PacMAN decision support system

Potential detection of Callopora lineata in Fiji

Description:

Potential detection of Callopora lineata with confidence low on 2022-10-03 in material sample S80, marker 18S

Confidence:

low

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Callopora lineata
Bryozoa > Gymnolaemata > Cheilostomatida > Calloporidae
WoRMS: 111197

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

1.0

Reads:

85.0

Names:

5

Occurrences:

view occurrences

id	f2d6c845-9601-4efb-9c42-80512a454c0c
scientificName	Callopora lineata
AphiaID	111197
eventDate	2022-10-03
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S80
target_gene	18S
DNA_sequence	GTTGGTTAGAGAGTCGGCGAGCCAATGATTAACAGGGACTGCCGGGGGCATTAGTACTCGGACGGGAGAGGTGAAATTCAAGGATCGTCCGAAGACTCCCTACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAACGAAAGTCAGAGGTGCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Callopora lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "confidence": 0.95 }, { "method": "VSEARCH", "scientificName": "Bugula_turrita", "scientificNameID": "urn:lsid:marinespecies.org:taxname:159783", "accession": "AY210443.1.1841_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Callopora_dumerilii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111196", "accession": "FJ152025.1.2143_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Bugula_plumosa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111159", "accession": "JN680951.1.1836_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Callopora_lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "accession": "JN680949.1.1836_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Bugula_fulva", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111153", "accession": "FJ152023.1.2123_U", "identity": 0.994, "query_cover": 0.9938 } ] }
organismQuantity	85.0

id	3e7fa556-6f9d-4d46-861a-026dae350d11
scientificName	Callopora lineata
AphiaID	111197
eventDate	2022-10-03
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S74
target_gene	18S
DNA_sequence	GTTGGTTAGAGAGTCGGCGAGCCAATGATTAACAGGGACTGCCGGGGGCATTAGTACTCGGACGGGAGAGGTGAAATTCAAGGATCGTCCGAAGACTCCCTACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAACGAAAGTCAGAGGTGCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Callopora lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "confidence": 0.95 }, { "method": "VSEARCH", "scientificName": "Bugula_turrita", "scientificNameID": "urn:lsid:marinespecies.org:taxname:159783", "accession": "AY210443.1.1841_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Callopora_dumerilii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111196", "accession": "FJ152025.1.2143_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Bugula_plumosa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111159", "accession": "JN680951.1.1836_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Callopora_lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "accession": "JN680949.1.1836_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Bugula_fulva", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111153", "accession": "FJ152023.1.2123_U", "identity": 0.994, "query_cover": 0.9938 } ] }
organismQuantity	1.0

id	052542a4-42a4-4bb4-9a93-aad1de7cb3a9
scientificName	Callopora lineata
AphiaID	111197
eventDate	2022-10-03
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S87
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAGCAGCGTATATTTATATTGCTGCGTTTAAAAAGCTCGTAGTTGAAGCGTCAGACGCGGGAGGGCGGACGGCCGCACTGGTCGCTCACGCCCGACCGAGCCAGGCGCAGAGGGCGCGCGTCGCTTGCACTTCACCGTGTGAGCGCGCCGCCGCTGCACGTTCACCTTGAAGAAATTGAACCGCTTAGAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Callopora lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "confidence": 0.9 }, { "method": "VSEARCH", "scientificName": "Callopora_dumerilii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111196", "accession": "FJ152025.1.2143_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Callopora_lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "accession": "JN680949.1.1836_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Callopora_lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "accession": "FJ152026.1.1903_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bryozoa_XXX_sp.", "accession": "FJ153752.1.1820_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bryozoa_XXX_sp.", "accession": "FJ486006.1.831_U", "identity": 0.995, "query_cover": 0.9952 } ] }
organismQuantity	69.0

