Occurrences: |
view occurrences
id |
1c343ff1-70c5-415e-b244-648ac72eac60
|
scientificName |
Ascidia sydneiensis var. samea
|
AphiaID |
215940
|
eventDate |
2023-08-24
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
USP-24-01-65
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGTCGGTCCGTCGCAAGGCGTGCACTGACCGTCCTGGCCTCACCCCCGGTTCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Ascidia sydneiensis samea",
"confidence": 0.88
},
{
"method": "VSEARCH",
"scientificName": "Ascidia_sydneiensis_samea",
"accession": "AF165819.1.1065_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Ascidiella_sp.",
"accession": "FM244843.1.1766_U",
"identity": 0.976,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
3251.0
|
id |
1c06d827-213e-4ebd-ac93-b9e9e7f86e4a
|
scientificName |
Ascidia sydneiensis var. samea
|
AphiaID |
215940
|
eventDate |
2023-08-24
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
materialSampleID |
USP-24-01-64
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGTCGGTCCGTCGCAAGGCGTGCACTGACCGTCCTGGCCTCACCCCCGGTTCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Ascidia sydneiensis samea",
"confidence": 0.88
},
{
"method": "VSEARCH",
"scientificName": "Ascidia_sydneiensis_samea",
"accession": "AF165819.1.1065_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Ascidiella_sp.",
"accession": "FM244843.1.1766_U",
"identity": 0.976,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
69.0
|
id |
5effb1f0-f5d3-41c9-b290-5f99e192894a
|
scientificName |
Ascidia sydneiensis var. samea
|
AphiaID |
215940
|
eventDate |
2023-08-24
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
USP-24-01-65
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGTCGGTCCGTCGCAAGGCGTGCACTGACCGTCCTGGCCTCACCCCCGGTTCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Ascidia sydneiensis samea",
"confidence": 0.9
},
{
"method": "VSEARCH",
"scientificName": "Ascidia_sydneiensis_samea",
"accession": "AF165819.1.1065_U",
"identity": 0.986,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
67.0
|
id |
6c117df5-bf96-4753-929d-23b05794bce2
|
scientificName |
Ascidia sydneiensis var. samea
|
AphiaID |
215940
|
eventDate |
2023-08-24
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
USP-24-01-65
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGTCGGTCCGTCGCAAGGCGTGCACTGACCGTCCTGGCCTCACCCCCGGTACTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Ascidia sydneiensis samea",
"confidence": 0.91
},
{
"method": "VSEARCH",
"scientificName": "Ascidia_sydneiensis_samea",
"accession": "AF165819.1.1065_U",
"identity": 0.99,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Ascidiella_sp.",
"accession": "FM244843.1.1766_U",
"identity": 0.971,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
28.0
|
id |
ce581832-4541-4a8b-93ef-854265279e6f
|
scientificName |
Ascidia sydneiensis var. samea
|
AphiaID |
215940
|
eventDate |
2023-08-24
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
USP-24-01-33
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGTCGGTCCGTCGCAAGGCGTGCACTGACCGTCCTGGCCTCACCCCCGGTTCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Ascidia sydneiensis samea",
"confidence": 0.88
},
{
"method": "VSEARCH",
"scientificName": "Ascidia_sydneiensis_samea",
"accession": "AF165819.1.1065_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Ascidiella_sp.",
"accession": "FM244843.1.1766_U",
"identity": 0.976,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
8.0
|
id |
4b6d6279-8536-417f-8fc9-e8f6725853b4
|
scientificName |
Ascidia sydneiensis var. samea
|
AphiaID |
215940
|
eventDate |
2023-08-24
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
materialSampleID |
USP-24-01-64
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGTCGGTCCGTCGCAAGGCGTGCACTGACCGTCCTGGCCTCACCCCCGGTTCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Ascidia sydneiensis samea",
"confidence": 0.9
},
{
"method": "VSEARCH",
