Occurrences: |
view occurrences
id |
2ea59d36-0220-4f2a-82f8-5a94010c422a
|
scientificName |
Amphibalanus amphitrite
|
AphiaID |
421137
|
eventDate |
2022-02-01
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
S93
|
target_gene |
COI
|
DNA_sequence |
TTTATCAAGTAACATTGCTCATTCTGGTGCTTCAGTTGACTTATCAATTTTCTCTTTACATTTAGCGGGTGCTTCGTCAATTTTAGGTGCCATTAATTTTATGTCTACAGTTATTAACATACGAGCTGAAACACTGACATTTGATCGACTTCCATTATTTGTCTGAAGAGTATTTATTACTGTAATTCTTTTACTTTTATCACTTCCAGTACTAGCAGGAGCTATTACTATGTTGCTAACAGATCGAAATCTGAATACCTCATTTTTTGATCCAACAGGAGGTGGAGATCCAATCTTATACCAACATCTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "JQ035516",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211366",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211368",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211371",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211373",
"identity": 1,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
441.0
|
id |
63d42be4-39a2-40c8-81cf-88093c75c692
|
scientificName |
Amphibalanus amphitrite
|
AphiaID |
421137
|
eventDate |
2022-02-01
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
S93
|
target_gene |
COI
|
DNA_sequence |
TTTATCAAGTAACATTGCTCATTCTGGTGCTTCAGTTGACTTATCAATTTTCTCTTTACATTTAGCGGGTGCTTCGTCAATTTTAGGTGCCATTAATTTTATGTCTACAGTTATTAACATACGAGCTGAAACACTGACATTTGATCGACTTCCATTATTTGTCTGAAGAGTATTTATTACTGTAATTCTTTTACTTTTATCACTTCCAGTACTAGCAGGAGCTATTACTATGTTGCTAACAGATCGAAATCTAAATACCTCATTTTTTGATCCAACAGGAGGTGGAGATCCAATCTTATACCAACATCTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KC138445",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211364",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211365",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211375",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211378",
"identity": 1,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
78.0
|
id |
bf99e9af-e906-429a-a10a-b532a6e4b754
|
scientificName |
Amphibalanus amphitrite
|
AphiaID |
421137
|
eventDate |
2022-02-01
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
S93
|
target_gene |
COI
|
DNA_sequence |
TTTATCAAGTAACATTGCTCATTCTGGTGCTTCAGTTGACTTATCAATTTTCTCTTTACATTTAGCGGGTGCTTCGTCAATTTTAGGTGCCATTAATTTTATGTCTACAGTTATTAACATACGAGCTGAAACACTGACATTTGATCGACTTCCATTATTTGTCTGAAGAGTATTTATTACTGTAATTCTTTTACTTTTATCACTTCCAGTACTAGCAGGAGCTATTACTATGTTGCTAACAGATCGAAATCTGAATACCTCATTTTTTGATCCAACAGGAGGTGGAGACCCAATCTTATACCAACATCTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211366",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211368",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211371",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211373",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211387",
"identity": 1,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
2.0
|
id |
86750316-7fcb-4ed5-b732-f9f3c0632830
|
scientificName |
Amphibalanus amphitrite
|
AphiaID |
421137
|
eventDate |
2022-02-01
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
materialSampleID |
S100
|
target_gene |
COI
|
DNA_sequence |
TTTATCAAGTAACATTGCTCATTCTGGTGCTTCAGTTGACTTATCAATTTTCTCTTTACATTTAGCGGGTGCTTCGTCAATTTTAGGTGCCATTAATTTTATGTCTACAGTTATTAACATACGAGCTGAAACACTGACATTTGATCGACTTCCATTATTTGTCTGAAGAGTATTTATTACTGTAATTCTTTTACTTTTATCACTTCCAGTACTAGCAGGAGCTATTACTATGTTGCTAACAGATCGAAATCTAAATACCTCATTTTTTGATCCAACAGGAGGTGGAGATCCAATCTTATACCAACATCTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KC138445",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211364",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211365",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211375",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211378",
"identity": 1,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
1.0
|
id |
f4dea6e2-dd98-4946-b06b-e98848ad3db1
|
scientificName |
Amphibalanus amphitrite
|
AphiaID |
421137
|
eventDate |
2022-02-01
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
S93
|
target_gene |
COI
|
DNA_sequence |
TTTATCAAGTAACATTGCTCATTCTGGTGCTTCAGTTGACTTATCAATTTTCTCTTTACATTTAGCGGGTGCTTCGTCAATTTTAGGTGCCATTAATTTTATGTCTACAGTTATTAACATACGAGCTGAAACACTGACATTTGATTGACTTCCATTATTTGTCTGAAGAGTATTTATTACTGTAATTCTTTTACTTTTATCACTTCCAGTACTAGCAGGAGCTATTACTATGTTGCTAACAGATCGAAATCTGAATACCTCATTTTTTGATCCAACAGGAGGTGGAGATCCAATCTTATACCAACATCTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "JQ035516",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "OQ119806",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "OQ119825",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "OQ119840",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "OQ119873",
"identity": 0.997,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
12.0
|
id |
