Occurrences: |
view occurrences
id |
02df9a73-adad-4a83-8513-102c9d5492a3
|
scientificName |
Dendostrea sandvichensis
|
AphiaID |
506713
|
eventDate |
2023-11-28
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
eventID |
SUVA3_20231128_S2C
|
materialSampleID |
USP-24-01-171
|
target_gene |
COI
|
DNA_sequence |
TTTATCTACTTTCTCATATCATGGAATGTGCATGGACTTGGCTATTTTGAGACTTCACTTAGCTGGTATTAGATCAATTTTTAGGTCAATTAACTTTATGGTGACAATTACTAATATACGATCAGTAGATGGCCATTTATTGGCTTTGTTTCCTTGATCTATTAAAGTGACTTCATTTTTATTACTTACCACTCTTCCAG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"confidence": 0.99
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea sandvichensis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:506713",
"accession": "MN608290",
"identity": 0.995,
"query_cover": 0.995
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683510",
"identity": 0.99,
"query_cover": 0.995
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683511",
"identity": 0.99,
"query_cover": 0.995
}
]
}
|
organismQuantity |
5.0
|
id |
792f1ab5-943f-48a3-ab92-9ca0d03319e6
|
scientificName |
Dendostrea sandvichensis
|
AphiaID |
506713
|
eventDate |
2023-11-28
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
eventID |
SUVA3_20231128_S2C
|
materialSampleID |
USP-24-01-171
|
target_gene |
COI
|
DNA_sequence |
TTTATCTACTTTCTCATATCATGGAATGTGCATGGACTTGGCTATTTTGAGACTTCACTTAGCTGGTATTAGATCAATCTTTAGGTCAATTAACTTTATGGTGACAATTACTAATATACGATCAGTAGATGGCCATTTATTGGCTTTGTTTCCTTGATCTATTAAAGTGACTTCATTTTTATTACTTACCACTCTTCCAGTATTGGCTGGTGGGTTGACTATGTTACTGACGGACCGACATTTTAATACTTCTTTCTTCGATCCGGTAGGAGGTGGTGATCCGGTCTTATTTCAGCATTTATTC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683510",
"identity": 0.977,
"query_cover": 0.9967
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683511",
"identity": 0.977,
"query_cover": 0.9967
}
]
}
|
organismQuantity |
2706.0
|
id |
1b49cb93-f16a-4b1e-8cba-37f81b55f154
|
scientificName |
Dendostrea sandvichensis
|
AphiaID |
506713
|
eventDate |
2023-11-28
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
eventID |
SUVA3_20231128_S2C
|
materialSampleID |
USP-24-01-171
|
target_gene |
COI
|
DNA_sequence |
TTTATCTACTTTCTCATATCATGGAATGTGTATGGACTTGGCTATTTTGAGACTTCACTTAGCTGGTATTAGATCAATTTTTAGGTCAATTAACTTTATGGTGACAATTACTAATATACGATCAGTAGATGGCCATTTATTGGCTTTGTTTCCTTGATCTATTAAAGTGACTTCATTTTTATTACTTACCACTCTTCCAGTATTGGCTGGCGGGTTGACTATGTTACTGACGGATCGGCATTTTAATACTTCTTTCTTCGATCCAGTAGGAGGTGGTGATCCGGTCTTATTTCAGCATTTATTC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683510",
"identity": 0.99,
"query_cover": 0.9967
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683511",
"identity": 0.99,
"query_cover": 0.9967
}
]
}
|
organismQuantity |
2260.0
|
id |
b79b6821-7009-40c1-91dc-313fe16b8ae3
|
scientificName |
Dendostrea sandvichensis
|
AphiaID |
506713
|
eventDate |
2023-11-28
