PacMAN decision support system

Potential detection of Hydroides minax in Fiji

Description:

Potential detection of Hydroides minax with confidence low on 2023-04-27 in material sample USP-24-01-02, marker 18S

Confidence:

low

Risk:

medium view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Hydroides minax
Annelida > Polychaeta > Sabellida > Serpulidae
WoRMS: 131007

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

1.0

Reads:

183.0

Names:

4

Occurrences:

view occurrences

id	ec224a4e-e119-47b7-83bb-d36aecea0cce
scientificName	Serpula vermicularis
AphiaID	131051
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-02
target_gene	18S
DNA_sequence	CCGTTGGTCTCTGTGACTGGTGTAATGATTAAGAGGGACTGCCGGGGGCATTGGTATGGCGGGGTTAGAGGTGAAATTCTTGGATCCTCGCCAGACCAACAAAAGCGAAAGCATTTGCCAAGAATGTCTTCATTAATCAAGAACGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Serpula vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Serpula_columbiana", "scientificNameID": "urn:lsid:marinespecies.org:taxname:338088", "accession": "DQ317127.1.1715_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydroides_minax", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131007", "accession": "EU184063.1.1735_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Serpula_vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "accession": "AY395721.1.1715_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydroides_tuberculatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:328479", "accession": "EU184059.1.1740_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Serpula_vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "accession": "DQ140409.1.1708_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	183.0

id	0349fb9c-830f-4434-8e5f-8e8703fd2502
scientificName	Serpula vermicularis
AphiaID	131051
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-08
target_gene	18S
DNA_sequence	CCGTTGGTCTCTGTGACTGGTGTAATGATTAAGAGGGACTGCCGGGGGCATTGGTATGGCGGGGTTAGAGGTGAAATTCTTGGATCCTCGCCAGACCAACAAAAGCGAAAGCATTTGCCAAGAATGTCTTCATTAATCAAGAACGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Serpula vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Serpula_columbiana", "scientificNameID": "urn:lsid:marinespecies.org:taxname:338088", "accession": "DQ317127.1.1715_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydroides_minax", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131007", "accession": "EU184063.1.1735_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Serpula_vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "accession": "AY395721.1.1715_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydroides_tuberculatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:328479", "accession": "EU184059.1.1740_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Serpula_vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "accession": "DQ140409.1.1708_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	92.0

id	f6583f2c-372d-4fe3-870b-09cf0ff41c97
scientificName	Serpula vermicularis
AphiaID	131051
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-09
target_gene	18S
DNA_sequence	CCGTTGGTCTCTGTGACTGGTGTAATGATTAAGAGGGACTGCCGGGGGCATTGGTATGGCGGGGTTAGAGGTGAAATTCTTGGATCCTCGCCAGACCAACAAAAGCGAAAGCATTTGCCAAGAATGTCTTCATTAATCAAGAACGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Serpula vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Serpula_columbiana", "scientificNameID": "urn:lsid:marinespecies.org:taxname:338088", "accession": "DQ317127.1.1715_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydroides_minax", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131007", "accession": "EU184063.1.1735_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Serpula_vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "accession": "AY395721.1.1715_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydroides_tuberculatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:328479", "accession": "EU184059.1.1740_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Serpula_vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "accession": "DQ140409.1.1708_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	85.0

id	719e4f9f-8f75-4329-abad-ce783cc5809f
scientificName	Serpula vermicularis
AphiaID	131051
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-03
target_gene	18S
DNA_sequence	CCGTTGGTCTCTGTGACTGGTGTAATGATTAAGAGGGACTGCCGGGGGCATTGGTATGGCGGGGTTAGAGGTGAAATTCTTGGATCCTCGCCAGACCAACAAAAGCGAAAGCATTTGCCAAGAATGTCTTCATTAATCAAGAACGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Serpula vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Serpula_columbiana", "scientificNameID": "urn:lsid:marinespecies.org:taxname:338088", "accession": "DQ317127.1.1715_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydroides_minax", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131007", "accession": "EU184063.1.1735_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Serpula_vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "accession": "AY395721.1.1715_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydroides_tuberculatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:328479", "accession": "EU184059.1.1740_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Serpula_vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "accession": "DQ140409.1.1708_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	45.0

id	93cbfdbe-7166-4ef5-9c2b-3572af6a279a
scientificName	Serpula vermicularis
AphiaID	131051
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-07
target_gene	18S
DNA_sequence	CCGTTGGTCTCTGTGACTGGTGTAATGATTAAGAGGGACTGCCGGGGGCATTGGTATGGCGGGGTTAGAGGTGAAATTCTTGGATCCTCGCCAGACCAACAAAAGCGAAAGCATTTGCCAAGAATGTCTTCATTAATCAAGAACGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Serpula vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Serpula_columbiana", "scientificNameID": "urn:lsid:marinespecies.org:taxname:338088", "accession": "DQ317127.1.1715_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydroides_minax", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131007", "accession": "EU184063.1.1735_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Serpula_vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "accession": "AY395721.1.1715_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydroides_tuberculatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:328479", "accession": "EU184059.1.1740_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Serpula_vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "accession": "DQ140409.1.1708_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	20.0

