PacMAN decision support system

Potential detection of Turritopsis dohrnii in Fiji

Description:

Potential detection of Turritopsis dohrnii with confidence medium on 2023-04-27 in material sample USP-24-01-98, marker COI

Confidence:

medium

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Turritopsis dohrnii
Cnidaria > Hydrozoa > Anthoathecata > Oceaniidae
WoRMS: 151801

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

0.997

Reads:

38.0

Names:

Occurrences:

view occurrences

id	9cc53348-ab1f-4da2-a20f-368f1c363206
scientificName	Turritopsis dohrnii
AphiaID	151801
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
eventID	SUVA1_20230427_S2B
materialSampleID	USP-24-01-98
target_gene	COI
DNA_sequence	ATTAGCTGGGCCACAAGCACATTCTGGAGGTTCTGTCGATATGGCTATATTTAGTTTACATTGTGCAGGTGCCTCATCAATAATGGGTGCTATAAACTTTATAACCACTATTTTTAATATGAGAACCCCAGGTATGACCTTTGATAAATTACCTTTGTTTGTATGGTCAGTATTAATAACAGCTTTTCTTTTGTTATTATCTCTACCTGTATTGGCAGGTGCTATAACCATGCTATTAACAGATAGGAATTTCAATACTACTTTTTTTGACCCAGCAGGAGGGGGAGATCCTATACTTTACCAACACTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Turritopsis dohrnii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:151801", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Turritopsis dohrnii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:151801", "accession": "KX096596", "identity": 0.997, "query_cover": 0.9968 } ] }
organismQuantity	38.0

id	e73b00d0-ebf0-4f1c-b8ee-f3c8778d4c87
scientificName	Turritopsis dohrnii
AphiaID	151801
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
eventID	SUVA1_20230427_S3C
materialSampleID	USP-24-01-102
target_gene	COI
DNA_sequence	ATTAGCTGGGCCACAAGCACATTCTGGAGGTTCTGTCGATATGGCTATATTTAGTTTACATTGTGCAGGTGCCTCATCAATAATGGGTGCTATAAACTTTATAACCACTATTTTTAATATGAGAACCCCAGGTATGACCTTTGATAAATTACCTTTGTTTGTATGGTCAGTATTAATAACAGCTTTTCTTTTGTTATTATCTCTACCTGTATTGGCAGGTGCTATAACCATGCTATTAACAGATAGGAATTTCAATACTACTTTTTTTGACCCAGCAGGAGGGGGAGATCCTATACTTTACCAACACTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Turritopsis dohrnii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:151801", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Turritopsis dohrnii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:151801", "accession": "KX096596", "identity": 0.997, "query_cover": 0.9968 } ] }
organismQuantity	7.0

id	08941954-4cdd-4a64-a30f-a8f752461ff2
scientificName	Turritopsis dohrnii
AphiaID	151801
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
eventID	SUVA1_20230427_S2A
materialSampleID	USP-24-01-97
target_gene	COI
DNA_sequence	ATTAGCTGGGCCACAAGCACATTCTGGAGGTTCTGTCGATATGGCTATATTTAGTTTACATTGTGCAGGTGCCTCATCAATAATGGGTGCTATAAACTTCATAACCACTATTTTTAATATGAGAGCCCCAGGTATGACTTTTGATAAATTACCTTTGTTTGTGTGGTCAGTATTAATAACAGCTTTTCTTTTGTTATTATCTCTACCTGTATTGGCAGGTGCTATAACCATGCTATTAACAGATAGGAATTTCAATACTACTTTTTTTGACCCAGCAGGAGGGGGAGATCCTATACTTTACCAACACTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Turritopsis dohrnii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:151801", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Turritopsis dohrnii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:151801", "accession": "KX096596", "identity": 0.99, "query_cover": 0.9968 } ] }
organismQuantity	1.0

id	16013526-91a4-497f-b4f8-5271eceaa271
scientificName	Turritopsis dohrnii
AphiaID	151801
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
eventID	SUVA1_20230427_S2A
materialSampleID	USP-24-01-97
target_gene	COI
DNA_sequence	ATTAGCTGGGCCACAAGCACATTCTGGAGGTTCTGTCGATATGGCTATATTTAGTTTACATTGTGCAGGTGCCTCATCAATAATGGGTGCTATAAACTTCATAACCACTATTTTTAATATGAGAGCCCCAGGTATGACTTTTGATAAATTACCTTTGTTTGTGTGGTCAGTATTAATAACAGCTTTTCTTTTGTTATTATCTCTACCTGTATTGGCAGGTGCTATAACCATGCTATTAACAGATAGGAATTTCAATACTACTTTTTTTGATCCAGCAGGAGGGGGAGATCCTATACTTTACCAACACTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Turritopsis dohrnii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:151801", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Turritopsis dohrnii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:151801", "accession": "KX096596", "identity": 0.987, "query_cover": 0.9968 } ] }
organismQuantity	49.0

id	abc9cedd-343f-45eb-8848-60a49ae8e171
scientificName	Turritopsis dohrnii
AphiaID	151801
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
eventID	SUVA1_20230427_S3A
materialSampleID	USP-24-01-100
target_gene	COI
DNA_sequence	ATTAGCTGGGCCACAAGCACATTCTGGAGGTTCTGTCGATATGGCTATATTTAGTTTACATTGTGCAGGTGCCTCATCAATAATGGGTGCTATAAACTTCATAACCACTATTTTTAATATGAGAGCCCCAGGTATGACTTTTGATAAATTACCTTTGTTTGTGTGGTCAGTATTAATAACAGCTTTTCTTTTGTTATTATCTCTACCTGTATTGGCAGGTGCTATAACCATGCTATTAACAGATAGGAATTTCAATACTACTTTTTTTGATCCAGCAGGAGGGGGAGATCCTATACTTTACCAACACTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Turritopsis dohrnii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:151801", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Turritopsis dohrnii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:151801", "accession": "KX096596", "identity": 0.987, "query_cover": 0.9968 } ] }
organismQuantity	4.0

id	5751fe74-bdb1-4d83-ac41-536272ba6892
scientificName	Turritopsis dohrnii
AphiaID	151801
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
eventID	SUVA2_20230427_WA
materialSampleID	USP-24-01-108
target_gene	COI
DNA_sequence	ATTAGCTGGGCCACAAGCACATTCTGGAGGTTCTGTCGATATGGCTATATTTAGTTTACATTGTGCAGGTGCCTCATCAATAATGGGTGCTATAAACTTTATAACTACTATTTTTAATATGAGAGCCCCAGGTATGACTTTTGATAAATTACCTTTGTTTGTGTGGTCAGTATTAATAACAGCTTTTCTTTTGTTATTATCTCTACCTGTATTGGCAGGTGCTATAACCATGCTATTAACAGATAGGAATTTCAATACTACTTTTTTTGATCCAGCAGGAGGGGGAGATCCTATACTTTACCAACACTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Turritopsis dohrnii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:151801", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Turritopsis dohrnii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:151801", "accession": "KX096596", "identity": 0.987, "query_cover": 0.9968 } ] }
organismQuantity	1.0

Turritopsis dohrnii does not have an offial status in Fiji.

No notes found.