| Occurrences: |
view occurrences
| id |
3876da35-a8c7-4445-a9cd-47575ca6c109
|
| scientificName |
Eutintinnus
|
| eventDate |
2022-06-20
|
| decimalLongitude |
178.425933
|
| decimalLatitude |
-18.1293
|
| materialSampleID |
S41
|
| target_gene |
18S
|
| DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTCTGGCAAGATTCAACGGCGCACCGCGTGCGCCCGCGAGTCCTGCCATCCGTCTGTTAAACCAGCAGGACATTCATTTGTCGGCTGGCGGCTCAGACAATTTACCTTGAGAAAATTAGAGTGTTTCAGGCAGGCTAGCGCC
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Eutintinnus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:183543",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Eutintinnus lusus-undae",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:235772",
"accession": "MK036421.1.1578_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Eutintinnus lususundae",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:247939",
"accession": "JX101858.1.1612_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Eutintinnus lususundae",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:247939",
"accession": "JX101857.1.1612_U",
"identity": 0.995,
"query_cover": 0.9952
}
]
}
|
| organismQuantity |
41.0
|
| id |
087835f5-4830-4319-9f0f-9e5834ed88b5
|
| scientificName |
Eutintinnus
|
| eventDate |
2022-06-20
|
| decimalLongitude |
178.425933
|
| decimalLatitude |
-18.1293
|
| materialSampleID |
S35
|
| target_gene |
18S
|
| DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTCTGGCAAGATTCAACGGCGCACCGCGTGCGCCCGCGAGTCCTGCCATCCGTCTGTTAAACCAGCAGGACATTCATTTGTCGGCTGGCGGCTCAGACAATTTACCTTGAGAAAATTAGAGTGTTTCAGGCAGGCTAGCGCC
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Eutintinnus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:183543",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Eutintinnus lusus-undae",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:235772",
"accession": "MK036421.1.1578_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Eutintinnus lususundae",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:247939",
"accession": "JX101858.1.1612_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Eutintinnus lususundae",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:247939",
"accession": "JX101857.1.1612_U",
"identity": 0.995,
"query_cover": 0.9952
}
]
}
|
| organismQuantity |
11.0
|
| id |
098d8af5-163c-4606-b5ee-5e4240c06509
|
| scientificName |
Eutintinnus
|
| eventDate |
2022-06-20
|
| decimalLongitude |
178.425933
|
| decimalLatitude |
-18.1293
|
| materialSampleID |
S40
|
| target_gene |
18S
|
| DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTCTGGCAAGATTCAACGGCGCACCGCGTGCGCCCGCGAGTCCTGCCATCCGTCTGTTAAACCAGCAGGACATTCATTTGTCGGCTGGCGGCTCAGACAATTTACCTTGAGAAAATTAGAGTGTTTCAGGCAGGCTAGCGCC
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Eutintinnus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:183543",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Eutintinnus lusus-undae",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:235772",
"accession": "MK036421.1.1578_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Eutintinnus lususundae",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:247939",
"accession": "JX101858.1.1612_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Eutintinnus lususundae",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:247939",
"accession": "JX101857.1.1612_U",
"identity": 0.995,
"query_cover": 0.9952
}
]
}
|
| organismQuantity |
2.0
|
|