02f7a359-62af-459b-abd6-e39cb944652a
|
scientificName |
Amphibalanus amphitrite
|
AphiaID |
421137
|
eventDate |
2022-02-01
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
S93
|
target_gene |
COI
|
DNA_sequence |
TTTATCAAGTAACATTGCTCATTCTGGTGCTTCAGTTGACTTATCAATTTTCTCTTTACATTTAGCGGGTGCTTCGTCAATTTTAGGTGCCATTAATTTTATGTCTACAGTTATTAACATACGAGCTGAAACACTGACATTTGATCGACTTCCATTATTTGTCTGAAGAGTATTTATTACTGTAATTCTTTTACTTTTATCACTTCCAGTACTAGCAGGAGCTATTACTATGTTGCTGACAGATCGAAATCTAAATACCTCATTTTTTGATCCAACAGGAGGTGGAGATCCAATCTTATACCAACATCTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KC138445",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM974415",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "OQ119800",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "OQ119801",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "OQ119804",
"identity": 0.997,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
2.0
|
id |
90681048-e7c8-4c1d-bbcc-18db91ca02bf
|
scientificName |
Amphibalanus amphitrite
|
AphiaID |
421137
|
eventDate |
2022-02-01
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
S93
|
target_gene |
COI
|
DNA_sequence |
TTTATCAAGTAACATTGCTCATTCTGGTGCTTCAGTTGACTTATCAATTTTCTCTTTACATTTAGCGGGTGCTTCGTCAATTTTAGGTGCCATTAATTTTATGTCTACAGTTATTAACATACGAGCTGAAACACTGACATTTGATTGACTTCCATTATTTGTCTGAAGAGTATTTATTACTGTAATTCTTTTACTTTTATCACTTCCAGTACTAGCAGGAGCTATTACTATGTTGCTAACAGATCGAAATCTAAATACCTCATTTTTTGATCCAACAGGAGGTGGAGATCCAATCTTATACCAACATCTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KC138445",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM974415",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "OQ119800",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "OQ119801",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "OQ119804",
"identity": 0.997,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
2.0
|
id |
e4ae541f-4bae-41b3-b9ce-1ef389f434c2
|
scientificName |
Amphibalanus amphitrite
|
AphiaID |
421137
|
eventDate |
2022-02-01
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
materialSampleID |
S91
|
target_gene |
COI
|
DNA_sequence |
TTTATCAAGTAACATTGCTCATTCTGGTGCTTCAGTTGACTTATCAATTTTCTCTTTACATTTAGCGGGTGCTTCGTCAATTTTAGGTGCCATTAATTTTATGTCTACAGTTATTAACATACGAGCTGAAACACTGACATTTGATCGACTTCCATTATTTGTCTGAAGAGTATTTATTACTGTAATTCTTTTACTTTTATCACTTCCAGTACTAGCAGGAGCTATTACTATGTTGCTGACAGATCGAAATCTAAATACCTCATTTTTTGATCCAACAGGAGGTGGAGATCCAATCTTATACCAACATCTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KC138445",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM974415",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "OQ119800",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "OQ119801",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "OQ119804",
"identity": 0.997,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
1.0
|
id |
1b78ed50-9b3a-47fc-ba2a-3d91525b05f8
|
scientificName |
Amphibalanus amphitrite
|
AphiaID |
421137
|
eventDate |
2022-02-01
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
S93
|
target_gene |
COI
|
DNA_sequence |
TGAAGAGTATTTATTACTGTAATTCTTTTACTTTTATCACTTCCAGTACTAGCAGGAGCTATTACTATGTTGCTAACAGATCGAAATCTGAATACCTCATTTTTTGATCCAACAGGAGGTGGAGACCCAATCTTATACCAACATCTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "JQ035515",
"identity": 0.993,
"query_cover": 0.9933
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "JQ035516",
"identity": 0.993,
"query_cover": 0.9933
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "OQ119806",
"identity": 0.993,
"query_cover": 0.9933
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "OQ119825",
"identity": 0.993,
"query_cover": 0.9933
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "OQ119840",
"identity": 0.993,
"query_cover": 0.9933
}
]
}
|
organismQuantity |
1.0
|
id |
b44838bb-f1b8-4017-9c44-42561b8ba69f
|
scientificName |
Amphibalanus amphitrite
|
AphiaID |
421137
|
eventDate |
2022-02-01
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
S93
|
target_gene |
COI
|
DNA_sequence |
TTTGTCAAGTAATATTGCTCATTCTGGTGCTTCAGTTGACTTATCAATTTTTTCCTTACATTTAGCAGGTGCTTCGTCAATTTTAGGTGCCATTAATTTTATGTCTACAGTTATTAACATACGAGCTGAAACACTAACATTTGATCGACTTCCTTTATTTGTCTGAAGAGTATTTATTACCGTAATTCTTTTACTTTTATCGCTTCCAGTACTAGCAGGAGCTATTACTATGTTGCTAACAGATCGAAATCTGAATACCTCATTTTTTGATCCAACAGGAGGTGGAGATCCAATTTTATACCAACACCTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211386",
"identity": 0.972,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211438",
"identity": 0.972,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211471",
"identity": 0.972,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211489",
"identity": 0.972,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
141.0
|
|