PacMAN decision support system

Potential detection of Symplegma viride in Fiji

Description:

Potential detection of Symplegma viride with confidence low on 2022-02-01 in material sample S5, marker 18S

Confidence:

low

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Symplegma viride
Chordata > Ascidiacea > Stolidobranchia > Styelidae
WoRMS: 212501

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

1.0

Reads:

110.0

Names:

4

Occurrences:

view occurrences

id	a71f068b-7f62-4796-a34f-2c5e24252ff4
scientificName	Symplegma
eventDate	2022-02-01
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S5
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Symplegma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:206885", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Symplegma_reptans", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251438", "accession": "AF165826.1.1066_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Symplegma_viride", "scientificNameID": "urn:lsid:marinespecies.org:taxname:212501", "accession": "DQ346655.1.1765_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_planus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215992", "accession": "DQ346653.1.1798_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botrylloides_violacea", "accession": "AY903927.1.1803_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_schlosseri", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103862", "accession": "AB211066.1.1750_U", "identity": 0.971, "query_cover": 0.9952 } ] }
organismQuantity	110.0

id	ca4e527b-5e33-4efb-b0a5-f3ea065048cb
scientificName	Symplegma
eventDate	2022-02-01
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S13
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Symplegma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:206885", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Symplegma_reptans", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251438", "accession": "AF165826.1.1066_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Symplegma_viride", "scientificNameID": "urn:lsid:marinespecies.org:taxname:212501", "accession": "DQ346655.1.1765_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_planus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215992", "accession": "DQ346653.1.1798_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botrylloides_violacea", "accession": "AY903927.1.1803_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_schlosseri", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103862", "accession": "AB211066.1.1750_U", "identity": 0.971, "query_cover": 0.9952 } ] }
organismQuantity	61.0

id	346f3071-0e22-409e-98da-12c0d08e7bee
scientificName	Symplegma
eventDate	2022-02-01
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S18
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Symplegma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:206885", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Symplegma_reptans", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251438", "accession": "AF165826.1.1066_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Symplegma_viride", "scientificNameID": "urn:lsid:marinespecies.org:taxname:212501", "accession": "DQ346655.1.1765_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_planus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215992", "accession": "DQ346653.1.1798_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botrylloides_violacea", "accession": "AY903927.1.1803_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_schlosseri", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103862", "accession": "AB211066.1.1750_U", "identity": 0.971, "query_cover": 0.9952 } ] }
organismQuantity	30.0

id	b23efe38-a0a4-4096-90a5-5badff9a3d81
scientificName	Symplegma
eventDate	2022-02-01
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S42
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Symplegma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:206885", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Symplegma_reptans", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251438", "accession": "AF165826.1.1066_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Symplegma_viride", "scientificNameID": "urn:lsid:marinespecies.org:taxname:212501", "accession": "DQ346655.1.1765_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_planus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215992", "accession": "DQ346653.1.1798_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botrylloides_violacea", "accession": "AY903927.1.1803_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_schlosseri", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103862", "accession": "AB211066.1.1750_U", "identity": 0.971, "query_cover": 0.9952 } ] }
organismQuantity	23.0

id	77f17ee4-e604-4a57-a567-3d5455d15e27
scientificName	Symplegma
eventDate	2022-02-01
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S15
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Symplegma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:206885", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Symplegma_reptans", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251438", "accession": "AF165826.1.1066_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Symplegma_viride", "scientificNameID": "urn:lsid:marinespecies.org:taxname:212501", "accession": "DQ346655.1.1765_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_planus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215992", "accession": "DQ346653.1.1798_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botrylloides_violacea", "accession": "AY903927.1.1803_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_schlosseri", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103862", "accession": "AB211066.1.1750_U", "identity": 0.971, "query_cover": 0.9952 } ] }
organismQuantity	13.0

