Occurrences: |
view occurrences
id |
2fbf3623-5ade-4fef-80b7-9b3925dda855
|
scientificName |
Symplegma
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
USP-24-01-56
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Symplegma",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:206885",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_reptans",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:251438",
"accession": "AF165826.1.1066_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_viride",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:212501",
"accession": "DQ346655.1.1765_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botryllus_planus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:215992",
"accession": "DQ346653.1.1798_U",
"identity": 0.976,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botrylloides_violacea",
"accession": "AY903927.1.1803_U",
"identity": 0.976,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botryllus_schlosseri",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103862",
"accession": "AB211066.1.1750_U",
"identity": 0.971,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
15934.0
|
id |
edfeb554-bedc-4ecd-804a-883118effd05
|
scientificName |
Symplegma
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
USP-24-01-58
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Symplegma",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:206885",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_reptans",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:251438",
"accession": "AF165826.1.1066_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_viride",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:212501",
"accession": "DQ346655.1.1765_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botryllus_planus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:215992",
"accession": "DQ346653.1.1798_U",
"identity": 0.976,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botrylloides_violacea",
"accession": "AY903927.1.1803_U",
"identity": 0.976,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botryllus_schlosseri",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103862",
"accession": "AB211066.1.1750_U",
"identity": 0.971,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
7152.0
|
id |
50ba078e-5116-46ea-bce6-cbc22bdde211
|
scientificName |
Symplegma
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
USP-24-01-55
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Symplegma",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:206885",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_reptans",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:251438",
"accession": "AF165826.1.1066_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_viride",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:212501",
"accession": "DQ346655.1.1765_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botryllus_planus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:215992",
"accession": "DQ346653.1.1798_U",
"identity": 0.976,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botrylloides_violacea",
"accession": "AY903927.1.1803_U",
"identity": 0.976,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botryllus_schlosseri",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103862",
"accession": "AB211066.1.1750_U",
"identity": 0.971,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
5724.0
|
id |
8a995892-f4cd-4406-873f-1ccf8bc02d3d
|
scientificName |
Symplegma
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
USP-24-01-57
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Symplegma",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:206885",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_reptans",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:251438",
"accession": "AF165826.1.1066_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_viride",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:212501",
"accession": "DQ346655.1.1765_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botryllus_planus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:215992",
"accession": "DQ346653.1.1798_U",
"identity": 0.976,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botrylloides_violacea",
"accession": "AY903927.1.1803_U",
"identity": 0.976,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botryllus_schlosseri",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103862",
"accession": "AB211066.1.1750_U",
"identity": 0.971,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
4241.0
|
id |
52771dfa-6799-40fb-b240-ba0af263e8cc
|
scientificName |
Symplegma
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
USP-24-01-54
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Symplegma",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:206885",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_reptans",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:251438",
"accession": "AF165826.1.1066_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_viride",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:212501",
"accession": "DQ346655.1.1765_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botryllus_planus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:215992",
"accession": "DQ346653.1.1798_U",
"identity": 0.976,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botrylloides_violacea",
"accession": "AY903927.1.1803_U",
"identity": 0.976,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botryllus_schlosseri",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103862",
"accession": "AB211066.1.1750_U",
"identity": 0.971,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
2607.0
|
id |
ac94f542-d499-4025-a111-945fe36ebb01
|
scientificName |
Symplegma
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
USP-24-01-59
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Symplegma",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:206885",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_reptans",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:251438",
"accession": "AF165826.1.1066_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_viride",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:212501",
"accession": "DQ346655.1.1765_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botryllus_planus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:215992",
"accession": "DQ346653.1.1798_U",
"identity": 0.976,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botrylloides_violacea",
"accession": "AY903927.1.1803_U",
"identity": 0.976,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botryllus_schlosseri",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103862",
"accession": "AB211066.1.1750_U",
"identity": 0.971,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
86.0
|
id |
803fea65-a285-479e-ab35-eff950238104
|
scientificName |
Symplegma
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
USP-24-01-37
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Symplegma",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:206885",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_reptans",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:251438",
"accession": "AF165826.1.1066_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_viride",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:212501",
"accession": "DQ346655.1.1765_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botryllus_planus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:215992",
"accession": "DQ346653.1.1798_U",
