PacMAN decision support system

Potential detection of Symplegma viride in Fiji

Description:

Potential detection of Symplegma viride with confidence low on 2023-08-24 in material sample USP-24-01-65, marker 18S

Confidence:

low

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Symplegma viride
Chordata > Ascidiacea > Stolidobranchia > Styelidae
WoRMS: 212501

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

1.0

Reads:

5971.0

Names:

4

Occurrences:

view occurrences

id	0de6b5d2-6e83-47fa-b144-1de4fa2a35af
scientificName	Symplegma
eventDate	2023-08-24
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-65
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Symplegma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:206885", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Symplegma_reptans", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251438", "accession": "AF165826.1.1066_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Symplegma_viride", "scientificNameID": "urn:lsid:marinespecies.org:taxname:212501", "accession": "DQ346655.1.1765_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_planus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215992", "accession": "DQ346653.1.1798_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botrylloides_violacea", "accession": "AY903927.1.1803_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_schlosseri", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103862", "accession": "AB211066.1.1750_U", "identity": 0.971, "query_cover": 0.9952 } ] }
organismQuantity	5971.0

id	74941a22-a9e4-423f-90b3-a5027dc6634c
scientificName	Symplegma
eventDate	2023-08-24
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-64
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Symplegma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:206885", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Symplegma_reptans", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251438", "accession": "AF165826.1.1066_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Symplegma_viride", "scientificNameID": "urn:lsid:marinespecies.org:taxname:212501", "accession": "DQ346655.1.1765_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_planus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215992", "accession": "DQ346653.1.1798_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botrylloides_violacea", "accession": "AY903927.1.1803_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_schlosseri", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103862", "accession": "AB211066.1.1750_U", "identity": 0.971, "query_cover": 0.9952 } ] }
organismQuantity	311.0

id	a7259f2b-5935-4601-88fe-de9ca4dd1884
scientificName	Symplegma
eventDate	2023-08-24
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-29
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Symplegma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:206885", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Symplegma_reptans", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251438", "accession": "AF165826.1.1066_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Symplegma_viride", "scientificNameID": "urn:lsid:marinespecies.org:taxname:212501", "accession": "DQ346655.1.1765_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_planus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215992", "accession": "DQ346653.1.1798_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botrylloides_violacea", "accession": "AY903927.1.1803_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_schlosseri", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103862", "accession": "AB211066.1.1750_U", "identity": 0.971, "query_cover": 0.9952 } ] }
organismQuantity	30.0

id	23a7f005-9ed8-4f40-a4ed-ba91dcff5700
scientificName	Symplegma
eventDate	2023-08-24
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-30
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Symplegma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:206885", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Symplegma_reptans", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251438", "accession": "AF165826.1.1066_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Symplegma_viride", "scientificNameID": "urn:lsid:marinespecies.org:taxname:212501", "accession": "DQ346655.1.1765_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_planus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215992", "accession": "DQ346653.1.1798_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botrylloides_violacea", "accession": "AY903927.1.1803_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_schlosseri", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103862", "accession": "AB211066.1.1750_U", "identity": 0.971, "query_cover": 0.9952 } ] }
organismQuantity	28.0

id	9300a300-11a9-4292-aaa1-84509e8bf9f3
scientificName	Symplegma
eventDate	2023-08-24
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-43
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Symplegma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:206885", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Symplegma_reptans", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251438", "accession": "AF165826.1.1066_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Symplegma_viride", "scientificNameID": "urn:lsid:marinespecies.org:taxname:212501", "accession": "DQ346655.1.1765_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_planus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215992", "accession": "DQ346653.1.1798_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botrylloides_violacea", "accession": "AY903927.1.1803_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_schlosseri", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103862", "accession": "AB211066.1.1750_U", "identity": 0.971, "query_cover": 0.9952 } ] }
organismQuantity	11.0

id	2ebb5970-14a2-4214-bf1c-ba4edf8cb859
scientificName	Symplegma
eventDate	2023-08-24
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-32
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Symplegma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:206885", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Symplegma_reptans", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251438", "accession": "AF165826.1.1066_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Symplegma_viride", "scientificNameID": "urn:lsid:marinespecies.org:taxname:212501", "accession": "DQ346655.1.1765_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_planus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215992", "accession": "DQ346653.1.1798_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botrylloides_violacea", "accession": "AY903927.1.1803_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_schlosseri", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103862", "accession": "AB211066.1.1750_U", "identity": 0.971, "query_cover": 0.9952 } ] }
organismQuantity	10.0

id	2462f72f-ca9d-4bd2-9775-f155746293c7
scientificName	Symplegma
eventDate	2023-08-24
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-34
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Symplegma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:206885", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Symplegma_reptans", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251438", "accession": "AF165826.1.1066_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Symplegma_viride", "scientificNameID": "urn:lsid:marinespecies.org:taxname:212501", "accession": "DQ346655.1.1765_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_planus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215992", "accession": "DQ346653.1.1798_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botrylloides_violacea", "accession": "AY903927.1.1803_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_schlosseri", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103862", "accession": "AB211066.1.1750_U", "identity": 0.971, "query_cover": 0.9952 } ] }
organismQuantity	8.0