id	2f866ad7-5cb6-4bc2-951c-5d8ea00958c1
scientificName	Symplegma
eventDate	2022-02-01
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S16
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Symplegma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:206885", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Symplegma_reptans", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251438", "accession": "AF165826.1.1066_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Symplegma_viride", "scientificNameID": "urn:lsid:marinespecies.org:taxname:212501", "accession": "DQ346655.1.1765_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_planus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215992", "accession": "DQ346653.1.1798_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botrylloides_violacea", "accession": "AY903927.1.1803_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_schlosseri", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103862", "accession": "AB211066.1.1750_U", "identity": 0.971, "query_cover": 0.9952 } ] }
organismQuantity	11.0

id	938d2659-9e95-4898-8a7e-9474a5139367
scientificName	Symplegma
eventDate	2022-02-01
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S39
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Symplegma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:206885", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Symplegma_reptans", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251438", "accession": "AF165826.1.1066_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Symplegma_viride", "scientificNameID": "urn:lsid:marinespecies.org:taxname:212501", "accession": "DQ346655.1.1765_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_planus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215992", "accession": "DQ346653.1.1798_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botrylloides_violacea", "accession": "AY903927.1.1803_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_schlosseri", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103862", "accession": "AB211066.1.1750_U", "identity": 0.971, "query_cover": 0.9952 } ] }
organismQuantity	7.0

id	6fac6c7a-7aea-4ae8-9f1d-c7ded790a79d
scientificName	Symplegma
eventDate	2022-02-01
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S20
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Symplegma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:206885", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Symplegma_reptans", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251438", "accession": "AF165826.1.1066_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Symplegma_viride", "scientificNameID": "urn:lsid:marinespecies.org:taxname:212501", "accession": "DQ346655.1.1765_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_planus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215992", "accession": "DQ346653.1.1798_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botrylloides_violacea", "accession": "AY903927.1.1803_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_schlosseri", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103862", "accession": "AB211066.1.1750_U", "identity": 0.971, "query_cover": 0.9952 } ] }
organismQuantity	4.0

id	95a49636-bca5-464e-bf58-495702ae47e4
scientificName	Symplegma
eventDate	2022-02-01
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S17
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Symplegma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:206885", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Symplegma_reptans", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251438", "accession": "AF165826.1.1066_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Symplegma_viride", "scientificNameID": "urn:lsid:marinespecies.org:taxname:212501", "accession": "DQ346655.1.1765_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_planus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215992", "accession": "DQ346653.1.1798_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botrylloides_violacea", "accession": "AY903927.1.1803_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_schlosseri", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103862", "accession": "AB211066.1.1750_U", "identity": 0.971, "query_cover": 0.9952 } ] }
organismQuantity	4.0

id	42615545-41e0-4e6c-b72c-422f2f4eb45a
scientificName	Symplegma
eventDate	2022-02-01
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S19
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Symplegma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:206885", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Symplegma_reptans", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251438", "accession": "AF165826.1.1066_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Symplegma_viride", "scientificNameID": "urn:lsid:marinespecies.org:taxname:212501", "accession": "DQ346655.1.1765_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_planus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215992", "accession": "DQ346653.1.1798_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botrylloides_violacea", "accession": "AY903927.1.1803_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_schlosseri", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103862", "accession": "AB211066.1.1750_U", "identity": 0.971, "query_cover": 0.9952 } ] }
organismQuantity	2.0

id	08a2b7b4-c964-4bbf-bab6-cf113ea3e58e
scientificName	Symplegma
eventDate	2022-02-01
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S1
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Symplegma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:206885", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Symplegma_reptans", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251438", "accession": "AF165826.1.1066_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Symplegma_viride", "scientificNameID": "urn:lsid:marinespecies.org:taxname:212501", "accession": "DQ346655.1.1765_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_planus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215992", "accession": "DQ346653.1.1798_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botrylloides_violacea", "accession": "AY903927.1.1803_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_schlosseri", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103862", "accession": "AB211066.1.1750_U", "identity": 0.971, "query_cover": 0.9952 } ] }
organismQuantity	1.0

