PacMAN decision support system

Potential detection of Microcosmus squamiger in Fiji

Description:

Potential detection of Microcosmus squamiger with confidence low on 2023-04-27 in material sample USP-24-01-01, marker 18S

Confidence:

low

Risk:

high priority view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Microcosmus squamiger
Chordata > Ascidiacea > Stolidobranchia > Pyuridae
WoRMS: 236666

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

0.995

Reads:

1183.0

Names:

4

Priority lists:

Top 25 Marine non-indigenous species for the Pacific region

Occurrences:

view occurrences

id	5864d238-f18f-4463-8aea-a406361a6548
scientificName	Microcosmus
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-01
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGCTGGGCGCCGCCGGTCCGTCGCAAGGCGTGTTACTGGCGGCGCTCTCCCCCGATTTTCGGTTCGCCCGATCGGTGCTCTTGACTGAGTGTCGTCGGTGGCCGATGAGATTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Microcosmus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103522", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Microcosmus_squamiger", "scientificNameID": "urn:lsid:marinespecies.org:taxname:236666", "accession": "FM244855.1.1786_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Microcosmus_exasperatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103838", "accession": "KT387603.1.1766_U", "identity": 0.995, "query_cover": 0.9952 } ] }
organismQuantity	1183.0

id	7e13529e-b052-4e7c-8300-8592f8a1434a
scientificName	Microcosmus
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-10
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGCTGGGCGCCGCCGGTCCGTCGCAAGGCGTGTTACTGGCGGCGCTCTCCCCCGATTTTCGGTTCGCCCGATCGGTGCTCTTGACTGAGTGTCGTCGGTGGCCGATGAGATTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Microcosmus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103522", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Microcosmus_squamiger", "scientificNameID": "urn:lsid:marinespecies.org:taxname:236666", "accession": "FM244855.1.1786_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Microcosmus_exasperatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103838", "accession": "KT387603.1.1766_U", "identity": 0.995, "query_cover": 0.9952 } ] }
organismQuantity	956.0

id	9fe0c887-4668-4d44-9562-908eab024ce5
scientificName	Microcosmus
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-09
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGCTGGGCGCCGCCGGTCCGTCGCAAGGCGTGTTACTGGCGGCGCTCTCCCCCGATTTTCGGTTCGCCCGATCGGTGCTCTTGACTGAGTGTCGTCGGTGGCCGATGAGATTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Microcosmus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103522", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Microcosmus_squamiger", "scientificNameID": "urn:lsid:marinespecies.org:taxname:236666", "accession": "FM244855.1.1786_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Microcosmus_exasperatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103838", "accession": "KT387603.1.1766_U", "identity": 0.995, "query_cover": 0.9952 } ] }
organismQuantity	13.0

id	e432464f-b26a-474f-b2c9-06ff45a864bd
scientificName	Microcosmus
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-03
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGCTGGGCGCCGCCGGTCCGTCGCAAGGCGTGTTACTGGCGGCGCTCTCCCCCGATTTTCGGTTCGCCCGATCGGTGCTCTTGACTGAGTGTCGTCGGTGGCCGATGAGATTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Microcosmus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103522", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Microcosmus_squamiger", "scientificNameID": "urn:lsid:marinespecies.org:taxname:236666", "accession": "FM244855.1.1786_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Microcosmus_exasperatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103838", "accession": "KT387603.1.1766_U", "identity": 0.995, "query_cover": 0.9952 } ] }
organismQuantity	4.0

id	b9644618-5f26-4e7f-b352-6e80ba947e7d
scientificName	Microcosmus
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-08
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGCTGGGCGCCGCCGGTCCGTCGCAAGGCGTGTTACTGGCGGCGCTCTCCCCCGATTTTCGGTTCGCCCGATCGGTGCTCTTGACTGAGTGTCGTCGGTGGCCGATGAGATTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Microcosmus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103522", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Microcosmus_squamiger", "scientificNameID": "urn:lsid:marinespecies.org:taxname:236666", "accession": "FM244855.1.1786_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Microcosmus_exasperatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103838", "accession": "KT387603.1.1766_U", "identity": 0.995, "query_cover": 0.9952 } ] }
organismQuantity	1.0

