PacMAN decision support system

Potential detection of Symplegma brakenhielmi in Fiji

Description:

Potential detection of Symplegma brakenhielmi with confidence low on 2023-11-28 in material sample USP-24-01-169, marker COI

Confidence:

low

Risk:

medium view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Symplegma brakenhielmi
Chordata > Ascidiacea > Stolidobranchia > Styelidae
WoRMS: 251435

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

Reads:

2806.0

Names:

Occurrences:

view occurrences

id	01d01916-271a-4abc-bdef-40972f769b9a
scientificName	Symplegma brakenhielmi
AphiaID	251435
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
eventID	SUVA3_20231128_S2A
materialSampleID	USP-24-01-169
target_gene	COI
DNA_sequence	TCTTTCTAGGAACTTAGCTCATTCTAGGGCTGCCCTTGATTGTGCTATTTTTTCTTTACATTTGGCAAGGGTTTCTAGTATTTTGAGATCTTTGAATTTTATGACTACTTTGTTTAATATAAAGAGTAAAGGATGAAGGTTATTTAATATGTCTTTGTTTTGTTGGACTGTTTTAGTTACTACTGTCTTGTTGCTTTTGTCCTTGCCGGTTTTGGCAGCTGCTATTACTATGTTGTTGTTTGATCGTAATTTTAATTCTTCTTTTTTTGATCCTTCTGGTGGAGGAGATCCTGTTCTTTATCAGCATTTATTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Symplegma brakenhielmi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251435", "confidence": 0.87 } ] }
organismQuantity	2806.0

id	cc42f371-ae2e-43b6-a1e2-51480252c778
scientificName	Symplegma brakenhielmi
AphiaID	251435
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
eventID	SUVA3_20231128_S3C
materialSampleID	USP-24-01-174
target_gene	COI
DNA_sequence	TCTTTCTAGGAACTTAGCTCATTCTAGGGCTGCCCTTGATTGTGCTATTTTTTCTTTACATTTGGCAAGGGTTTCTAGTATTTTGAGATCTTTGAATTTTATGACTACTTTGTTTAATATAAAGAGTAAAGGATGAAGGTTATTTAATATGTCTTTGTTTTGTTGGACTGTTTTAGTTACTACTGTCTTGTTGCTTTTGTCCTTGCCGGTTTTGGCAGCTGCTATTACTATGTTGTTGTTTGATCGTAATTTTAATTCTTCTTTTTTTGATCCTTCTGGTGGAGGAGATCCTGTTCTTTATCAGCATTTATTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Symplegma brakenhielmi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251435", "confidence": 0.87 } ] }
organismQuantity	457.0

id	3dc5c11d-501a-4663-8a52-7117ad720022
scientificName	Symplegma brakenhielmi
AphiaID	251435
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
eventID	SUVA3_20231128_S3A
materialSampleID	USP-24-01-172
target_gene	COI
DNA_sequence	TCTTTCTAGGAACTTAGCTCATTCTAGGGCTGCCCTTGATTGTGCTATTTTTTCTTTACATTTGGCAAGGGTTTCTAGTATTTTGAGATCTTTGAATTTTATGACTACTTTGTTTAATATAAAGAGTAAAGGATGAAGGTTATTTAATATGTCTTTGTTTTGTTGGACTGTTTTAGTTACTACTGTCTTGTTGCTTTTGTCCTTGCCGGTTTTGGCAGCTGCTATTACTATGTTGTTGTTTGATCGTAATTTTAATTCTTCTTTTTTTGATCCTTCTGGTGGAGGAGATCCTGTTCTTTATCAGCATTTATTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Symplegma brakenhielmi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251435", "confidence": 0.87 } ] }
organismQuantity	364.0

id	7986b6eb-c3d5-43e9-aafb-5345dd64e826
scientificName	Symplegma brakenhielmi
AphiaID	251435
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
eventID	SUVA3_20231128_S2B
materialSampleID	USP-24-01-170
target_gene	COI
DNA_sequence	TCTTTCTAGGAACTTAGCTCATTCTAGGGCTGCCCTTGATTGTGCTATTTTTTCTTTACATTTGGCAAGGGTTTCTAGTATTTTGAGATCTTTGAATTTTATGACTACTTTGTTTAATATAAAGAGTAAAGGATGAAGGTTATTTAATATGTCTTTGTTTTGTTGGACTGTTTTAGTTACTACTGTCTTGTTGCTTTTGTCCTTGCCGGTTTTGGCAGCTGCTATTACTATGTTGTTGTTTGATCGTAATTTTAATTCTTCTTTTTTTGATCCTTCTGGTGGAGGAGATCCTGTTCTTTATCAGCATTTATTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Symplegma brakenhielmi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251435", "confidence": 0.87 } ] }
organismQuantity	9.0

id	3385a7c9-a949-4a7d-8fa0-53c0d4d0033c
scientificName	Symplegma brakenhielmi
AphiaID	251435
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
eventID	SUVA3_20231128_WC
materialSampleID	USP-24-01-165
target_gene	COI
DNA_sequence	TCTTTCTAGGAACTTAGCTCATTCTAGGGCTGCCCTTGATTGTGCTATTTTTTCTTTACATTTGGCAAGGGTTTCTAGTATTTTGAGATCTTTGAATTTTATGACTACTTTGTTTAATATAAAGAGTAAAGGATGAAGGTTATTTAATATGTCTTTGTTTTGTTGGACTGTTTTAGTTACTACTGTCTTGTTGCTTTTGTCCTTGCCGGTTTTGGCAGCTGCTATTACTATGTTGTTGTTTGATCGTAATTTTAATTCTTCTTTTTTTGATCCTTCTGGTGGAGGAGATCCTGTTCTTTATCAGCATTTATTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Symplegma brakenhielmi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251435", "confidence": 0.87 } ] }
organismQuantity	3.0

id	da3c8a8b-f2b8-4048-bf16-5e4fa1fe6a34
scientificName	Symplegma brakenhielmi
AphiaID	251435
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
eventID	SUVA3_20231128_WB
materialSampleID	USP-24-01-164
target_gene	COI
DNA_sequence	TCTTTCTAGGAACTTAGCTCATTCTAGGGCTGCCCTTGATTGTGCTATTTTTTCTTTACATTTGGCAAGGGTTTCTAGTATTTTGAGATCTTTGAATTTTATGACTACTTTGTTTAATATAAAGAGTAAAGGATGAAGGTTATTTAATATGTCTTTGTTTTGTTGGACTGTTTTAGTTACTACTGTCTTGTTGCTTTTGTCCTTGCCGGTTTTGGCAGCTGCTATTACTATGTTGTTGTTTGATCGTAATTTTAATTCTTCTTTTTTTGATCCTTCTGGTGGAGGAGATCCTGTTCTTTATCAGCATTTATTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Symplegma brakenhielmi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251435", "confidence": 0.87 } ] }
organismQuantity	3.0

Symplegma brakenhielmi does not have an offial status in Fiji.

No notes found.