Occurrences: |
view occurrences
id |
cf4a2511-c18e-4509-a350-8fbf0854b18d
|
scientificName |
Monetaria annulus
|
AphiaID |
216875
|
eventDate |
2022-02-01
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
S95
|
target_gene |
COI
|
DNA_sequence |
TTTAGCCGGAAACCTTGCTCACGCAGGTGGGTCTGTAGATCTAGCTATTTTTTCTCTCCACCTAGCAGGTGTCTCATCTATTCTAGGTGCTGTAAACTTCATTACAACTATTATTAACATACGATGACGAGGCATGCAGTTTGAACGACTTCCCCTATTTGTATGATCTGTGAAAATTACTGCCATCCTACTTCTCCTCTCTCTACCAGTTTTAGCAGGTGCTATTACAATGTTATTAACAGACCGAAACTTTAACACCGCTTTCTTTGATCCAGCAGGAGGTGGAGACCCTATTTTATATCAACACCTGTTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "DQ206999",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monetaria obvelata",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:570809",
"accession": "DQ206996",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "DQ206998",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "MN389075",
"identity": 0.994,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "MZ559397",
"identity": 0.994,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
13.0
|
id |
06573b35-4154-418d-afe1-3c6ef2720686
|
scientificName |
Monetaria annulus
|
AphiaID |
216875
|
eventDate |
2022-02-01
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
materialSampleID |
S101
|
target_gene |
COI
|
DNA_sequence |
TTTAGCCGGAAACCTTGCTCACGCAGGTGGGTCTGTAGATCTAGCTATTTTTTCTCTCCACCTAGCAGGTGTCTCATCTATTCTGGGTGCTGTAAACTTCATTACAACTATTATTAACATACGATGACGAGGCATGCAGTTTGAACGACTTCCCCTATTTGTATGATCTGTGAAAATTACTGCCATCCTACTTCTCCTCTCTCTACCAGTTTTAGCAGGTGCTATTACAATGTTATTAACAGACCGAAACTTTAACACCGCTTTCTTTGATCCAGCAGGAGGTGGAGACCCTATTTTATACCAACACCTGTTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "DQ206998",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "DQ324060",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "MZ559430",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "MZ560054",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "DQ206995",
"identity": 0.997,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
9.0
|
id |
093e2832-6555-404c-944b-a31495fdd9c5
|
scientificName |
Monetaria annulus
|
AphiaID |
216875
|
eventDate |
2022-02-01
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
materialSampleID |
S100
|
target_gene |
COI
|
DNA_sequence |
TTTAGCCGGAAACCTTGCTCACGCAGGTGGGTCTGTAGATCTAGCTATTTTTTCTCTCCACCTAGCAGGTGTCTCATCTATTCTGGGTGCTGTAAACTTCATTACAACTATTATTAACATACGATGACGAGGCATGCAGTTTGAACGACTTCCCCTATTTGTATGATCTGTGAAAATTACTGCCATCCTACTTCTCCTCTCTCTACCAGTTTTAGCAGGTGCTATTACAATGTTATTAACAGACCGAAACTTTAACACCGCTTTCTTTGATCCAGCAGGAGGTGGAGACCCTATTTTATACCAACACCTGTTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "DQ206998",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "DQ324060",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "MZ559430",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "MZ560054",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "DQ206995",
"identity": 0.997,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
2.0
|
id |
3430b146-8cd2-40c2-965b-10a226063dc4
|
scientificName |
Monetaria annulus
|
AphiaID |
216875
|
eventDate |
2022-02-01
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
S93
|
target_gene |
COI
|
DNA_sequence |
TTTAGCCGGAAACCTTGCTCACGCAGGTGGGTCTGTAGATCTAGCTATTTTTTCTCTCCACCTAGCAGGTGTCTCATCTATTCTGGGTGCTGTAAACTTCATTACAACTATTATTAACATACGATGACGAGGCATGCAGTTTGAACGACTTCCCCTATTTGTATGATCTGTGAAAATTACTGCCATCCTACTTCTCCTCTCTCTACCAGTTTTAGCAGGTGCTATTACAATGTTATTAACAGACCGAAACTTTAACACCGCTTTCTTTGATCCAGCAGGAGGTGGAGACCCTATTTTATACCAACACCTGTTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "DQ206998",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "DQ324060",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "MZ559430",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "MZ560054",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "DQ206995",
"identity": 0.997,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
2.0
|
id |
9e3a63f4-900a-45ec-b187-b8adfb5dc5d8
|
scientificName |
Monetaria annulus
|
AphiaID |
216875
|
eventDate |
2022-02-01
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
materialSampleID |
S100
|
target_gene |
COI
|
DNA_sequence |
TTTAGCCGGAAACCTTGCTCACGCAGGTGGGTCTGTAGATCTAGCTATTTTTTCTCTCCACCTAGCAGGTGTCTCATCTATTCTAGGTGCTGTAAACTTCATTACAACTATTATTAACATACGATGACGAGGCATGCAGTTTGAACGACTTCCCCTATTTGTATGATCTGTGAAAATTACTGCCATCCTACTTCTCCTCTCTCTACCAGTTTTAGCAGGTGCTATTACAATGTTATTAACAGACCGAAACTTTAACACCGCTTTCTTTGATCCAGCAGGAGGTGGAGACCCTATTTTATATCAACACCTGTTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "DQ206999",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monetaria obvelata",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:570809",
"accession": "DQ206996",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "DQ206998",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "MN389075",
"identity": 0.994,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "MZ559397",
"identity": 0.994,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
1.0
|
id |
c0e42d36-5532-4b44-9ff1-38ac96e02ec8
|
scientificName |
Monetaria annulus
|
AphiaID |
216875
|
eventDate |
2022-02-01
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
materialSampleID |
S100
|
target_gene |
COI
|
DNA_sequence |
TTTAGCCGGAAACCTTGCTCACGCAGGTGGCTCTGTAGATCTAGCTATTTTTTCTCTCCACCTAGCAGGTGTCTCATCTATTCTAGGTGCTGTAAACTTCATTACAACTATTATTAACATACGATGACGAGGCATGCAGTTTGAACGACTTCCCTTATTTGTATGATCTGTGAAAATTACTGCCATCCTACTTCTCCTCTCTCTACCAGTTTTAGCAGGTGCTATTACAATGTTATTAACAGACCGAAACTTTAACACCGCTTTCTTTGATCCAGCAGGAGGTGGAGACCCTATTTTATACCAACACCTGTTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"confidence": 0.99
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "DQ206999",
"identity": 0.993,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "MN389075",
"identity": 0.99,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "MZ559397",
"identity": 0.99,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "MZ560055",
"identity": 0.99,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "AY161638",
"identity": 0.99,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
1.0
|
|