id	c2f61230-ed2a-4da0-b37e-57e51332acd5
scientificName	Microcosmus
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-04
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGCTGGGCGCCGCCGGTCCGTCGCAAGGCGTGTTACTGGCGGCGCTCTCCCCCGATTTTCGGTTCGCCCGATCGGTGCTCTTGACTGAGTGTCGTCGGTGGCCGATGAGATTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Microcosmus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103522", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Microcosmus_squamiger", "scientificNameID": "urn:lsid:marinespecies.org:taxname:236666", "accession": "FM244855.1.1786_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Microcosmus_exasperatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103838", "accession": "KT387603.1.1766_U", "identity": 0.995, "query_cover": 0.9952 } ] }
organismQuantity	1.0

id	d21273f1-e70a-4c0d-a3fc-50edb6f6b3d6
scientificName	Microcosmus exasperatus
AphiaID	103838
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-09
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGCTGGGCGCCGCCGGTCCGTCGCAAGGCGTGTCACTGGCGGCGCTCTCCCCCGATTTTCGGTTCGCCCGATCGGTGCTCTTGACTGAGTGTCGTCGGTGGCCGATGAGATTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Microcosmus exasperatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103838", "confidence": 0.96 }, { "method": "VSEARCH", "scientificName": "Microcosmus_exasperatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103838", "accession": "KT387603.1.1766_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Microcosmus_squamiger", "scientificNameID": "urn:lsid:marinespecies.org:taxname:236666", "accession": "FM244855.1.1786_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	5315.0

id	35201046-894d-409f-91ab-2a9057b4cc1f
scientificName	Microcosmus exasperatus
AphiaID	103838
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-03
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGCTGGGCGCCGCCGGTCCGTCGCAAGGCGTGTCACTGGCGGCGCTCTCCCCCGATTTTCGGTTCGCCCGATCGGTGCTCTTGACTGAGTGTCGTCGGTGGCCGATGAGATTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Microcosmus exasperatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103838", "confidence": 0.96 }, { "method": "VSEARCH", "scientificName": "Microcosmus_exasperatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103838", "accession": "KT387603.1.1766_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Microcosmus_squamiger", "scientificNameID": "urn:lsid:marinespecies.org:taxname:236666", "accession": "FM244855.1.1786_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	215.0

id	6e72a1b9-7195-4b35-b101-69a98d7acdfa
scientificName	Microcosmus exasperatus
AphiaID	103838
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-01
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGCTGGGCGCCGCCGGTCCGTCGCAAGGCGTGTCACTGGCGGCGCTCTCCCCCGATTTTCGGTTCGCCCGATCGGTGCTCTTGACTGAGTGTCGTCGGTGGCCGATGAGATTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Microcosmus exasperatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103838", "confidence": 0.96 }, { "method": "VSEARCH", "scientificName": "Microcosmus_exasperatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103838", "accession": "KT387603.1.1766_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Microcosmus_squamiger", "scientificNameID": "urn:lsid:marinespecies.org:taxname:236666", "accession": "FM244855.1.1786_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	43.0

id	63f7addf-cad1-4889-abb5-6d7bb271d625
scientificName	Microcosmus exasperatus
AphiaID	103838
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-10
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGCTGGGCGCCGCCGGTCCGTCGCAAGGCGTGTCACTGGCGGCGCTCTCCCCCGATTTTCGGTTCGCCCGATCGGTGCTCTTGACTGAGTGTCGTCGGTGGCCGATGAGATTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Microcosmus exasperatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103838", "confidence": 0.96 }, { "method": "VSEARCH", "scientificName": "Microcosmus_exasperatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103838", "accession": "KT387603.1.1766_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Microcosmus_squamiger", "scientificNameID": "urn:lsid:marinespecies.org:taxname:236666", "accession": "FM244855.1.1786_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	41.0

