PacMAN decision support system

Potential detection of Syllis bella in Fiji

Description:

Potential detection of Syllis bella with confidence low on 2023-04-27 in material sample USP-24-01-03, marker 18S

Confidence:

low

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Syllis bella
Annelida > Polychaeta > Phyllodocida > Syllidae
WoRMS: 241241

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

Reads:

3.0

Names:

Occurrences:

view occurrences

id	07616b67-f8d2-4e3b-b07a-b0ab489f7ed7
scientificName	Syllis bella
AphiaID	241241
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-03
target_gene	18S
DNA_sequence	TTGTTGGTTTCTAGAACTGAAGTAATGATTAATAGGGACAGTTGGGGGCATTCGAATTTAGCTGTCAGAGGTGAAATTCTTAGATTTGCTAAAGACGAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTAGGGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Typosyllis bella", "scientificNameID": "urn:lsid:marinespecies.org:taxname:332284", "confidence": 0.93 }, { "method": "VSEARCH", "scientificName": "Typosyllis_bella", "scientificNameID": "urn:lsid:marinespecies.org:taxname:332284", "accession": "JF913971.1.1725_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Sarcocystis10 gallotiae", "accession": "AY015112.1.1591_U", "identity": 0.975, "query_cover": 0.9938 } ] }
organismQuantity	3.0

id	65f159a4-6b6c-411d-8a34-207410b5bb97
scientificName	Syllis bella
AphiaID	241241
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-02
target_gene	18S
DNA_sequence	TTGTTGGTTTCTAGAACTGAAGTAATGATTAATAGGGACAGTTGGGGGCATTCGAATTTAGCTGTCAGAGGTGAAATTCTTAGATTTGCTAAAGACGAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTAGGGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Typosyllis bella", "scientificNameID": "urn:lsid:marinespecies.org:taxname:332284", "confidence": 0.93 }, { "method": "VSEARCH", "scientificName": "Typosyllis_bella", "scientificNameID": "urn:lsid:marinespecies.org:taxname:332284", "accession": "JF913971.1.1725_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Sarcocystis10 gallotiae", "accession": "AY015112.1.1591_U", "identity": 0.975, "query_cover": 0.9938 } ] }
organismQuantity	3.0

id	4eb60c0a-d66f-4eb9-bd12-58ebfe75ff94
scientificName	Syllis bella
AphiaID	241241
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-12
target_gene	18S
DNA_sequence	TTGTTGGTTTCTAGAACTGAAGTAATGATTAATAGGGACAGTTGGGGGCATTCGAATTTAGCTGTCAGAGGTGAAATTCTTAGATTTGCTAAAGACGAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTAGGGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Typosyllis bella", "scientificNameID": "urn:lsid:marinespecies.org:taxname:332284", "confidence": 0.93 }, { "method": "VSEARCH", "scientificName": "Typosyllis_bella", "scientificNameID": "urn:lsid:marinespecies.org:taxname:332284", "accession": "JF913971.1.1725_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Sarcocystis10 gallotiae", "accession": "AY015112.1.1591_U", "identity": 0.975, "query_cover": 0.9938 } ] }
organismQuantity	2.0

id	2ade2db8-809f-4740-a954-c0c4fe93dc61
scientificName	Syllis bella
AphiaID	241241
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-13
target_gene	18S
DNA_sequence	TTGTTGGTTTCTAGAACTGAAGTAATGATTAATAGGGACAGTTGGGGGCATTCGAATTTAGCTGTCAGAGGTGAAATTCTTAGATTTGCTAAAGACGAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTAGGGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Typosyllis bella", "scientificNameID": "urn:lsid:marinespecies.org:taxname:332284", "confidence": 0.93 }, { "method": "VSEARCH", "scientificName": "Typosyllis_bella", "scientificNameID": "urn:lsid:marinespecies.org:taxname:332284", "accession": "JF913971.1.1725_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Sarcocystis10 gallotiae", "accession": "AY015112.1.1591_U", "identity": 0.975, "query_cover": 0.9938 } ] }
organismQuantity	1.0

id	62176225-3a29-48aa-8fbb-e7e330237b96
scientificName	Syllis bella
AphiaID	241241
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-19
target_gene	18S
DNA_sequence	TTGTTGGTTTCTAGAACTGAAGTAATGATTAATAGGGACAGTTGGGGGCATTCGAATTTAGCTGTCAGAGGTGAAATTCTTAGATTTGCTAAAGACGAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTAGGGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Typosyllis bella", "scientificNameID": "urn:lsid:marinespecies.org:taxname:332284", "confidence": 0.93 }, { "method": "VSEARCH", "scientificName": "Typosyllis_bella", "scientificNameID": "urn:lsid:marinespecies.org:taxname:332284", "accession": "JF913971.1.1725_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Sarcocystis10 gallotiae", "accession": "AY015112.1.1591_U", "identity": 0.975, "query_cover": 0.9938 } ] }
organismQuantity	1.0

Syllis bella does not have an offial status in Fiji.

No notes found.