PacMAN decision support system

Potential detection of Dendostrea sandvichensis in Fiji

Description:

Potential detection of Dendostrea sandvichensis with confidence low on 2022-02-16 in material sample S111, marker COI

Confidence:

low

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Dendostrea sandvichensis
Mollusca > Bivalvia > Ostreida > Ostreidae
WoRMS: 506713

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

Reads:

6.0

Names:

Occurrences:

view occurrences

id	dcbbb713-2e32-42d0-81a8-22071f8711fe
scientificName	Dendostrea sandvichensis
AphiaID	506713
eventDate	2022-02-16
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S111
target_gene	COI
DNA_sequence	TTTATCTACTTTCTCATATCATGGAATGTGCATGGACTTGGCTATTTTGAGACTTCACTTAGCTGGTATTAGATCAATTTTTAGGTCAATTAACTTTATGGTGACAATTACTAATATACGATCAGTAGATGGCCATTTATTGGCTTTGTTTCCTTGATCTATTAAAGTGACTTCATTTTTATTACTTACCACTCTTCCAGTATTGGCTGGTGGGTTGACTATGTTACTGACGGACCGACATTTTAATACTTCTTTCTTCGATCCGGTAGGAGGTGGTGATCCGGTCTTATTCCAGCATTTATTC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Dendostrea crenulifera", "scientificNameID": "urn:lsid:marinespecies.org:taxname:244714", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Dendostrea crenulifera", "scientificNameID": "urn:lsid:marinespecies.org:taxname:244714", "accession": "KC683510", "identity": 0.977, "query_cover": 0.9967 }, { "method": "VSEARCH", "scientificName": "Dendostrea crenulifera", "scientificNameID": "urn:lsid:marinespecies.org:taxname:244714", "accession": "KC683511", "identity": 0.977, "query_cover": 0.9967 } ] }
organismQuantity	6.0

id	0a4140c4-1021-441d-bbc2-ef6fa9e24b37
scientificName	Dendostrea sandvichensis
AphiaID	506713
eventDate	2022-02-16
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S112
target_gene	COI
DNA_sequence	TTTGTCTACTTTCTCATATCACGGAATGTGCATGGATTTGGCCATTTTAAGACTTCATTTAGCCGGAATTAGATCAATTTTTAGGTCAATTAACTTTGTAGTAACAATTACTAATATACGGTCAGTAGATGGCCACTTGTTAGCTTTATTTCCTTGGTCTATTAAAGTGACTTCATTTTTATTACTTACCACTCTTCCAGTCTTAGCTGGTGGGTTAACTATGTTACTGACAGATCGACATTTTAACACTTCTTTCTTTGACCCAGTAGGGGGTGGTGATCCGGTTTTATTCCAGCATTTATTC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Dendostrea crenulifera", "scientificNameID": "urn:lsid:marinespecies.org:taxname:244714", "confidence": 0.81 } ] }
organismQuantity	5.0

id	dd6a8e39-82af-4276-9365-3dd2caea3da0
scientificName	Dendostrea sandvichensis
AphiaID	506713
eventDate	2022-02-16
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S111
target_gene	COI
DNA_sequence	TTTATCTACTTTCTCATATCATGGAATGTGCATGGACTTGGCTATTTTGAGACTTCACTTAGCTGGTATTAGATCAATTTTTAGGTCAATTAACTTTATGGTGACAATTACTAATATACGATCAGTAGATGGCCATTTATTGGCTTTGTTTCCTTGATCTATTAAAGTGACTTCATTTTTATTACTTACCACTCTTCCAGTATTGGCTGGTGGGTTGACTATGTTACTGACGGACCGACATTTTAATACTTCTTTCTTCGATCCGGTAGGAGGTGGTGATCCGGTCTTATTTCAGCATTTATTC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Dendostrea crenulifera", "scientificNameID": "urn:lsid:marinespecies.org:taxname:244714", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Dendostrea crenulifera", "scientificNameID": "urn:lsid:marinespecies.org:taxname:244714", "accession": "KC683510", "identity": 0.98, "query_cover": 0.9967 }, { "method": "VSEARCH", "scientificName": "Dendostrea crenulifera", "scientificNameID": "urn:lsid:marinespecies.org:taxname:244714", "accession": "KC683511", "identity": 0.98, "query_cover": 0.9967 } ] }
organismQuantity	5.0

id	f33f1066-93e3-4237-b246-fd2f4fa93858
scientificName	Dendostrea sandvichensis
AphiaID	506713
eventDate	2022-02-16
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S133
target_gene	COI
DNA_sequence	TTTGTCTACTTTCTCATATCACGGAATGTGCATGGATTTGGCCATTTTAAGACTTCATTTAGCCGGAATTAGATCAATTTTTAGGTCAATTAACTTTGTAGTAACAATTACTAATATACGGTCAGTAGATGGCCACTTGTTAGCTTTATTTCCTTGGTCTATTAAAGTGACTTCATTTTTATTACTTACCACTCTTCCAGTCTTAGCTGGTGGGTTAACTATGTTACTGACAGATCGACATTTTAACACTTCTTTCTTTGACCCAGTAGGGGGTGGTGATCCGGTTTTATTCCAGCATTTATTC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Dendostrea crenulifera", "scientificNameID": "urn:lsid:marinespecies.org:taxname:244714", "confidence": 0.81 } ] }
organismQuantity	3.0

id	5988f791-b1ff-443b-9017-504f3e2bb94f
scientificName	Dendostrea sandvichensis
AphiaID	506713
eventDate	2022-02-16
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S111
target_gene	COI
DNA_sequence	TTTATCTACTTTCTCATATCATGGAATGTGCATGGACTTGGCTATTTTGAGACTTCACTTAGCTGGTATTAGATCAATTTTTAGGTCAATTAACTTTATGGTGACAATTACTAATATACGATCAGTAGATGGCCATTTATTGGCTTTGTTTCCTTGATCTATTAAAGTGACTTCATTTTTATTACTTACCACTCTTCCAGTATTGGCTGGTGGGTTGACTATGTTACTGACGGACCGACATTTTAATACTTCTTTTTTCGATCCGGTAGGAGGTGGTGATCCGGTCTTATTTCAGCATTTATTC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Dendostrea crenulifera", "scientificNameID": "urn:lsid:marinespecies.org:taxname:244714", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Dendostrea crenulifera", "scientificNameID": "urn:lsid:marinespecies.org:taxname:244714", "accession": "KC683510", "identity": 0.977, "query_cover": 0.9967 }, { "method": "VSEARCH", "scientificName": "Dendostrea crenulifera", "scientificNameID": "urn:lsid:marinespecies.org:taxname:244714", "accession": "KC683511", "identity": 0.977, "query_cover": 0.9967 } ] }
organismQuantity	1.0

Dendostrea sandvichensis does not have an offial status in Fiji.

No notes found.