id	cea75dda-9b0c-4741-b3c3-51a6f6c10d36
scientificName	Callopora lineata
AphiaID	111197
eventDate	2022-10-03
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S80
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAGCAGCGTATATTTATATTGCTGCGTTTAAAAAGCTCGTAGTTGAAGCGTCAGACGCGGGAGGGCGGACGGCCGCACTGGTCGCTCTCGCCCGACCGAGCCAGGCGCAGAGGGCGCGCGTCGCTTGCACTTTGCCGTGTGAGCGCGCCGCCGCTGCACGTTCACCTTGAAGAAATTGAACCGCTTAGAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Callopora lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "confidence": 0.81 }, { "method": "VSEARCH", "scientificName": "Cryptosula_pallasiana", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111343", "accession": "FJ196129.1.1578_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Cryptosula_pallasiana", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111343", "accession": "JN680940.1.1832_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bugula_turrita", "scientificNameID": "urn:lsid:marinespecies.org:taxname:159783", "accession": "AY210443.1.1841_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bugula_fulva", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111153", "accession": "FJ152023.1.2123_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Callopora_dumerilii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111196", "accession": "FJ152025.1.2143_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	74.0

id	e15fcc1c-18ce-4832-a017-20942e812a80
scientificName	Callopora lineata
AphiaID	111197
eventDate	2022-10-03
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S87
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAGCAGCGTATATTTATATTGCTGCGTTTAAAAAGCTCGTAGTTGAAGCGTCAGACGCGGGAGGGCGGACGGCCGCACTGGTCGCTCTCGCCCGACCGAGCCAGGCGCAGAGGGCGCGCGTCGCTTGCACTTTGCCGTGTGAGCGCGCCGCCGCTGCACGTTCACCTTGAAGAAATTGAACCGCTTAGAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Callopora lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "confidence": 0.81 }, { "method": "VSEARCH", "scientificName": "Cryptosula_pallasiana", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111343", "accession": "FJ196129.1.1578_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Cryptosula_pallasiana", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111343", "accession": "JN680940.1.1832_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bugula_turrita", "scientificNameID": "urn:lsid:marinespecies.org:taxname:159783", "accession": "AY210443.1.1841_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bugula_fulva", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111153", "accession": "FJ152023.1.2123_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Callopora_dumerilii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111196", "accession": "FJ152025.1.2143_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	21.0

id	ab0f2e76-6b5d-4290-b1af-2e31b297b624
scientificName	Callopora lineata
AphiaID	111197
eventDate	2022-10-03
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S75
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAGCAGCGTATATTTATATTGCTGCGTTTAAAAAGCTCGTAGTTGAAGCGTCAGACGCGGGAGGGCGGACGGCCGCACTGGTCGCTCTCGCCCGACCGAGCCAGGCGCAGAGGGCGCGCGTCGCTTGCACTTTGCCGTGTGAGCGCGCCGCCGCTGCACGTTCACCTTGAAGAAATTGAACCGCTTAGAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Callopora lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "confidence": 0.81 }, { "method": "VSEARCH", "scientificName": "Cryptosula_pallasiana", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111343", "accession": "FJ196129.1.1578_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Cryptosula_pallasiana", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111343", "accession": "JN680940.1.1832_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bugula_turrita", "scientificNameID": "urn:lsid:marinespecies.org:taxname:159783", "accession": "AY210443.1.1841_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bugula_fulva", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111153", "accession": "FJ152023.1.2123_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Callopora_dumerilii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111196", "accession": "FJ152025.1.2143_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	3.0

id	8c55bece-b6f7-4186-ae95-f80257443751
scientificName	Callopora lineata
AphiaID	111197
eventDate	2022-10-03
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S74
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAGCAGCGTATATTTATATTGCTGCGTTTAAAAAGCTCGTAGTTGAAGCGTCAGACGCGGGAGGGCGGACGGCCGCACTGGTCGCTCTCGCCCGACCGAGCCAGGCGCAGAGGGCGCGCGTCGCTTGCACTTTGCCGTGTGAGCGCGCCGCCGCTGCACGTTCACCTTGAAGAAATTGAACCGCTTAGAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Callopora lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "confidence": 0.81 }, { "method": "VSEARCH", "scientificName": "Cryptosula_pallasiana", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111343", "accession": "FJ196129.1.1578_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Cryptosula_pallasiana", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111343", "accession": "JN680940.1.1832_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bugula_turrita", "scientificNameID": "urn:lsid:marinespecies.org:taxname:159783", "accession": "AY210443.1.1841_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bugula_fulva", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111153", "accession": "FJ152023.1.2123_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Callopora_dumerilii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111196", "accession": "FJ152025.1.2143_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	1.0

Callopora lineata in Fiji

Status

Callopora lineata does not have an offial status in Fiji.

Notes

No notes found.