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
eventID |
SUVA3_20231128_PC
|
materialSampleID |
USP-24-01-186
|
target_gene |
COI
|
DNA_sequence |
TTTATCTACTTTCTCATATCATGGAATGTGCATGGACTTGGCTATTTTGAGACTTCACTTAGCTGGTATTAGATCAATTTTTAGGTCAATTAACTTTATGGTGACAATTACTAATATACGATCAGTAGATGGCCATTTATTGGCTTTGTTTCCTTGATCTATTAAAGTGACTTCATTTTTATTACTTACCACTCTTCCAGTATTGGCTGGTGGGTTGACTATGTTACTGACGGACCGACATTTTAATACTTCTTTCTTCGATCCGGTAGGAGGTGGTGATCCGGTCTTATTTCAGCATTTATTC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683510",
"identity": 0.98,
"query_cover": 0.9967
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683511",
"identity": 0.98,
"query_cover": 0.9967
}
]
}
|
organismQuantity |
238.0
|
id |
9d2394fd-9705-4154-915a-4dfeef1095fb
|
scientificName |
Dendostrea sandvichensis
|
AphiaID |
506713
|
eventDate |
2023-11-28
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
eventID |
SUVA3_20231128_S2C
|
materialSampleID |
USP-24-01-171
|
target_gene |
COI
|
DNA_sequence |
TTTATCTACTTTCTCATATCATGGAATGTGTATGGACTTGGCTATTTTGAGACTTCACTTAGCTGGTATTAGATCAATTTTTAGGTCAATTAACTTTATGGTGACAATTACTAATATACGATCAGTAGATGGCCATTTATTGGCTTTGTTTCCTTGATCTATTAAAGTGACTTCATTTTTATTACTTACCACTCTTCCAGTATTGGCTGGTGGGTTGACTATGTTACTGACGGACCGACATTTTAATACTTCTTTCTTCGATCCGGTAGGAGGTGGTGATCCGGTCTTATTTCAGCATTTATTC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683510",
"identity": 0.984,
"query_cover": 0.9967
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683511",
"identity": 0.984,
"query_cover": 0.9967
}
]
}
|
organismQuantity |
26.0
|
id |
ec60d8a6-37c3-421d-9d2d-2f0f1e918854
|
scientificName |
Dendostrea sandvichensis
|
AphiaID |
506713
|
eventDate |
2023-11-28
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
eventID |
SUVA3_20231128_S2C
|
materialSampleID |
USP-24-01-171
|
target_gene |
COI
|
DNA_sequence |
TTTATCTACTTTCTCATATCATGGAATGTGCATGGACTTGGCTATTTTGAGACTTCACTTAGCTGGTATTAGATCAATTTTTAGGTCAATTAACTTTATGGTGACAATTACTAATATACGATCAGTAGATGGCCATTTATTGGCTTTGTTTCCTTGATCTATTAAAGTGACTTCATTTTTATTACTTACCACTCTTCCAGTATTGGCTGGTGGGTTGACTATGTTACTGACGGACCGACATTTTAATACTTCTTTCTTCGATCCGGTAGGAGGTGGTGATCCGGTCTTATTTCAGCATTTATTC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683510",
"identity": 0.98,
"query_cover": 0.9967
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683511",
"identity": 0.98,
"query_cover": 0.9967
}
]
}
|
organismQuantity |
16.0
|
id |
66cc6866-2ad4-49b1-9691-00f40caf01ed
|
scientificName |
Dendostrea sandvichensis
|
AphiaID |
506713
|
eventDate |
2023-11-28
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
eventID |
SUVA3_20231128_S2C
|
materialSampleID |
USP-24-01-171
|
target_gene |
COI
|
DNA_sequence |
TGATCTATTAAAGTGACCTCATTTTTATTACTTACGACTCTTCCAGTATTGGCTGGTGGGCTGACTATGTTACTGACGGATCGACATTTTAATACTTCTTTCTTTGATCCGGTAGGGGGTGGTGATCCGGTCTTATTTCAGTATTTATTC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"confidence": 0.87
