PacMAN decision support system

Potential detection of Alectryonella plicatula in Fiji

Description:

Potential detection of Alectryonella plicatula with confidence low on 2023-08-15 in material sample USP-24-01-154, marker COI

Confidence:

low

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Alectryonella plicatula
Mollusca > Bivalvia > Ostreida > Ostreidae
WoRMS: 506699

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

1.0

Reads:

2.0

Names:

Occurrences:

view occurrences

id	8cad9d2f-9419-41e2-a261-e66c94569691
scientificName	Alectryonella plicatula
AphiaID	506699
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
eventID	SUVA3_20230815_S3B
materialSampleID	USP-24-01-154
target_gene	COI
DNA_sequence	TTTATCTACTTTTTCTTATCATGGGATGTGTATAGATTTGGCTATTTTAAGGCTTCATTTAGCTGGTATTAGTTCAATTTTTAGGTCGATTAATTTTATAGTAACTATCACTAATATACGGTCAGTAGATGGGCATTTACTAGCTTTATTCCCTTGGTCAATTAAGGTGACTTCTTTCTTGTTACTTACGACTTTGCCGG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Alectryonella plicatula", "scientificNameID": "urn:lsid:marinespecies.org:taxname:506699", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Alectryonella plicatula", "scientificNameID": "urn:lsid:marinespecies.org:taxname:506699", "accession": "MT620773", "identity": 1, "query_cover": 0.995 } ] }
organismQuantity	2.0

id	6f84d6ec-c5ff-4588-a583-e520962d25ca
scientificName	Alectryonella plicatula
AphiaID	506699
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
eventID	SUVA3_20230815_S3B
materialSampleID	USP-24-01-154
target_gene	COI
DNA_sequence	TTTATCTACTTTTTCTTATCATGGGATGTGTATAGATTTGGCTATTTTAAGGCTTCATTTAGCTGGTATTAGTTCAATTTTTAGGTCGATTAATTTTATAGTAACTATCACTAATATACGGTCAGTAGATGGGCATTTACTAGCTTTATTCCCTTGGTCAATTAAGGTGACTTCTTTCTTGTTACTTACGACTTTGCCGGTATTAGCTGGTGGGTTGACTATACTGTTAACAGATCGACATTTTAATACTTCTTTTTTTGACCCAGTAGGTGGTGGAGACCCTGTTTTATTCCAGCATTTATTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Alectryonella plicatula", "scientificNameID": "urn:lsid:marinespecies.org:taxname:506699", "confidence": 1 } ] }
organismQuantity	2666.0

id	01d45cfa-fd4f-4750-885b-2d7aab001e0d
scientificName	Alectryonella plicatula
AphiaID	506699
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
eventID	SUVA3_20230815_S3B
materialSampleID	USP-24-01-154
target_gene	COI
DNA_sequence	TTTATCTACTTTTTCTTATCATGGGATGTGTATAGATTTGGCTATTTTAAGGCTTCATTTAGCTGGTATTAGTTCAATTTTTAGGTCGATTAATTTTATAGTAACTATCACTAATATACGGTCAGTAGATGGGCATTTACTAGCTTTATTCCCTTGGTCAATTAAGGTGACTTCTTTCTTGTTACTTACGACTTTGCCGGTATTAGCTGGTGGGTTGACTATGCTGTTAACAGATCGACATTTTAATACTTCTTTTTTTGACCCAGTAGGTGGTGGAGACCCTGTTTTATTCCAGCATTTATTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Alectryonella plicatula", "scientificNameID": "urn:lsid:marinespecies.org:taxname:506699", "confidence": 1 } ] }
organismQuantity	478.0

id	921191e3-61b5-4e64-aebe-3e002e4a3dde
scientificName	Alectryonella plicatula
AphiaID	506699
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
eventID	SUVA3_20230815_S3A
materialSampleID	USP-24-01-153
target_gene	COI
DNA_sequence	TTTATCTACTTTTTCTTATCATGGGATGTGTATAGATTTGGCTATTTTAAGGCTTCATTTAGCTGGTATTAGTTCAATTTTTAGGTCGATTAATTTTATAGTAACTATCACTAATATACGGTCAGTAGATGGGCATTTACTAGCTTTATTCCCTTGGTCAATTAAGGTGACTTCTTTCTTGTTACTTACGACTTTGCCGGTATTAGCTGGTGGGTTGACTATACTGTTAACAGATCGACATTTTAATACTTCTTTTTTTGACCCAGTAGGTGGTGGAGACCCTGTTTTATTCCAGCATTTATTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Alectryonella plicatula", "scientificNameID": "urn:lsid:marinespecies.org:taxname:506699", "confidence": 1 } ] }
organismQuantity	39.0