id	696b3de6-77f8-436f-8e48-2dbd8e56e607
scientificName	Serpula vermicularis
AphiaID	131051
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-13
target_gene	18S
DNA_sequence	CCGTTGGTCTCTGTGACTGGTGTAATGATTAAGAGGGACTGCCGGGGGCATTGGTATGGCGGGGTTAGAGGTGAAATTCTTGGATCCTCGCCAGACCAACAAAAGCGAAAGCATTTGCCAAGAATGTCTTCATTAATCAAGAACGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Serpula vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Serpula_columbiana", "scientificNameID": "urn:lsid:marinespecies.org:taxname:338088", "accession": "DQ317127.1.1715_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydroides_minax", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131007", "accession": "EU184063.1.1735_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Serpula_vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "accession": "AY395721.1.1715_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydroides_tuberculatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:328479", "accession": "EU184059.1.1740_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Serpula_vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "accession": "DQ140409.1.1708_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	1.0

id	ea4800d6-18ca-466c-b904-c228a2bd3999
scientificName	Hydroides
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-08
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGTATCGTCTCGGTGGTCCTGTTCACGCAGGCACTGCCTTGATGACCTAACCGATGGTTGAACGACTCCGAGTGCCCTTCACTGGGTGCTCGTGGGTGGCCATCGCGTTTACTGTGAAAAAATTAGAGTGTTCAAAGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Hydroides", "scientificNameID": "urn:lsid:marinespecies.org:taxname:129566", "confidence": 0.83 }, { "method": "VSEARCH", "scientificName": "Hydroides_ezoensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131003", "accession": "EU184062.1.1745_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_minax", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131007", "accession": "EU184063.1.1735_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_tuberculatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:328479", "accession": "EU184059.1.1740_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_trivesiculosus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:328477", "accession": "EU184060.1.1723_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_sanctaecrucis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:333645", "accession": "EU184061.1.1774_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	90.0

id	50c218c3-37d4-403a-bc69-4edbed07deee
scientificName	Hydroides
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-09
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGTATCGTCTCGGTGGTCCTGTTCACGCAGGCACTGCCTTGATGACCTAACCGATGGTTGAACGACTCCGAGTGCCCTTCACTGGGTGCTCGTGGGTGGCCATCGCGTTTACTGTGAAAAAATTAGAGTGTTCAAAGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Hydroides", "scientificNameID": "urn:lsid:marinespecies.org:taxname:129566", "confidence": 0.83 }, { "method": "VSEARCH", "scientificName": "Hydroides_ezoensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131003", "accession": "EU184062.1.1745_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_minax", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131007", "accession": "EU184063.1.1735_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_tuberculatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:328479", "accession": "EU184059.1.1740_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_trivesiculosus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:328477", "accession": "EU184060.1.1723_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_sanctaecrucis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:333645", "accession": "EU184061.1.1774_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	87.0

id	d1d04bf2-83c1-4c31-957c-73f7eb531c0f
scientificName	Hydroides
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-07
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGTATCGTCTCGGTGGTCCTGTTCACGCAGGCACTGCCTTGATGACCTAACCGATGGTTGAACGACTCCGAGTGCCCTTCACTGGGTGCTCGTGGGTGGCCATCGCGTTTACTGTGAAAAAATTAGAGTGTTCAAAGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Hydroides", "scientificNameID": "urn:lsid:marinespecies.org:taxname:129566", "confidence": 0.83 }, { "method": "VSEARCH", "scientificName": "Hydroides_ezoensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131003", "accession": "EU184062.1.1745_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_minax", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131007", "accession": "EU184063.1.1735_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_tuberculatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:328479", "accession": "EU184059.1.1740_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_trivesiculosus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:328477", "accession": "EU184060.1.1723_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_sanctaecrucis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:333645", "accession": "EU184061.1.1774_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	19.0

id	9171c24e-c6e7-4a1d-b4af-109a7de14add
scientificName	Hydroides
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-03
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGTATCGTCTCGGTGGTCCTGTTCACGCAGGCACTGCCTTGATGACCTAACCGATGGTTGAACGACTCCGAGTGCCCTTCACTGGGTGCTCGTGGGTGGCCATCGCGTTTACTGTGAAAAAATTAGAGTGTTCAAAGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Hydroides", "scientificNameID": "urn:lsid:marinespecies.org:taxname:129566", "confidence": 0.83 }, { "method": "VSEARCH", "scientificName": "Hydroides_ezoensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131003", "accession": "EU184062.1.1745_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_minax", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131007", "accession": "EU184063.1.1735_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_tuberculatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:328479", "accession": "EU184059.1.1740_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_trivesiculosus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:328477", "accession": "EU184060.1.1723_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_sanctaecrucis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:333645", "accession": "EU184061.1.1774_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	11.0

Hydroides minax in Fiji

Status

Hydroides minax does not have an offial status in Fiji.

Notes

No notes found.