PacMAN decision support system

Potential detection of Ascidia gemmata in Fiji

Description:

Potential detection of Ascidia gemmata with confidence low on 2022-06-20 in material sample S130, marker COI

Confidence:

low

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Ascidia gemmata
Chordata > Ascidiacea > Phlebobranchia > Ascidiidae
WoRMS: 249992

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

Reads:

13.0

Names:

Occurrences:

view occurrences

id	fce7f2e3-f334-4628-b5d9-1945142feb09
scientificName	Ascidia gemmata
AphiaID	249992
eventDate	2022-06-20
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S130
target_gene	COI
DNA_sequence	TCTCTCGAGCAATATTGCTCACTCTGGGCCTGCTGTGGATTTGGCTATTTTTTCATTGCACTTGGCTAGGGTTTCCAGTATCTTAGGCTCTATTAATTTTTTAGTGACTATAATAGGAATAAAATTAAGTGGGTTTAGTTTTCTAAATTTAAGCTTGTTTTGCTGGTCGGTTGTTTTTACAACTATTCTATTAGTATTGTCTTTACCTGTGCTAGCTGCTGCCATTACTATGTTGTTATTTGATCGAAACTTTAATACGAGTTTCTTTGATCCTGGAAGAGGAGGAGATCCTGTTCTTTATCAGCATTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ascidia gemmata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:249992", "confidence": 1 } ] }
organismQuantity	13.0

id	c9181d60-25ed-4020-83f2-2504f868dcb7
scientificName	Ascidia gemmata
AphiaID	249992
eventDate	2022-06-20
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S151
target_gene	COI
DNA_sequence	TCTCTCGAGCAATATTGCTCACTCTGGGCCTGCTGTGGATTTGGCTATTTTTTCATTGCACTTGGCTAGGGTTTCCAGTATCTTAGGCTCTATTAATTTTTTAGTGACTATAATAGGAATAAAATTAAGTGGGTTTAGTTTTCTAAATTTAAGCTTGTTTTGCTGGTCGGTTGTTTTTACAACTATTCTATTAGTATTGTCTTTACCTGTGCTAGCTGCTGCCATTACTATGTTGTTATTTGATCGAAACTTTAATACGAGTTTCTTTGATCCTGGAAGAGGAGGAGATCCTGTTCTTTATCAGCATTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ascidia gemmata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:249992", "confidence": 1 } ] }
organismQuantity	7.0

id	042f1a54-cf5d-4dc8-8001-da1f2983db4e
scientificName	Ascidia gemmata
AphiaID	249992
eventDate	2022-06-20
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S157
target_gene	COI
DNA_sequence	TCTCTCGAGCAATATTGCTCACTCTGGGCCTGCTGTGGATTTGGCTATTTTTTCATTGCACTTGGCTAGGGTTTCCAGTATCTTAGGCTCTATTAATTTTTTAGTGACTATAATAGGAATAAAATTAAGTGGGTTTAGTTTTCTAAATTTAAGCTTGTTTTGCTGGTCGGTTGTTTTTACAACTATTCTATTAGTATTGTCTTTACCTGTGCTAGCTGCTGCCATTACTATGTTGTTATTTGATCGAAACTTTAATACGAGTTTCTTTGATCCTGGAAGAGGAGGAGATCCTGTTCTTTATCAGCATTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ascidia gemmata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:249992", "confidence": 1 } ] }
organismQuantity	3.0

id	9715670b-d1c4-4e1c-8b72-eef573a7a790
scientificName	Ascidia gemmata
AphiaID	249992
eventDate	2022-06-20
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S157
target_gene	COI
DNA_sequence	TCTCTCGAGCAATATTGCTCACTCTGGGCCTGCTGTGGATTTGGCTATTTTTTCATTGCACTTGGCTAGGGTTTCCAGTATCTTAGGCTCTATTAATTTTTTAGTGACTATAATAGGAATAAAATTAAGTGGATTTAGTTTTCTAAATTTAAGCTTGTTTTGCTGGTCGGTTGTTTTTACAACTATTCTATTAGTATTGTCTTTACCCGTGCTAGCTGCTGCCATTACTATGTTGTTATTTGATCGAAACTTTAATACGAGTTTCTTTGATCCTGGAAGAGGAGGAGATCCTGTTCTTTATCAGCATTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ascidia gemmata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:249992", "confidence": 1 } ] }
organismQuantity	2.0

id	592c6d30-0f48-450f-aab2-f85fcd6c8f27
scientificName	Ascidia gemmata
AphiaID	249992
eventDate	2022-06-20
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S125
target_gene	COI
DNA_sequence	TCTCTCGAGCAATATTGCTCACTCTGGGCCTGCTGTGGATTTGGCTATTTTTTCATTGCACTTGGCTAGGGTTTCCAGTATCTTAGGCTCTATTAATTTTTTAGTGACTATAATAGGAATAAAATTAAGTGGGTTTAGTTTTCTAAATTTAAGCTTGTTTTGCTGGTCGGTTGTTTTTACAACTATTCTATTAGTATTGTCTTTACCTGTGCTAGCTGCTGCCATTACTATGTTGTTATTTGATCGAAACTTTAATACGAGTTTCTTTGATCCTGGAAGAGGAGGAGATCCTGTTCTTTATCAGCATTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ascidia gemmata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:249992", "confidence": 1 } ] }
organismQuantity	1.0

id	f3a2fd3f-9638-4abf-9edd-fe9acf95adcb
scientificName	Ascidia gemmata
AphiaID	249992
eventDate	2022-06-20
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S131
target_gene	COI
DNA_sequence	TCTCTCGAGCAATATTGCTCACTCTGGGCCTGCTGTGGATTTGGCTATTTTTTCATTGCACTTGGCTAGGGTTTCCAGTATCTTAGGCTCTATTAATTTTTTAGTGACTATAATAGGAATAAAATTAAGTGGGTTTAGTTTTCTAAATTTAAGCTTGTTTTGCTGGTCGGTTGTTTTTACAACTATTCTATTAGTATTGTCTTTACCTGTGCTAGCTGCTGCCATTACTATGTTGTTATTTGATCGAAACTTTAATACGAGTTTCTTTGATCCTGGAAGAGGAGGAGATCCTGTTCTTTATCAGCATTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ascidia gemmata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:249992", "confidence": 1 } ] }
organismQuantity	1.0

id	f862d428-d8d2-4017-aa23-8c2b0c87538f
scientificName	Ascidia gemmata
AphiaID	249992
eventDate	2022-06-20
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S151
target_gene	COI
DNA_sequence	TCTCTCGAGCAATATTGCTCACTCTGGGCCTGCTGTGGATTTGGCTATTTTTTCATTGCACTTGGCTAGGGTTTCCAGTATCTTAGGCTCTATTAATTTTTTAGTGACTATAATAGGAATAAAATTAAGTGGGTTTAGTTTTCTAAATTTAAGCTTGTTTTGCTGGTCGGTTGTTTTTACAACTATTCTATTAGTATTGTCTTTACCCGTGCTAGCTGCTGCCATTACTATGTTGTTATTTGATCGAAACTTTAATACGAGTTTCTTTGATCCTGGAAGAGGAGGAGATCCTGTTCTTTATCAGCATTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ascidia gemmata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:249992", "confidence": 1 } ] }
organismQuantity	1.0

Ascidia gemmata does not have an offial status in Fiji.

No notes found.