id	a91f1b94-15c5-4c93-9a12-8ffd97275352
scientificName	Alectryonella plicatula
AphiaID	506699
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
eventID	SUVA3_20230815_S3B
materialSampleID	USP-24-01-154
target_gene	COI
DNA_sequence	TTTATCTACTTTTTCTTATCATGGGATGTGTATAGATTTGGCTATTTTAAGGCTTCATTTAGCTGGTATTAGTTCAATTTTTAGGTCGATTAATTTTATAGTAACTATCACTAATATACGGTCAGTAGATGGGCATTTACTAGCTTTATTCCCTTGGTCAATTAAGGTGACTTCTTTCTTGTTACTTACGACTTTGCCGGTATTAGCTGGTGGGTTGACTATGCTGTTAACAGATCGACATTTTAATACTTCTTTTTTTGATCCAGTAGGTGGTGGAGACCCTGTTTTATTCCAGCATTTATTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Alectryonella plicatula", "scientificNameID": "urn:lsid:marinespecies.org:taxname:506699", "confidence": 1 } ] }
organismQuantity	13.0

id	7fe07e16-ef00-4577-aebb-471c1e6c76fb
scientificName	Alectryonella plicatula
AphiaID	506699
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
eventID	SUVA3_20230815_S3B
materialSampleID	USP-24-01-154
target_gene	COI
DNA_sequence	TGGTCAATTAAGGTGACTTCTTTCTTGTTACTTACGACTTTGCCGGTATTAGCTGGTGGGTTGACTATACTGTTAACAGATCGACATTTTAATACTTCTTTTTTTGACCCAGTAGGTGGTGGAGACCCTGTTTTATTCCAGCATTTATTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Alectryonella plicatula", "scientificNameID": "urn:lsid:marinespecies.org:taxname:506699", "confidence": 0.9 } ] }
organismQuantity	5.0

id	067fb2cf-cf92-46d3-a06f-9df57dab9841
scientificName	Alectryonella plicatula
AphiaID	506699
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
eventID	SUVA3_20230815_S2A
materialSampleID	USP-24-01-150
target_gene	COI
DNA_sequence	TTTATCTACTTTTTCTTATCATGGGATGTGTATAGATTTGGCTATTTTAAGGCTTCATTTAGCTGGTATTAGTTCAATTTTTAGGTCGATTAATTTTATAGTAACTATCACTAATATACGGTCAGTAGATGGGCATTTACTAGCTTTATTCCCTTGGTCAATTAAGGTGACTTCTTTCTTGTTACTTACGACTTTGCCGGTATTAGCTGGTGGGTTGACTATACTGTTAACAGATCGACATTTTAATACTTCTTTTTTTGACCCAGTAGGTGGTGGAGACCCTGTTTTATTCCAGCATTTATTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Alectryonella plicatula", "scientificNameID": "urn:lsid:marinespecies.org:taxname:506699", "confidence": 1 } ] }
organismQuantity	3.0

id	aa98f123-38ce-44cb-b2ed-2f1aa3cac38d
scientificName	Alectryonella plicatula
AphiaID	506699
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
eventID	SUVA3_20230815_S3B
materialSampleID	USP-24-01-154
target_gene	COI
DNA_sequence	TGGTCAATTAAGGTGACTTCTTTCTTGTTACTTACGACTTTGCCGGTATTAGCTGGTGGGTTGACTATGCTGTTAACAGATCGACATTTTAATACTTCTTTTTTTGATCCAGTAGGTGGTGGAGACCCTGTTTTATTCCAGCATTTATTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Alectryonella plicatula", "scientificNameID": "urn:lsid:marinespecies.org:taxname:506699", "confidence": 0.93 } ] }
organismQuantity	3.0

Alectryonella plicatula does not have an offial status in Fiji.

No notes found.