}
]
}
|
organismQuantity |
6.0
|
id |
8eeeb5d6-eaf4-4f25-80f9-6167dbd6c942
|
scientificName |
Dendostrea sandvichensis
|
AphiaID |
506713
|
eventDate |
2023-11-28
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
eventID |
SUVA3_20231128_WB
|
materialSampleID |
USP-24-01-164
|
target_gene |
COI
|
DNA_sequence |
TTTGTCTACTTTCTCATATCACGGAATGTGCATGGATTTGGCCATTTTAAGACTTCATTTAGCCGGAATTAGATCAATTTTTAGGTCAATTAACTTTGTAGTAACAATTACTAATATACGGTCAGTAGATGGCCACTTGTTAGCTTTATTTCCTTGGTCTATTAAAGTGACTTCATTTTTATTACTTACCACTCTTCCAGTCTTAGCTGGTGGGTTAACTATGTTACTGACAGATCGACATTTTAACACTTCTTTCTTTGACCCAGTAGGGGGTGGTGATCCGGTTTTATTCCAGCATTTATTC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"confidence": 0.81
}
]
}
|
organismQuantity |
6.0
|
id |
a43a1dc0-a8e6-4e3f-9114-a08634f74d58
|
scientificName |
Dendostrea sandvichensis
|
AphiaID |
506713
|
eventDate |
2023-11-28
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
eventID |
SUVA3_20231128_S2C
|
materialSampleID |
USP-24-01-171
|
target_gene |
COI
|
DNA_sequence |
TTTATCTACTTTCTCATATCATGGAATGTGCATGGACTTGGCTATTTTGAGACTTCACTTAGCTGGTATTAGATCAATCTTTAGGTCAATTAACTTTATGGTGACAATTACTAATATACGATCAGTAGATGGCCATTTATTGGCTTTGTTTCCTTGATCTATTAAAGTGACTTCATTTTTATTACTTACCACTCTTCCAGTATTGGCTGGTGGGTTGACTATGTTACTGACGGACCGACATTTTAATACTTCTTTTTTCGATCCGGTAGGAGGTGGTGATCCGGTCTTATTTCAGCATTTATTC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683510",
"identity": 0.974,
"query_cover": 0.9967
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683511",
"identity": 0.974,
"query_cover": 0.9967
}
]
}
|
organismQuantity |
5.0
|
id |
28012676-8176-4360-9243-0ea440190c32
|
scientificName |
Dendostrea sandvichensis
|
AphiaID |
506713
|
eventDate |
2023-11-28
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
eventID |
SUVA3_20231128_WC
|
materialSampleID |
USP-24-01-165
|
target_gene |
COI
|
DNA_sequence |
TTTGTCTACTTTCTCATATCACGGAATGTGCATGGATTTGGCCATTTTAAGACTTCATTTAGCCGGAATTAGATCAATTTTTAGGTCAATTAACTTTGTAGTAACAATTACTAATATACGGTCAGTAGATGGCCACTTGTTAGCTTTATTTCCTTGGTCTATTAAAGTGACTTCATTTTTATTACTTACCACTCTTCCAGTCTTAGCTGGTGGGTTAACTATGTTACTGACAGATCGACATTTTAACACTTCTTTCTTTGACCCAGTAGGGGGTGGTGATCCGGTTTTATTCCAGCATTTATTC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"confidence": 0.81
}
]
}
|
organismQuantity |
4.0
|
id |
bb777c61-8f52-4ace-988d-8c201e347c7b
|
scientificName |
Dendostrea sandvichensis
|
AphiaID |
506713
|
eventDate |
2023-11-28
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
eventID |
SUVA3_20231128_PC
|
materialSampleID |
USP-24-01-186
|
target_gene |
COI
|
DNA_sequence |
TTTATCTACTTTCTCATATCATGGAATGTGTATGGACTTGGCTATTTTGAGACTTCACTTAGCTGGTATTAGATCAATTTTTAGGTCAATTAACTTTATGGTGACAATTACTAATATACGATCAGTAGATGGCCATTTATTGGCTTTGTTTCCTTGATCTATTAAAGTGACTTCATTTTTATTACTTACCACTCTTCCAGTATTGGCTGGTGGGTTGACTATGTTACTGACGGACCGACATTTTAATACTTCTTTCTTCGATCCGGTAGGAGGTGGTGATCCGGTCTTATTTCAGCATTTATTC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683510",