id	dd3e9475-fb1c-4b35-827d-f70aa2a52f71
scientificName	Symplegma
eventDate	2023-08-24
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-33
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Symplegma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:206885", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Symplegma_reptans", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251438", "accession": "AF165826.1.1066_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Symplegma_viride", "scientificNameID": "urn:lsid:marinespecies.org:taxname:212501", "accession": "DQ346655.1.1765_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_planus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215992", "accession": "DQ346653.1.1798_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botrylloides_violacea", "accession": "AY903927.1.1803_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_schlosseri", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103862", "accession": "AB211066.1.1750_U", "identity": 0.971, "query_cover": 0.9952 } ] }
organismQuantity	8.0

id	fdc8a31e-8c30-4aab-9f62-81d7809fc593
scientificName	Symplegma
eventDate	2023-08-24
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-44
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Symplegma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:206885", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Symplegma_reptans", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251438", "accession": "AF165826.1.1066_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Symplegma_viride", "scientificNameID": "urn:lsid:marinespecies.org:taxname:212501", "accession": "DQ346655.1.1765_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_planus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215992", "accession": "DQ346653.1.1798_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botrylloides_violacea", "accession": "AY903927.1.1803_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_schlosseri", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103862", "accession": "AB211066.1.1750_U", "identity": 0.971, "query_cover": 0.9952 } ] }
organismQuantity	6.0

id	9dcd223a-585a-48cb-ab62-7cae905ec281
scientificName	Symplegma
eventDate	2023-08-24
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-31
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Symplegma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:206885", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Symplegma_reptans", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251438", "accession": "AF165826.1.1066_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Symplegma_viride", "scientificNameID": "urn:lsid:marinespecies.org:taxname:212501", "accession": "DQ346655.1.1765_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_planus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215992", "accession": "DQ346653.1.1798_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botrylloides_violacea", "accession": "AY903927.1.1803_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_schlosseri", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103862", "accession": "AB211066.1.1750_U", "identity": 0.971, "query_cover": 0.9952 } ] }
organismQuantity	5.0

id	37b68952-155a-4060-bd5b-378563ecae05
scientificName	Symplegma
eventDate	2023-08-24
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-46
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Symplegma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:206885", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Symplegma_reptans", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251438", "accession": "AF165826.1.1066_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Symplegma_viride", "scientificNameID": "urn:lsid:marinespecies.org:taxname:212501", "accession": "DQ346655.1.1765_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_planus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215992", "accession": "DQ346653.1.1798_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botrylloides_violacea", "accession": "AY903927.1.1803_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_schlosseri", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103862", "accession": "AB211066.1.1750_U", "identity": 0.971, "query_cover": 0.9952 } ] }
organismQuantity	4.0

id	05769a44-0648-486b-a236-f1c63280748e
scientificName	Symplegma
eventDate	2023-08-24
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-45
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Symplegma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:206885", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Symplegma_reptans", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251438", "accession": "AF165826.1.1066_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Symplegma_viride", "scientificNameID": "urn:lsid:marinespecies.org:taxname:212501", "accession": "DQ346655.1.1765_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_planus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215992", "accession": "DQ346653.1.1798_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botrylloides_violacea", "accession": "AY903927.1.1803_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_schlosseri", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103862", "accession": "AB211066.1.1750_U", "identity": 0.971, "query_cover": 0.9952 } ] }
organismQuantity	2.0

id	89c7158f-ab8b-408a-8286-d21fa7d207e2
scientificName	Symplegma
eventDate	2023-08-24
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-65
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAGGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Symplegma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:206885", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Symplegma_reptans", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251438", "accession": "AF165826.1.1066_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Symplegma_viride", "scientificNameID": "urn:lsid:marinespecies.org:taxname:212501", "accession": "DQ346655.1.1765_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_planus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215992", "accession": "DQ346653.1.1798_U", "identity": 0.971, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botrylloides_violacea", "accession": "AY903927.1.1803_U", "identity": 0.971, "query_cover": 0.9952 } ] }
organismQuantity	39.0

id	61698549-7eba-4cf9-abe3-f2ac0ce654fa
scientificName	Symplegma
eventDate	2023-08-24
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-65
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCCGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Symplegma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:206885", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Symplegma_reptans", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251438", "accession": "AF165826.1.1066_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Symplegma_viride", "scientificNameID": "urn:lsid:marinespecies.org:taxname:212501", "accession": "DQ346655.1.1765_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_planus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215992", "accession": "DQ346653.1.1798_U", "identity": 0.971, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botrylloides_violacea", "accession": "AY903927.1.1803_U", "identity": 0.971, "query_cover": 0.9952 } ] }
organismQuantity	7.0

id	ae2eabdf-eef4-4826-a564-1230a0191ea6
scientificName	Symplegma
eventDate	2023-08-24
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-64
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAGGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Symplegma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:206885", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Symplegma_reptans", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251438", "accession": "AF165826.1.1066_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Symplegma_viride", "scientificNameID": "urn:lsid:marinespecies.org:taxname:212501", "accession": "DQ346655.1.1765_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_planus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215992", "accession": "DQ346653.1.1798_U", "identity": 0.971, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botrylloides_violacea", "accession": "AY903927.1.1803_U", "identity": 0.971, "query_cover": 0.9952 } ] }
organismQuantity	7.0

id	0fdea3aa-6953-4f88-aa7d-dbe28507fc38
scientificName	Symplegma
eventDate	2023-08-24
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-65
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCAGTGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Symplegma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:206885", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Symplegma_reptans", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251438", "accession": "AF165826.1.1066_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Symplegma_viride", "scientificNameID": "urn:lsid:marinespecies.org:taxname:212501", "accession": "DQ346655.1.1765_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	14.0

Symplegma viride in Fiji

Status

Symplegma viride does not have an offial status in Fiji.

Notes

No notes found.