"scientificName": "Ascidia_sydneiensis_samea",
"accession": "AF165819.1.1065_U",
"identity": 0.986,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
4.0
|
id |
20e8961e-230b-40ed-ad71-2c31337917aa
|
scientificName |
Ascidia sydneiensis var. samea
|
AphiaID |
215940
|
eventDate |
2023-08-24
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
USP-24-01-33
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGTCGGTCCGTCGCAAGGCGTGCACTGACCGTCCTGGCCTCACCCCCGGTACTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Ascidia sydneiensis samea",
"confidence": 0.91
},
{
"method": "VSEARCH",
"scientificName": "Ascidia_sydneiensis_samea",
"accession": "AF165819.1.1065_U",
"identity": 0.99,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Ascidiella_sp.",
"accession": "FM244843.1.1766_U",
"identity": 0.971,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
3.0
|
id |
73a7263f-adbf-4c17-a02f-6d9d89ce4343
|
scientificName |
Ascidia sydneiensis var. samea
|
AphiaID |
215940
|
eventDate |
2023-08-24
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
materialSampleID |
USP-24-01-43
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGTCGGTCCGTCGCAAGGCGTGCACTGACCGTCCTGGCCTCACCCCCGGTTCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Ascidia sydneiensis samea",
"confidence": 0.88
},
{
"method": "VSEARCH",
"scientificName": "Ascidia_sydneiensis_samea",
"accession": "AF165819.1.1065_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Ascidiella_sp.",
"accession": "FM244843.1.1766_U",
"identity": 0.976,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
3.0
|
id |
11eef745-e513-42df-86ce-8149c9d7d437
|
scientificName |
Ascidia sydneiensis var. samea
|
AphiaID |
215940
|
eventDate |
2023-08-24
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
materialSampleID |
USP-24-01-31
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGTCGGTCCGTCGCAAGGCGTGCACTGACCGTCCTGGCCTCACCCCCGGTTCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Ascidia sydneiensis samea",
"confidence": 0.88
},
{
"method": "VSEARCH",
"scientificName": "Ascidia_sydneiensis_samea",
"accession": "AF165819.1.1065_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Ascidiella_sp.",
"accession": "FM244843.1.1766_U",
"identity": 0.976,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
2.0
|
id |
92b7a7e8-3739-41f2-bc68-88e983e0f4bd
|
scientificName |
Ascidia sydneiensis var. samea
|
AphiaID |
215940
|
eventDate |
2023-08-24
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
materialSampleID |
USP-24-01-30
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGTCGGTCCGTCGCAAGGCGTGCACTGACCGTCCTGGCCTCACCCCCGGTTCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Ascidia sydneiensis samea",
"confidence": 0.88
},
{
"method": "VSEARCH",
"scientificName": "Ascidia_sydneiensis_samea",
"accession": "AF165819.1.1065_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Ascidiella_sp.",
"accession": "FM244843.1.1766_U",
"identity": 0.976,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
2.0
|
id |
06f2b9bf-4b51-4581-9250-38e1f01aa426
|
scientificName |
Ascidia sydneiensis var. samea
|
AphiaID |
215940
|
eventDate |
2023-08-24
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
USP-24-01-32
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGTCGGTCCGTCGCAAGGCGTGCACTGACCGTCCTGGCCTCACCCCCGGTTCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Ascidia sydneiensis samea",
"confidence": 0.88
},
{
"method": "VSEARCH",
"scientificName": "Ascidia_sydneiensis_samea",
"accession": "AF165819.1.1065_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Ascidiella_sp.",
"accession": "FM244843.1.1766_U",
"identity": 0.976,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
1.0
|
id |
44ddd150-6e9d-4fa3-89d0-41ca747eb7de
|
scientificName |
Ascidia sydneiensis var. samea
|
AphiaID |
215940
|
eventDate |
2023-08-24
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