"identity": 0.976,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botrylloides_violacea",
"accession": "AY903927.1.1803_U",
"identity": 0.976,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botryllus_schlosseri",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103862",
"accession": "AB211066.1.1750_U",
"identity": 0.971,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
21.0
|
id |
21f31b2b-a733-4dc7-8395-1c0ff67c2f0b
|
scientificName |
Symplegma
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
USP-24-01-38
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Symplegma",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:206885",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_reptans",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:251438",
"accession": "AF165826.1.1066_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_viride",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:212501",
"accession": "DQ346655.1.1765_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botryllus_planus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:215992",
"accession": "DQ346653.1.1798_U",
"identity": 0.976,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botrylloides_violacea",
"accession": "AY903927.1.1803_U",
"identity": 0.976,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botryllus_schlosseri",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103862",
"accession": "AB211066.1.1750_U",
"identity": 0.971,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
17.0
|
id |
af569a85-fb71-4fe9-86e5-87eb1a2c9532
|
scientificName |
Symplegma
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
USP-24-01-50
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Symplegma",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:206885",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_reptans",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:251438",
"accession": "AF165826.1.1066_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_viride",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:212501",
"accession": "DQ346655.1.1765_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botryllus_planus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:215992",
"accession": "DQ346653.1.1798_U",
"identity": 0.976,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botrylloides_violacea",
"accession": "AY903927.1.1803_U",
"identity": 0.976,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botryllus_schlosseri",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103862",
"accession": "AB211066.1.1750_U",
"identity": 0.971,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
17.0
|
id |
f1a8017c-22d2-4ee0-92af-c8f0ad2a6eaf
|
scientificName |
Symplegma
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
USP-24-01-49
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Symplegma",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:206885",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_reptans",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:251438",
"accession": "AF165826.1.1066_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_viride",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:212501",
"accession": "DQ346655.1.1765_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botryllus_planus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:215992",
"accession": "DQ346653.1.1798_U",
"identity": 0.976,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botrylloides_violacea",
"accession": "AY903927.1.1803_U",
"identity": 0.976,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botryllus_schlosseri",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103862",
"accession": "AB211066.1.1750_U",
"identity": 0.971,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
16.0
|
id |
0d3c0525-a162-44cd-a5ce-9eb591c4cac4
|
scientificName |
Symplegma
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
USP-24-01-36
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Symplegma",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:206885",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_reptans",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:251438",
"accession": "AF165826.1.1066_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_viride",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:212501",
"accession": "DQ346655.1.1765_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botryllus_planus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:215992",
"accession": "DQ346653.1.1798_U",
"identity": 0.976,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botrylloides_violacea",
"accession": "AY903927.1.1803_U",
"identity": 0.976,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botryllus_schlosseri",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103862",
"accession": "AB211066.1.1750_U",
"identity": 0.971,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
12.0
|
id |
b6d2b6e3-0b05-43f1-8412-3beb01119040
|
scientificName |
Symplegma
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
USP-24-01-54
|
target_gene |
18S
|
DNA_sequence |
AGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCTGTTCGCCTGTATAGTGTTGCATG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Symplegma",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:206885",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_reptans",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:251438",
"accession": "AF165826.1.1066_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_viride",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:212501",
"accession": "DQ346655.1.1765_U",
"identity": 1,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
2.0
|
id |
41ac80b9-5824-4da4-a778-c8efdf804c14
|
scientificName |
Symplegma
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
USP-24-01-57
|
target_gene |
18S
|
DNA_sequence |
AGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCTGTTCGCCTGTATAGTGTTGCATG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Symplegma",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:206885",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_reptans",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:251438",
"accession": "AF165826.1.1066_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_viride",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:212501",
"accession": "DQ346655.1.1765_U",
"identity": 1,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
1.0
|
id |
42cce688-6b9a-40d3-bff9-a7989a24f27a
|
scientificName |
Symplegma
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
USP-24-01-56
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAGGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Symplegma",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:206885",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_reptans",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:251438",
"accession": "AF165826.1.1066_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_viride",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:212501",
"accession": "DQ346655.1.1765_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botryllus_planus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:215992",
"accession": "DQ346653.1.1798_U",
"identity": 0.971,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botrylloides_violacea",
"accession": "AY903927.1.1803_U",
"identity": 0.971,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
77.0
|
id |
01fc60c9-c54e-4127-8672-eb022faf9618
|
scientificName |
Symplegma
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
USP-24-01-58
