| Occurrences: |
view occurrences
| id |
234705a7-c4b9-4a0f-be10-45cf2ad83003
|
| scientificName |
Discodoris concinna
|
| AphiaID |
139562
|
| eventDate |
2023-08-24
|
| decimalLongitude |
178.4255
|
| decimalLatitude |
-18.13163
|
| materialSampleID |
USP-24-01-44
|
| target_gene |
18S
|
| DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGCGCAGGCGGGCGGTCCGGCTCGCGCCGGCTCGCCGCCCGTTGACCTGCCCCACCCCTGCCGGCTCCCTCCCGGCGGTGCTCTTCGCTGAGCGTCCCGGGTGGCCGGCGCGTTTACTTTGAAAAAATTAGAGTGTTC
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Discodoris concinna",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:139562",
"confidence": 0.89
},
{
"method": "VSEARCH",
"scientificName": "Discodoris concinna",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:139562",
"accession": "AF249213.1.1900_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Rostanga muscula",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:599221",
"accession": "GQ326863.1.1826_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Diaulula sandiegensis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:536817",
"accession": "GQ326865.1.1832_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Diaulula sp.",
"accession": "AY145374.1.1910_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Discodoris concinna",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:139562",
"accession": "AJ224781.1.1902_U",
"identity": 0.995,
"query_cover": 0.9952
}
]
}
|
| organismQuantity |
5.0
|
| id |
026c5ce8-94f1-4d2a-9c1e-4bcd3b86d5e6
|
| scientificName |
Discodoris concinna
|
| AphiaID |
139562
|
| eventDate |
2023-08-24
|
| decimalLongitude |
178.4255
|
| decimalLatitude |
-18.13163
|
| materialSampleID |
USP-24-01-43
|
| target_gene |
18S
|
| DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGCGCAGGCGGGCGGTCCGGCTCGCGCCGGCTCGCCGCCCGTTGACCTGCCCCACCCCTGCCGGCTCCCTCCCGGCGGTGCTCTTCGCTGAGCGTCCCGGGTGGCCGGCGCGTTTACTTTGAAAAAATTAGAGTGTTC
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Discodoris concinna",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:139562",
"confidence": 0.89
},
{
"method": "VSEARCH",
"scientificName": "Discodoris concinna",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:139562",
"accession": "AF249213.1.1900_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Rostanga muscula",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:599221",
"accession": "GQ326863.1.1826_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Diaulula sandiegensis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:536817",
"accession": "GQ326865.1.1832_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Diaulula sp.",
"accession": "AY145374.1.1910_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Discodoris concinna",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:139562",
"accession": "AJ224781.1.1902_U",
"identity": 0.995,
"query_cover": 0.9952
}
]
}
|
| organismQuantity |
1.0
|
|