PacMAN decision support system

Potential detection of Euterpina acutifrons in Fiji

Description:

Potential detection of Euterpina acutifrons with confidence low on 2022-02-01 in material sample S1, marker 18S

Confidence:

low

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Euterpina acutifrons
Arthropoda > Copepoda > Harpacticoida > Tachidiidae
WoRMS: 116162

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

Reads:

15.0

Names:

Occurrences:

view occurrences

id	cf719927-e581-4eae-b4bc-a6b97dc857a3
scientificName	Euterpina acutifrons
AphiaID	116162
eventDate	2022-02-01
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S1
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAATGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTCAACACGTCGCGGGCGGTTCGTTATTCGACGTTACTGCCCCGTCGATGTGTGTGTTTTGACAGAGGCTTCGGGGTGATCTTAATCGATTGTCTCGTAGTGCTGTCAGGTTTACTTTGAAAAAATTAGAGTGCTCAAAGCA
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Euterpina acutifrons", "scientificNameID": "urn:lsid:marinespecies.org:taxname:116162", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Euterpina acutifrons", "scientificNameID": "urn:lsid:marinespecies.org:taxname:116162", "accession": "AY446896.1.873_U", "identity": 0.976, "query_cover": 0.9952 } ] }
organismQuantity	15.0

id	d44c1a03-1acd-46c6-b396-0f8461a72009
scientificName	Euterpina acutifrons
AphiaID	116162
eventDate	2022-02-01
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S11
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAATGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTCAACACGTCGCGGGCGGTTCGTTATTCGACGTTACTGCCCCGTCGATGTGTGTGTTTTGACAGAGGCTTCGGGGTGATCTTAATCGATTGTCTCGTAGTGCTGTCAGGTTTACTTTGAAAAAATTAGAGTGCTCAAAGCA
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Euterpina acutifrons", "scientificNameID": "urn:lsid:marinespecies.org:taxname:116162", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Euterpina acutifrons", "scientificNameID": "urn:lsid:marinespecies.org:taxname:116162", "accession": "AY446896.1.873_U", "identity": 0.976, "query_cover": 0.9952 } ] }
organismQuantity	8.0

id	60b9fbc3-9a50-4bf1-a540-88487efae24a
scientificName	Euterpina acutifrons
AphiaID	116162
eventDate	2022-02-01
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S7
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAATGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTCAACACGTCGCGGGCGGTTCGTTATTCGACGTTACTGCCCCGTCGATGTGTGTGTTTTGACAGAGGCTTCGGGGTGATCTTAATCGATTGTCTCGTAGTGCTGTCAGGTTTACTTTGAAAAAATTAGAGTGCTCAAAGCA
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Euterpina acutifrons", "scientificNameID": "urn:lsid:marinespecies.org:taxname:116162", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Euterpina acutifrons", "scientificNameID": "urn:lsid:marinespecies.org:taxname:116162", "accession": "AY446896.1.873_U", "identity": 0.976, "query_cover": 0.9952 } ] }
organismQuantity	7.0

id	09c20c12-c5c5-4a2e-9655-42c0d7c4df40
scientificName	Euterpina acutifrons
AphiaID	116162
eventDate	2022-02-01
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S42
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAATGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTCAACACGTCGCGGGCGGTTCGTTATTCGACGTTACTGCCCCGTCGATGTGTGTGTTTTGACAGAGGCTTCGGGGTGATCTTAATCGATTGTCTCGTAGTGCTGTCAGGTTTACTTTGAAAAAATTAGAGTGCTCAAAGCA
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Euterpina acutifrons", "scientificNameID": "urn:lsid:marinespecies.org:taxname:116162", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Euterpina acutifrons", "scientificNameID": "urn:lsid:marinespecies.org:taxname:116162", "accession": "AY446896.1.873_U", "identity": 0.976, "query_cover": 0.9952 } ] }
organismQuantity	5.0

id	78c250e4-fdbc-4cff-8bb9-43551a45eb30
scientificName	Euterpina acutifrons
AphiaID	116162
eventDate	2022-02-01
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S2
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAATGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTCAACACGTCGCGGGCGGTTCGTTATTCGACGTTACTGCCCCGTCGATGTGTGTGTTTTGACAGAGGCTTCGGGGTGATCTTAATCGATTGTCTCGTAGTGCTGTCAGGTTTACTTTGAAAAAATTAGAGTGCTCAAAGCA
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Euterpina acutifrons", "scientificNameID": "urn:lsid:marinespecies.org:taxname:116162", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Euterpina acutifrons", "scientificNameID": "urn:lsid:marinespecies.org:taxname:116162", "accession": "AY446896.1.873_U", "identity": 0.976, "query_cover": 0.9952 } ] }
organismQuantity	4.0

Euterpina acutifrons does not have an offial status in Fiji.

No notes found.