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAGGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Symplegma",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:206885",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_reptans",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:251438",
"accession": "AF165826.1.1066_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_viride",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:212501",
"accession": "DQ346655.1.1765_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botryllus_planus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:215992",
"accession": "DQ346653.1.1798_U",
"identity": 0.971,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botrylloides_violacea",
"accession": "AY903927.1.1803_U",
"identity": 0.971,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
42.0
|
id |
24e72ba2-8fff-4d8f-b6e4-182fcbcb611a
|
scientificName |
Symplegma
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
USP-24-01-55
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAGGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Symplegma",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:206885",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_reptans",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:251438",
"accession": "AF165826.1.1066_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_viride",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:212501",
"accession": "DQ346655.1.1765_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botryllus_planus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:215992",
"accession": "DQ346653.1.1798_U",
"identity": 0.971,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botrylloides_violacea",
"accession": "AY903927.1.1803_U",
"identity": 0.971,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
29.0
|
id |
589c7638-0dab-4469-8ab3-2e974d0fdc31
|
scientificName |
Symplegma
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
USP-24-01-58
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCCGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Symplegma",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:206885",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_reptans",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:251438",
"accession": "AF165826.1.1066_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_viride",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:212501",
"accession": "DQ346655.1.1765_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botryllus_planus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:215992",
"accession": "DQ346653.1.1798_U",
"identity": 0.971,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botrylloides_violacea",
"accession": "AY903927.1.1803_U",
"identity": 0.971,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
29.0
|
id |
67925c5d-6b7d-4dca-8a66-1bb8cba318f0
|
scientificName |
Symplegma
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
USP-24-01-57
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAGGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Symplegma",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:206885",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_reptans",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:251438",
"accession": "AF165826.1.1066_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_viride",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:212501",
"accession": "DQ346655.1.1765_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botryllus_planus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:215992",
"accession": "DQ346653.1.1798_U",
"identity": 0.971,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botrylloides_violacea",
"accession": "AY903927.1.1803_U",
"identity": 0.971,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
23.0
|
id |
dd951f1d-b133-407a-8f37-2b6567d4565a
|
scientificName |
Symplegma
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
USP-24-01-56
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCCGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Symplegma",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:206885",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_reptans",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:251438",
"accession": "AF165826.1.1066_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_viride",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:212501",
"accession": "DQ346655.1.1765_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botryllus_planus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:215992",
"accession": "DQ346653.1.1798_U",
"identity": 0.971,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botrylloides_violacea",
"accession": "AY903927.1.1803_U",
"identity": 0.971,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
15.0
|
id |
da07e654-bde2-4c87-ade9-7900efd9e4cf
|
scientificName |
Symplegma
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
USP-24-01-54
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCCGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Symplegma",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:206885",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_reptans",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:251438",
"accession": "AF165826.1.1066_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_viride",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:212501",
"accession": "DQ346655.1.1765_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botryllus_planus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:215992",
"accession": "DQ346653.1.1798_U",
"identity": 0.971,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botrylloides_violacea",
"accession": "AY903927.1.1803_U",
"identity": 0.971,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
11.0
|
id |
0862480c-481e-4c51-88b9-4417818bf164
|
scientificName |
Symplegma
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
USP-24-01-54
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAGGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Symplegma",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:206885",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_reptans",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:251438",
"accession": "AF165826.1.1066_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_viride",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:212501",
"accession": "DQ346655.1.1765_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botryllus_planus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:215992",
"accession": "DQ346653.1.1798_U",
"identity": 0.971,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botrylloides_violacea",
"accession": "AY903927.1.1803_U",
"identity": 0.971,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
10.0
|
id |
4920fd18-a73e-49db-9fc1-3fa4d0262dd9
|
scientificName |
Symplegma
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
USP-24-01-57
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCCGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Symplegma",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:206885",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_reptans",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:251438",
"accession": "AF165826.1.1066_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_viride",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:212501",
"accession": "DQ346655.1.1765_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botryllus_planus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:215992",
"accession": "DQ346653.1.1798_U",