id	e8bbb248-94da-4270-971f-a2bbf18842b0
scientificName	Microcosmus exasperatus
AphiaID	103838
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-07
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGCTGGGCGCCGCCGGTCCGTCGCAAGGCGTGTCACTGGCGGCGCTCTCCCCCGATTTTCGGTTCGCCCGATCGGTGCTCTTGACTGAGTGTCGTCGGTGGCCGATGAGATTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Microcosmus exasperatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103838", "confidence": 0.96 }, { "method": "VSEARCH", "scientificName": "Microcosmus_exasperatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103838", "accession": "KT387603.1.1766_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Microcosmus_squamiger", "scientificNameID": "urn:lsid:marinespecies.org:taxname:236666", "accession": "FM244855.1.1786_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	12.0

id	07ba721c-cb7f-40c3-8a8f-73ef535800a3
scientificName	Microcosmus exasperatus
AphiaID	103838
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-12
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGCTGGGCGCCGCCGGTCCGTCGCAAGGCGTGTCACTGGCGGCGCTCTCCCCCGATTTTCGGTTCGCCCGATCGGTGCTCTTGACTGAGTGTCGTCGGTGGCCGATGAGATTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Microcosmus exasperatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103838", "confidence": 0.96 }, { "method": "VSEARCH", "scientificName": "Microcosmus_exasperatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103838", "accession": "KT387603.1.1766_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Microcosmus_squamiger", "scientificNameID": "urn:lsid:marinespecies.org:taxname:236666", "accession": "FM244855.1.1786_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	1.0

id	5d1a7b9f-977d-4a57-b367-74aee8a94abc
scientificName	Microcosmus exasperatus
AphiaID	103838
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-13
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGCTGGGCGCCGCCGGTCCGTCGCAAGGCGTGTCACTGGCGGCGCTCTCCCCCGATTTTCGGTTCGCCCGATCGGTGCTCTTGACTGAGTGTCGTCGGTGGCCGATGAGATTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Microcosmus exasperatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103838", "confidence": 0.96 }, { "method": "VSEARCH", "scientificName": "Microcosmus_exasperatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103838", "accession": "KT387603.1.1766_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Microcosmus_squamiger", "scientificNameID": "urn:lsid:marinespecies.org:taxname:236666", "accession": "FM244855.1.1786_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	1.0

id	8088bd8a-069c-4ea7-b23d-1eb314802454
scientificName	Microcosmus exasperatus
AphiaID	103838
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-11
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGCTGGGCGCCGCCGGTCCGTCGCAAGGCGTGTCACTGGCGGCGCTCTCCCCCGATTTTCGGTTCGCCCGATCGGTGCTCTTGACTGAGTGTCGTCGGTGGCCGATGAGATTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Microcosmus exasperatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103838", "confidence": 0.96 }, { "method": "VSEARCH", "scientificName": "Microcosmus_exasperatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103838", "accession": "KT387603.1.1766_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Microcosmus_squamiger", "scientificNameID": "urn:lsid:marinespecies.org:taxname:236666", "accession": "FM244855.1.1786_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	1.0

id	a9ff6a26-0a34-416b-89cb-05d7527416e6
scientificName	Microcosmus exasperatus
AphiaID	103838
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-05
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTTGGCTGGGCGCCGCCGGTCCGTCGCAAGGCGTGTCACTGGCGGCGCTCTCCCCCGATTTTCGGTTCGCCCGATCGGTGCTCTTGACTGAGTGTCGTCGGTGGCCGATGAGATTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Microcosmus exasperatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103838", "confidence": 0.96 }, { "method": "VSEARCH", "scientificName": "Microcosmus_exasperatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103838", "accession": "KT387603.1.1766_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Microcosmus_squamiger", "scientificNameID": "urn:lsid:marinespecies.org:taxname:236666", "accession": "FM244855.1.1786_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	1.0

Microcosmus squamiger in Fiji

Status

Microcosmus squamiger does not have an offial status in Fiji.

Notes

No notes found.