji

Description:

Potential detection of Phallusia nigra with confidence medium on 2023-08-15 in material sample USP-24-01-58, marker 18S

Confidence:

medium

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Phallusia nigra
Chordata > Ascidiacea > Phlebobranchia > Ascidiidae
WoRMS: 103725

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

1.0

Reads:

148.0

Names:

1

Occurrences:

view occurrences

id	5851b664-7470-4daf-8426-2661e26402bf
scientificName	Phallusia nigra
AphiaID	103725
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-58
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGCACCTGGCCCTCGCCCCCGGCGCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Phallusia nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268455.1.1746_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268456.1.1746_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268457.1.1758_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268458.1.1766_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268459.1.1757_U", "identity": 1, "query_cover": 0.9952 } ] }
organismQuantity	148.0

id	aa19c972-96f6-421c-bdc8-7c4c1acdab9c
scientificName	Phallusia nigra
AphiaID	103725
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-59
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGCACCTGGCCCTCGCCCCCGGCGCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Phallusia nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268455.1.1746_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268456.1.1746_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268457.1.1758_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268458.1.1766_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268459.1.1757_U", "identity": 1, "query_cover": 0.9952 } ] }
organismQuantity	90.0

id	d5ddac34-5e17-4ce7-a11a-526c6f052de6
scientificName	Phallusia nigra
AphiaID	103725
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-57
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGCACCTGGCCCTCGCCCCCGGCGCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Phallusia nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268455.1.1746_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268456.1.1746_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268457.1.1758_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268458.1.1766_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268459.1.1757_U", "identity": 1, "query_cover": 0.9952 } ] }
organismQuantity	27.0

id	01a8a0b6-f67a-41a2-83c5-4c562da9f933
scientificName	Phallusia nigra
AphiaID	103725
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-54
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGCACCTGGCCCTCGCCCCCGGCGCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Phallusia nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268455.1.1746_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268456.1.1746_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268457.1.1758_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268458.1.1766_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268459.1.1757_U", "identity": 1, "query_cover": 0.9952 } ] }
organismQuantity	22.0

id	119a8d22-08a5-4d10-8f0d-aa8da7ac9c4f
scientificName	Phallusia nigra
AphiaID	103725
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-49
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGCACCTGGCCCTCGCCCCCGGCGCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Phallusia nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268455.1.1746_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268456.1.1746_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268457.1.1758_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268458.1.1766_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268459.1.1757_U", "identity": 1, "query_cover": 0.9952 } ] }
organismQuantity	4.0

id	c537f908-6e48-4118-9556-3e84b3bd5fb8
scientificName	Phallusia nigra
AphiaID	103725
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-38
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGCACCTGGCCCTCGCCCCCGGCGCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Phallusia nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268455.1.1746_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268456.1.1746_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268457.1.1758_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268458.1.1766_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268459.1.1757_U", "identity": 1, "query_cover": 0.9952 } ] }
organismQuantity	2.0

id	d24137a4-1bcc-4abf-9927-f6a0c62d5ad2
scientificName	Phallusia nigra
AphiaID	103725
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-36
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGCACCTGGCCCTCGCCCCCGGCGCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Phallusia nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268455.1.1746_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268456.1.1746_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268457.1.1758_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268458.1.1766_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268459.1.1757_U", "identity": 1, "query_cover": 0.9952 } ] }
organismQuantity	1.0

id	03acacc9-a8e7-4074-9b5b-0981125668ce
scientificName	Phallusia
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-55
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACGGACGGGGGCATTCGTACTGTGCCGTTAGAGGTGAAATTCTTGGATCGGCGCAAGACTAACGACTGCGAAAGCATTTGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Phallusia", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103485", "confidence": 0.82 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "FM244845.1.1805_U", "identity": 0.994, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ascidia_sydneiensis_samea", "accession": "AF165819.1.1065_U", "identity": 0.994, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ascidia_ceratodes", "scientificNameID": "urn:lsid:marinespecies.org:taxname:249976", "accession": "L12378.1.1821_U", "identity": 0.994, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Corella_eumyota", "scientificNameID": "urn:lsid:marinespecies.org:taxname:173223", "accession": "FM244846.1.1733_U", "identity": 0.994, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268455.1.1746_U", "identity": 0.994, "query_cover": 0.9938 } ] }
organismQuantity	1.0

id	07009c9d-9563-481b-bd24-0dac6f0484e7
scientificName	Phallusia
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-58
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACGGACGGGGGCATTCGTACTGTGCCGTTAGAGGTGAAATTCTTGGATCGGCGCAAGACTAACGACTGCGAAAGCATTTGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Phallusia", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103485", "confidence": 0.82 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "FM244845.1.1805_U", "identity": 0.994, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ascidia_sydneiensis_samea", "accession": "AF165819.1.1065_U", "identity": 0.994, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ascidia_ceratodes", "scientificNameID": "urn:lsid:marinespecies.org:taxname:249976", "accession": "L12378.1.1821_U", "identity": 0.994, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Corella_eumyota", "scientificNameID": "urn:lsid:marinespecies.org:taxname:173223", "accession": "FM244846.1.1733_U", "identity": 0.994, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268455.1.1746_U", "identity": 0.994, "query_cover": 0.9938 } ] }
organismQuantity	1.0

Phallusia nigra in Fiji

Status

Phallusia nigra does not have an offial status in Fiji.

Notes

No notes found.