PacMAN decision support system

Potential detection of Clytia linearis in Fiji

Description:

Potential detection of Clytia linearis with confidence medium on 2023-08-15 in material sample USP-24-01-56, marker 18S

Confidence:

medium

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Clytia linearis
Cnidaria > Hydrozoa > Leptothecata > Campanulariidae
WoRMS: 117370

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

1.0

Reads:

795.0

Names:

1

Occurrences:

view occurrences

id	181eb718-efcd-4562-ad5e-02d84c2739c7
scientificName	Clytia linearis
AphiaID	117370
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-56
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTGGGGCGCTGGTGGGACGGTCGGCCGCGAGGTCTGTTACTGTCTCTCCGTGCCATCACATTCTCGGAGACCCGTCGTGCACTTCGCTGTGCGCGGCGTGGGACTCGAGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Clytia linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "AY789747.1.1693_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "DQ064794.1.1691_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "AY789748.1.1565_U", "identity": 1, "query_cover": 0.9952 } ] }
organismQuantity	795.0

id	a3ab36d1-9521-4567-85fe-6085e4698823
scientificName	Clytia
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-56
target_gene	18S
DNA_sequence	TTGTTGGTTTCTAAAACCGCAGTAATGATTAAGAGGGACAATTGGGGGCGTCCGTATTTCGTTGTCAGAGGTGAAATTCTTGGATTTACGAAAGACGAACAACTGCGAAAGCATTCGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Clytia", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117030", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "AY789747.1.1693_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "DQ064794.1.1691_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "AY789748.1.1565_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Clytia_sp.", "accession": "KF962233.1.1714_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Clytia_sp.", "accession": "KF962234.1.1714_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	715.0

id	07225a09-711a-4a99-a344-fccc66c14268
scientificName	Clytia
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-54
target_gene	18S
DNA_sequence	TTGTTGGTTTCTAAAACCGCAGTAATGATTAAGAGGGACAATTGGGGGCGTCCGTATTTCGTTGTCAGAGGTGAAATTCTTGGATTTACGAAAGACGAACAACTGCGAAAGCATTCGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Clytia", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117030", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "AY789747.1.1693_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "DQ064794.1.1691_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "AY789748.1.1565_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Clytia_sp.", "accession": "KF962233.1.1714_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Clytia_sp.", "accession": "KF962234.1.1714_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	11.0

id	c2b0807e-57bc-4bc3-a5bd-936f3d536c68
scientificName	Clytia
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-49
target_gene	18S
DNA_sequence	TTGTTGGTTTCTAAAACCGCAGTAATGATTAAGAGGGACAATTGGGGGCGTCCGTATTTCGTTGTCAGAGGTGAAATTCTTGGATTTACGAAAGACGAACAACTGCGAAAGCATTCGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Clytia", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117030", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "AY789747.1.1693_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "DQ064794.1.1691_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "AY789748.1.1565_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Clytia_sp.", "accession": "KF962233.1.1714_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Clytia_sp.", "accession": "KF962234.1.1714_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	8.0

id	14a1d1c3-6552-4771-86ec-416a9bb90207
scientificName	Clytia
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-57
target_gene	18S
DNA_sequence	TTGTTGGTTTCTAAAACCGCAGTAATGATTAAGAGGGACAATTGGGGGCGTCCGTATTTCGTTGTCAGAGGTGAAATTCTTGGATTTACGAAAGACGAACAACTGCGAAAGCATTCGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Clytia", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117030", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "AY789747.1.1693_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "DQ064794.1.1691_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "AY789748.1.1565_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Clytia_sp.", "accession": "KF962233.1.1714_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Clytia_sp.", "accession": "KF962234.1.1714_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	3.0

id	8093ac5c-a9f2-4ca2-bf37-c4b979788854
scientificName	Clytia linearis
AphiaID	117370
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-49
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTGGGGCGCTGGTGGGACGGTCGGCCGCGAGGTCTGTTACTGTCTCTCCGTGCCATCACATTCTCGGAGACCCGTCGTGCACTTCGCTGTGCGCGGCGTGGGACTCGAGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Clytia linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "AY789747.1.1693_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "DQ064794.1.1691_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "AY789748.1.1565_U", "identity": 1, "query_cover": 0.9952 } ] }
organismQuantity	3.0

id	8258786e-d7cf-42aa-9821-cc2ae5eb2ff4
scientificName	Clytia linearis
AphiaID	117370
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-56
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTGGGGCGCTGGTGGGACGGTCGGCCGCGAGGTCTGTTACTGTCTCTCCGTGCCATCACATTCTCGGAGACCCGTCGTGCACTTCGCTGTTCGCGGCGTGGGACTCGAGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Clytia linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "AY789747.1.1693_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "DQ064794.1.1691_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "AY789748.1.1565_U", "identity": 0.995, "query_cover": 0.9952 } ] }
organismQuantity	386.0

id	3dc65006-cd5e-41ec-9e73-61c448c66940
scientificName	Clytia linearis
AphiaID	117370
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-49
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTGGGGCGCTGGTGGGACGGTCGGCCGCGAGGTCTGTTACTGTCTCTCCGTGCCATCACATTCTCGGAGACCCGTCGTGCACTTCGCTGTTCGCGGCGTGGGACTCGAGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Clytia linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "AY789747.1.1693_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "DQ064794.1.1691_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "AY789748.1.1565_U", "identity": 0.995, "query_cover": 0.9952 } ] }
organismQuantity	1.0

id	cb5a7607-3ea4-4f96-b710-7fe5044d3309
scientificName	Clytia
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-56
target_gene	18S
DNA_sequence	TTGTTGGTTTCTAAAACCGCAGTAATGATTAAGAGGGACAATTGGGGGCGTCCGTATTTCGTTGTCAGAGGTGAAATTCTTGGATTTGCGAAAGACGAACAACTGCGAAAGCATTCGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Clytia", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117030", "confidence": 0.93 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "AY789747.1.1693_U", "identity": 0.994, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "DQ064794.1.1691_U", "identity": 0.994, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "AY789748.1.1565_U", "identity": 0.994, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Clytia_sp.", "accession": "KF962233.1.1714_U", "identity": 0.994, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Clytia_sp.", "accession": "KF962234.1.1714_U", "identity": 0.994, "query_cover": 0.9938 } ] }
organismQuantity	378.0

id	c4f51530-6fed-4c52-91d2-82fbf5f50eb9
scientificName	Clytia
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-49
target_gene	18S
DNA_sequence	TTGTTGGTTTCTAAAACCGCAGTAATGATTAAGAGGGACAATTGGGGGCGTCCGTATTTCGTTGTCAGAGGTGAAATTCTTGGATTTGCGAAAGACGAACAACTGCGAAAGCATTCGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Clytia", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117030", "confidence": 0.93 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "AY789747.1.1693_U", "identity": 0.994, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "DQ064794.1.1691_U", "identity": 0.994, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "AY789748.1.1565_U", "identity": 0.994, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Clytia_sp.", "accession": "KF962233.1.1714_U", "identity": 0.994, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Clytia_sp.", "accession": "KF962234.1.1714_U", "identity": 0.994, "query_cover": 0.9938 } ] }
organismQuantity	1.0

Clytia linearis in Fiji

Status

Clytia linearis does not have an offial status in Fiji.

Notes

No notes found.