"identity": 0.984,
"query_cover": 0.9967
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683511",
"identity": 0.984,
"query_cover": 0.9967
}
]
}
|
organismQuantity |
3.0
|
id |
be4d2b62-bd6d-4e8c-8197-e03c6131ea16
|
scientificName |
Dendostrea sandvichensis
|
AphiaID |
506713
|
eventDate |
2023-11-28
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
eventID |
SUVA3_20231128_S2B
|
materialSampleID |
USP-24-01-170
|
target_gene |
COI
|
DNA_sequence |
TTTATCTACTTTCTCATATCATGGAATGTGTATGGACTTGGCTATTTTGAGACTTCACTTAGCTGGTATTAGATCAATTTTTAGGTCAATTAACTTTATGGTGACAATTACTAATATACGATCAGTAGATGGCCATTTATTGGCTTTGTTTCCTTGATCTATTAAAGTGACTTCATTTTTATTACTTACCACTCTTCCAGTATTGGCTGGCGGGTTGACTATGTTACTGACGGATCGGCATTTTAATACTTCTTTCTTCGATCCAGTAGGAGGTGGTGATCCGGTCTTATTTCAGCATTTATTC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683510",
"identity": 0.99,
"query_cover": 0.9967
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683511",
"identity": 0.99,
"query_cover": 0.9967
}
]
}
|
organismQuantity |
2.0
|
id |
289f64ea-a1bc-4409-beab-cd8106f82b90
|
scientificName |
Dendostrea sandvichensis
|
AphiaID |
506713
|
eventDate |
2023-11-28
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
eventID |
SUVA3_20231128_PC
|
materialSampleID |
USP-24-01-186
|
target_gene |
COI
|
DNA_sequence |
TTTATCTACTTTCTCATATCATGGAATGTGCATGGACTTGGCTATTTTGAGACTTCACTTAGCTGGTATTAGATCAATTTTTAGGTCAATTAACTTTATGGTGACAATTACTAATATACGATCAGTAGATGGCCATTTATTGGCTTTGTTTCCTTGATCTATTAAAGTGACTTCATTTTTATTACTTACCACTCTTCCAGTATTGGCTGGTGGGTTGACTATGTTACTGACGGACCGACATTTTAATACTTCTTTCTTCGATCCGGTAGGAGGCGGTGATCCGGTCTTATTTCAGCATTTATTC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683510",
"identity": 0.977,
"query_cover": 0.9967
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683511",
"identity": 0.977,
"query_cover": 0.9967
}
]
}
|
organismQuantity |
1.0
|
id |
b6b35561-608e-4ff5-ac22-89937a0f6c3a
|
scientificName |
Dendostrea sandvichensis
|
AphiaID |
506713
|
eventDate |
2023-11-28
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
eventID |
SUVA3_20231128_WB
|
materialSampleID |
USP-24-01-164
|
target_gene |
COI
|
DNA_sequence |
TTTATCTACTTTCTCATATCATGGAATGTGTATGGACTTGGCTATTTTGAGACTTCACTTAGCTGGTATTAGATCAATTTTTAGGTCAATTAACTTTATGGTGACAATTACTAATATACGATCAGTAGATGGCCATTTATTGGCTTTGTTTCCTTGATCTATTAAAGTGACTTCATTTTTATTACTTACCACTCTTCCAGTATTGGCTGGTGGGTTGACTATGTTACTGACGGACCGACATTTTAATACTTCTTTCTTCGATCCGGTAGGAGGTGGTGATCCGGTCTTATTTCAGCATTTATTC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683510",
"identity": 0.984,
"query_cover": 0.9967
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683511",
"identity": 0.984,
"query_cover": 0.9967
}
]
}
|
organismQuantity |
1.0
|
|