PacMAN decision support system

Potential detection of Xenostrobus securis in Fiji

Description:

Potential detection of Xenostrobus securis with confidence medium on 2022-11-23 in material sample S72, marker 18S

Confidence:

medium

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Xenostrobus securis
Mollusca > Bivalvia > Mytilida > Mytilidae
WoRMS: 140485

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

1.0

Reads:

106.0

Names:

1

Occurrences:

view occurrences

id	0a3450ed-3470-4e51-bc7e-882c5735b0a8
scientificName	Xenostrobus securis
AphiaID	140485
eventDate	2022-11-23
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S72
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGTCCAGGCTGGCGGTCCGGCGCATGCCGGTTACTGCTTGTCCTGACCTACCTCCCGGTCGCGCCCTTGGTGCTCTTGATTGAGTGTCTCGGGTCGCCGGAACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "EF186010.1.874_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949127.1.1708_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "EF186014.1.874_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "EF186008.1.874_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "DQ984672.1.877_U", "identity": 1, "query_cover": 0.9952 } ] }
organismQuantity	106.0

id	8d6415fa-99a1-403c-b17c-e19a616fb4a7
scientificName	Mytiloides
eventDate	2022-11-23
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S72
target_gene	18S
DNA_sequence	TGCTGGTTTTCGGAGCTCGAGGTAATGATTAAGAGGGACTGACGGGGGCATTCGTATTACGGTGTTAGAGGTGAAATTCTTGGATCGCCGTAAGACGAACCGCTGCGAAAGCGTTTGCCAAGAATGTTTTCATTAGTCAAGAACGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Mytiloida", "scientificNameID": "urn:lsid:marinespecies.org:taxname:1506984", "confidence": 0.88 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949127.1.1708_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949125.1.1657_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949134.1.1652_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949124.1.1657_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949130.1.1680_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	97.0

id	c782e058-3e66-4332-9c48-fab7b3a75157
scientificName	Xenostrobus securis
AphiaID	140485
eventDate	2022-11-23
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S70
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGTCCAGGCTGGCGGTCCGGCGCATGCCGGTTACTGCTTGTCCTGACCTACCTCCCGGTCGCGCCCTTGGTGCTCTTGATTGAGTGTCTCGGGTCGCCGGAACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "EF186010.1.874_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949127.1.1708_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "EF186014.1.874_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "EF186008.1.874_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "DQ984672.1.877_U", "identity": 1, "query_cover": 0.9952 } ] }
organismQuantity	52.0

id	2b5bc61a-63d6-492a-b464-8376c85e69b9
scientificName	Mytiloides
eventDate	2022-11-23
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S70
target_gene	18S
DNA_sequence	TGCTGGTTTTCGGAGCTCGAGGTAATGATTAAGAGGGACTGACGGGGGCATTCGTATTACGGTGTTAGAGGTGAAATTCTTGGATCGCCGTAAGACGAACCGCTGCGAAAGCGTTTGCCAAGAATGTTTTCATTAGTCAAGAACGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Mytiloida", "scientificNameID": "urn:lsid:marinespecies.org:taxname:1506984", "confidence": 0.88 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949127.1.1708_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949125.1.1657_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949134.1.1652_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949124.1.1657_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949130.1.1680_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	48.0

id	4d7a84d3-b8d4-46fa-8d28-a315d7b86257
scientificName	Mytiloides
eventDate	2022-11-23
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S73
target_gene	18S
DNA_sequence	TGCTGGTTTTCGGAGCTCGAGGTAATGATTAAGAGGGACTGACGGGGGCATTCGTATTACGGTGTTAGAGGTGAAATTCTTGGATCGCCGTAAGACGAACCGCTGCGAAAGCGTTTGCCAAGAATGTTTTCATTAGTCAAGAACGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Mytiloida", "scientificNameID": "urn:lsid:marinespecies.org:taxname:1506984", "confidence": 0.88 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949127.1.1708_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949125.1.1657_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949134.1.1652_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949124.1.1657_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949130.1.1680_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	3.0

id	ddf7b105-d5c1-4c3d-b724-0162de6c6a40
scientificName	Xenostrobus securis
AphiaID	140485
eventDate	2022-11-23
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S73
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGTCCAGGCTGGCGGTCCGGCGCATGCCGGTTACTGCTTGTCCTGACCTACCTCCCGGTCGCGCCCTTGGTGCTCTTGATTGAGTGTCTCGGGTCGCCGGAACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "EF186010.1.874_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949127.1.1708_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "EF186014.1.874_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "EF186008.1.874_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "DQ984672.1.877_U", "identity": 1, "query_cover": 0.9952 } ] }
organismQuantity	3.0

Xenostrobus securis in Fiji

Status

Xenostrobus securis does not have an offial status in Fiji.

Notes

No notes found.