"identity": 0.971,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botrylloides_violacea",
"accession": "AY903927.1.1803_U",
"identity": 0.971,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
4.0
|
id |
c807999e-7c13-4293-a101-384b264c617a
|
scientificName |
Symplegma
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
USP-24-01-55
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCCGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Symplegma",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:206885",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_reptans",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:251438",
"accession": "AF165826.1.1066_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_viride",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:212501",
"accession": "DQ346655.1.1765_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botryllus_planus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:215992",
"accession": "DQ346653.1.1798_U",
"identity": 0.971,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botrylloides_violacea",
"accession": "AY903927.1.1803_U",
"identity": 0.971,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
3.0
|
id |
9684e635-470b-4842-8498-17fdc09d7f63
|
scientificName |
Symplegma
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
USP-24-01-49
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAGGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Symplegma",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:206885",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_reptans",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:251438",
"accession": "AF165826.1.1066_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_viride",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:212501",
"accession": "DQ346655.1.1765_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botryllus_planus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:215992",
"accession": "DQ346653.1.1798_U",
"identity": 0.971,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botrylloides_violacea",
"accession": "AY903927.1.1803_U",
"identity": 0.971,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
1.0
|
id |
a2c0cf07-df39-4968-bd32-6eeb0a5348b1
|
scientificName |
Symplegma
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
USP-24-01-38
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAGGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Symplegma",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:206885",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_reptans",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:251438",
"accession": "AF165826.1.1066_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_viride",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:212501",
"accession": "DQ346655.1.1765_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botryllus_planus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:215992",
"accession": "DQ346653.1.1798_U",
"identity": 0.971,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Botrylloides_violacea",
"accession": "AY903927.1.1803_U",
"identity": 0.971,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
1.0
|
id |
e7c92b44-512e-464b-81c8-a0da3ef0cc9f
|
scientificName |
Symplegma
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
USP-24-01-56
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCAGTGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Symplegma",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:206885",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_reptans",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:251438",
"accession": "AF165826.1.1066_U",
"identity": 0.99,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_viride",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:212501",
"accession": "DQ346655.1.1765_U",
"identity": 0.99,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
29.0
|
id |
c09cbdab-a875-41a9-be4e-cf89e639c781
|
scientificName |
Symplegma
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
USP-24-01-54
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCAGTGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Symplegma",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:206885",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_reptans",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:251438",
"accession": "AF165826.1.1066_U",
"identity": 0.99,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_viride",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:212501",
"accession": "DQ346655.1.1765_U",
"identity": 0.99,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
24.0
|
id |
0d7cc855-babd-4355-af8f-0706f73015f9
|
scientificName |
Symplegma
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
USP-24-01-57
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCAGTGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Symplegma",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:206885",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_reptans",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:251438",
"accession": "AF165826.1.1066_U",
"identity": 0.99,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_viride",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:212501",
"accession": "DQ346655.1.1765_U",
"identity": 0.99,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
22.0
|
id |
10e4b637-14ae-41fb-b0a6-fac6986fd615
|
scientificName |
Symplegma
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
USP-24-01-58
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCAGTGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Symplegma",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:206885",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_reptans",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:251438",
"accession": "AF165826.1.1066_U",
"identity": 0.99,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_viride",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:212501",
"accession": "DQ346655.1.1765_U",
"identity": 0.99,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
17.0
|
id |
18b2f5b5-d09c-4b80-bac2-6fdccfeb95ef
|
scientificName |
Symplegma
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
USP-24-01-55
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCAGTGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Symplegma",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:206885",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_reptans",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:251438",
"accession": "AF165826.1.1066_U",
"identity": 0.99,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_viride",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:212501",
"accession": "DQ346655.1.1765_U",
"identity": 0.99,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
2.0
|
id |
e6da4593-0ec1-47bf-8c65-fa526d5c3c75
|
scientificName |
Symplegma
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
USP-24-01-37
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCAGTGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Symplegma",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:206885",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_reptans",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:251438",
"accession": "AF165826.1.1066_U",
"identity": 0.99,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Symplegma_viride",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:212501",
"accession": "DQ346655.1.1765_U",
"identity": 0.99,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
1.0
|
|