USP-24-01-34
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGTCGGTCCGTCGCAAGGCGTGCACTGACCGTCCTGGCCTCACCCCCGGTTCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Ascidia sydneiensis samea",
"confidence": 0.88
},
{
"method": "VSEARCH",
"scientificName": "Ascidia_sydneiensis_samea",
"accession": "AF165819.1.1065_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Ascidiella_sp.",
"accession": "FM244843.1.1766_U",
"identity": 0.976,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
1.0
|
id |
68bf54d9-3cc6-4c28-b614-d54e2fe70551
|
scientificName |
Ascidia sydneiensis var. samea
|
AphiaID |
215940
|
eventDate |
2023-08-24
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
materialSampleID |
USP-24-01-43
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGTCGGTCCGTCGCAAGGCGTGCACTGACCGTCCTGGCCTCACCCCCGGTACTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Ascidia sydneiensis samea",
"confidence": 0.91
},
{
"method": "VSEARCH",
"scientificName": "Ascidia_sydneiensis_samea",
"accession": "AF165819.1.1065_U",
"identity": 0.99,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Ascidiella_sp.",
"accession": "FM244843.1.1766_U",
"identity": 0.971,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
1.0
|
id |
89b6d645-3ffa-4def-bf2f-498e652322c8
|
scientificName |
Ascidia sydneiensis var. samea
|
AphiaID |
215940
|
eventDate |
2023-08-24
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
materialSampleID |
USP-24-01-30
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGTCGGTCCGTCGCAAGGCGTGCACTGACCGTCCTGGCCTCACCCCCGGTACTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Ascidia sydneiensis samea",
"confidence": 0.91
},
{
"method": "VSEARCH",
"scientificName": "Ascidia_sydneiensis_samea",
"accession": "AF165819.1.1065_U",
"identity": 0.99,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Ascidiella_sp.",
"accession": "FM244843.1.1766_U",
"identity": 0.971,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
1.0
|
id |
a35773b8-8a8b-4888-ad04-249d41e22f31
|
scientificName |
Ascidia sydneiensis var. samea
|
AphiaID |
215940
|
eventDate |
2023-08-24
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
USP-24-01-32
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGTCGGTCCGTCGCAAGGCGTGCACTGACCGTCCTGGCCTCACCCCCGGTACTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Ascidia sydneiensis samea",
"confidence": 0.91
},
{
"method": "VSEARCH",
"scientificName": "Ascidia_sydneiensis_samea",
"accession": "AF165819.1.1065_U",
"identity": 0.99,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Ascidiella_sp.",
"accession": "FM244843.1.1766_U",
"identity": 0.971,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
1.0
|
id |
c4b34896-4f3f-4862-8e83-fe3053b86d4d
|
scientificName |
Ascidia sydneiensis var. samea
|
AphiaID |
215940
|
eventDate |
2023-08-24
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
materialSampleID |
USP-24-01-44
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGTCGGTCCGTCGCAAGGCGTGCACTGACCGTCCTGGCCTCACCCCCGGTTCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Ascidia sydneiensis samea",
"confidence": 0.9
},
{
"method": "VSEARCH",
"scientificName": "Ascidia_sydneiensis_samea",
"accession": "AF165819.1.1065_U",
"identity": 0.986,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
1.0
|
id |
eedb7a7a-2387-4ce0-9ae1-addc28bffe29
|
scientificName |
Ascidia sydneiensis var. samea
|
AphiaID |
215940
|
eventDate |
2023-08-24
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
USP-24-01-33
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGTCGGTCCGTCGCAAGGCGTGCACTGACCGTCCTGGCCTCACCCCCGGTTCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Ascidia sydneiensis samea",
"confidence": 0.9
},
{
"method": "VSEARCH",
"scientificName": "Ascidia_sydneiensis_samea",
"accession": "AF165819.1.1065_U",
"identity": 0.986,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
1.0
|
|