PacMAN decision support system

Potential detection of Callopora lineata in Fiji

Description:

Potential detection of Callopora lineata with confidence low on 2022-05-25 in material sample S46, marker 18S

Confidence:

low

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Callopora lineata
Bryozoa > Gymnolaemata > Cheilostomatida > Calloporidae
WoRMS: 111197

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

1.0

Reads:

43.0

Names:

Occurrences:

view occurrences

id	1aa3469c-0700-4cd4-8946-dcf02d0f746f
scientificName	Callopora lineata
AphiaID	111197
eventDate	2022-05-25
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S46
target_gene	18S
DNA_sequence	GTTGGTTAGAGAGTCGGCGAGCCAATGATTAACAGGGACTGCCGGGGGCATTAGTACTCGGACGGGAGAGGTGAAATTCAAGGATCGTCCGAAGACTCCCTACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAACGAAAGTCAGAGGTGCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Callopora lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "confidence": 0.95 }, { "method": "VSEARCH", "scientificName": "Bugula_turrita", "scientificNameID": "urn:lsid:marinespecies.org:taxname:159783", "accession": "AY210443.1.1841_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Callopora_dumerilii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111196", "accession": "FJ152025.1.2143_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Bugula_plumosa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111159", "accession": "JN680951.1.1836_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Callopora_lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "accession": "JN680949.1.1836_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Bugula_fulva", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111153", "accession": "FJ152023.1.2123_U", "identity": 0.994, "query_cover": 0.9938 } ] }
organismQuantity	43.0

id	22f40ffe-0ce8-48ac-8749-bddd4e712dc5
scientificName	Callopora lineata
AphiaID	111197
eventDate	2022-05-25
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S47
target_gene	18S
DNA_sequence	GTTGGTTAGAGAGTCGGCGAGCCAATGATTAACAGGGACTGCCGGGGGCATTAGTACTCGGACGGGAGAGGTGAAATTCAAGGATCGTCCGAAGACTCCCTACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAACGAAAGTCAGAGGTGCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Callopora lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "confidence": 0.95 }, { "method": "VSEARCH", "scientificName": "Bugula_turrita", "scientificNameID": "urn:lsid:marinespecies.org:taxname:159783", "accession": "AY210443.1.1841_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Callopora_dumerilii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111196", "accession": "FJ152025.1.2143_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Bugula_plumosa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111159", "accession": "JN680951.1.1836_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Callopora_lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "accession": "JN680949.1.1836_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Bugula_fulva", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111153", "accession": "FJ152023.1.2123_U", "identity": 0.994, "query_cover": 0.9938 } ] }
organismQuantity	7.0

id	cf63e643-caa2-42cc-b89b-905b9a225403
scientificName	Callopora lineata
AphiaID	111197
eventDate	2022-05-25
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S45
target_gene	18S
DNA_sequence	GTTGGTTAGAGAGTCGGCGAGCCAATGATTAACAGGGACTGCCGGGGGCATTAGTACTCGGACGGGAGAGGTGAAATTCAAGGATCGTCCGAAGACTCCCTACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAACGAAAGTCAGAGGTGCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Callopora lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "confidence": 0.95 }, { "method": "VSEARCH", "scientificName": "Bugula_turrita", "scientificNameID": "urn:lsid:marinespecies.org:taxname:159783", "accession": "AY210443.1.1841_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Callopora_dumerilii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111196", "accession": "FJ152025.1.2143_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Bugula_plumosa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111159", "accession": "JN680951.1.1836_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Callopora_lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "accession": "JN680949.1.1836_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Bugula_fulva", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111153", "accession": "FJ152023.1.2123_U", "identity": 0.994, "query_cover": 0.9938 } ] }
organismQuantity	7.0

id	797e0679-734d-4cf4-be6f-cbfeeab5c2ed
scientificName	Callopora lineata
AphiaID	111197
eventDate	2022-05-25
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S48
target_gene	18S
DNA_sequence	GTTGGTTAGAGAGTCGGCGAGCCAATGATTAACAGGGACTGCCGGGGGCATTAGTACTCGGACGGGAGAGGTGAAATTCAAGGATCGTCCGAAGACTCCCTACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAACGAAAGTCAGAGGTGCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Callopora lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "confidence": 0.95 }, { "method": "VSEARCH", "scientificName": "Bugula_turrita", "scientificNameID": "urn:lsid:marinespecies.org:taxname:159783", "accession": "AY210443.1.1841_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Callopora_dumerilii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111196", "accession": "FJ152025.1.2143_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Bugula_plumosa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111159", "accession": "JN680951.1.1836_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Callopora_lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "accession": "JN680949.1.1836_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Bugula_fulva", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111153", "accession": "FJ152023.1.2123_U", "identity": 0.994, "query_cover": 0.9938 } ] }
organismQuantity	4.0

id	74dc1ba0-5116-443f-bed4-5d1acd9379c7
scientificName	Callopora lineata
AphiaID	111197
eventDate	2022-05-25
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S48
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAGCAGCGTATATTTATATTGCTGCGTTTAAAAAGCTCGTAGTTGAAGCGTCAGACGCGGGAGGGCGGACGGCCGCACTGGTCGCTCACGCCCGACCGAGCCAGGCGCAGAGGGCGCGCGTCGCTTGCACTTCACCGTGTGAGCGCGCCGCCGCTGCACGTTCACCTTGAAGAAATTGAACCGCTTAGAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Callopora lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "confidence": 0.9 }, { "method": "VSEARCH", "scientificName": "Callopora_dumerilii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111196", "accession": "FJ152025.1.2143_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Callopora_lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "accession": "JN680949.1.1836_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Callopora_lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "accession": "FJ152026.1.1903_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bryozoa_XXX_sp.", "accession": "FJ153752.1.1820_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bryozoa_XXX_sp.", "accession": "FJ486006.1.831_U", "identity": 0.995, "query_cover": 0.9952 } ] }
organismQuantity	1.0

id	09296c7e-36d4-48fb-a965-e6324efb0cf2
scientificName	Callopora lineata
AphiaID	111197
eventDate	2022-05-25
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S63
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAGCAGCGTATATTTATATTGCTGCGTTTAAAAAGCTCGTAGTTGAAGCGTCAGACGCGGGAGGGCGGACGGCCGCACTGGTCGCTCTCGCCCGACCGAGCCAGGCGCAGAGGGCGCGCGTCGCTTGCACTTTGCCGTGTGAGCGCGCCGCCGCTGCACGTTCACCTTGAAGAAATTGAACCGCTTAGAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Callopora lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "confidence": 0.81 }, { "method": "VSEARCH", "scientificName": "Cryptosula_pallasiana", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111343", "accession": "FJ196129.1.1578_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Cryptosula_pallasiana", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111343", "accession": "JN680940.1.1832_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bugula_turrita", "scientificNameID": "urn:lsid:marinespecies.org:taxname:159783", "accession": "AY210443.1.1841_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bugula_fulva", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111153", "accession": "FJ152023.1.2123_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Callopora_dumerilii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111196", "accession": "FJ152025.1.2143_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	5.0

Callopora lineata in Fiji

Status

Callopora lineata does not have an offial status in Fiji.

Notes

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