id	5ea39a70-ddf7-48ea-99a1-af523bed4769
scientificName	Symplegma
eventDate	2022-02-01
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S11
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Symplegma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:206885", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Symplegma_reptans", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251438", "accession": "AF165826.1.1066_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Symplegma_viride", "scientificNameID": "urn:lsid:marinespecies.org:taxname:212501", "accession": "DQ346655.1.1765_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_planus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215992", "accession": "DQ346653.1.1798_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botrylloides_violacea", "accession": "AY903927.1.1803_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_schlosseri", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103862", "accession": "AB211066.1.1750_U", "identity": 0.971, "query_cover": 0.9952 } ] }
organismQuantity	1.0

id	6a89298f-b0e3-4755-a8b7-58d242d7f591
scientificName	Symplegma
eventDate	2022-02-01
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S7
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Symplegma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:206885", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Symplegma_reptans", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251438", "accession": "AF165826.1.1066_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Symplegma_viride", "scientificNameID": "urn:lsid:marinespecies.org:taxname:212501", "accession": "DQ346655.1.1765_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_planus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215992", "accession": "DQ346653.1.1798_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botrylloides_violacea", "accession": "AY903927.1.1803_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_schlosseri", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103862", "accession": "AB211066.1.1750_U", "identity": 0.971, "query_cover": 0.9952 } ] }
organismQuantity	1.0

id	893a7255-bc81-4f57-8f88-c66b462aa25a
scientificName	Symplegma
eventDate	2022-02-01
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S14
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Symplegma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:206885", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Symplegma_reptans", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251438", "accession": "AF165826.1.1066_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Symplegma_viride", "scientificNameID": "urn:lsid:marinespecies.org:taxname:212501", "accession": "DQ346655.1.1765_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_planus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215992", "accession": "DQ346653.1.1798_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botrylloides_violacea", "accession": "AY903927.1.1803_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_schlosseri", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103862", "accession": "AB211066.1.1750_U", "identity": 0.971, "query_cover": 0.9952 } ] }
organismQuantity	1.0

id	c4a14063-b205-4d5d-aaf3-8def1330ce28
scientificName	Symplegma
eventDate	2022-02-01
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S2
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Symplegma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:206885", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Symplegma_reptans", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251438", "accession": "AF165826.1.1066_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Symplegma_viride", "scientificNameID": "urn:lsid:marinespecies.org:taxname:212501", "accession": "DQ346655.1.1765_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_planus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215992", "accession": "DQ346653.1.1798_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botrylloides_violacea", "accession": "AY903927.1.1803_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_schlosseri", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103862", "accession": "AB211066.1.1750_U", "identity": 0.971, "query_cover": 0.9952 } ] }
organismQuantity	1.0

id	dece905f-abff-44b9-b24e-417edb83accc
scientificName	Symplegma
eventDate	2022-02-01
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S16
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCAGTGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Symplegma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:206885", "confidence": 0.99 }, { "method": "VSEARCH", "scientificName": "Symplegma_reptans", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251438", "accession": "AF165826.1.1066_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Symplegma_viride", "scientificNameID": "urn:lsid:marinespecies.org:taxname:212501", "accession": "DQ346655.1.1765_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	5.0

id	b5e591b1-1dfe-4dc9-9857-94704b48d19d
scientificName	Symplegma
eventDate	2022-02-01
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S5
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGGGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCAGTGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Symplegma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:206885", "confidence": 0.99 }, { "method": "VSEARCH", "scientificName": "Symplegma_reptans", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251438", "accession": "AF165826.1.1066_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Symplegma_viride", "scientificNameID": "urn:lsid:marinespecies.org:taxname:212501", "accession": "DQ346655.1.1765_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	3.0

id	068fffcf-e07e-4fb4-9573-7ab717f295ff
scientificName	Symplegma
eventDate	2022-02-01
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S5
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAATTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGGCGGGCGCGGTCGGTCCGTCGCAGCGCGTGCACTGGTCGCGTCCGCCTCGCCTTCGGTTCTTCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Symplegma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:206885", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Symplegma_reptans", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251438", "accession": "AF165826.1.1066_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Symplegma_viride", "scientificNameID": "urn:lsid:marinespecies.org:taxname:212501", "accession": "DQ346655.1.1765_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	2.0

Symplegma viride in Fiji

Status

Symplegma viride does not have an offial status in Fiji.

Notes

No notes found.