PacMAN decision support system

Potential detection of Boccardiella ligerica in Fiji

Description:

Potential detection of Boccardiella ligerica with confidence low on 2022-02-01 in material sample S7, marker 18S

Confidence:

low

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Boccardiella ligerica
Annelida > Polychaeta > Spionida > Spionidae
WoRMS: 131114

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

0.994

Reads:

59.0

Names:

Occurrences:

view occurrences

id	0a92b0d3-c75e-410b-afca-df4a677bc78a
scientificName	Boccardia proboscidea
AphiaID	327249
eventDate	2022-02-01
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S7
target_gene	18S
DNA_sequence	GTTGGTTTTCGGAAGTCGAGGTAATGATTAGTAGGGACGATCCGGGGGCATTCGTATTGCGCGGTTAGAGGTGAAATTCTTGGATCCGCGCAAGACGAACTACAGCGAAGGCGTTTGCCAAGTGCGTCTTCATTAATCAAGAGCGACAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Boccardia proboscidea", "scientificNameID": "urn:lsid:marinespecies.org:taxname:327249", "confidence": 0.88 }, { "method": "VSEARCH", "scientificName": "Polydora_ciliata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131141", "accession": "U50971.1.1684_U", "identity": 0.994, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Boccardiella_ligerica", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131114", "accession": "AY527061.1.1827_U", "identity": 0.994, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Boccardia_proboscidea", "scientificNameID": "urn:lsid:marinespecies.org:taxname:327249", "accession": "KJ546254.1.1763_U", "identity": 0.994, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Boccardia_proboscidea", "scientificNameID": "urn:lsid:marinespecies.org:taxname:327249", "accession": "KJ546255.1.1763_U", "identity": 0.994, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Boccardia_proboscidea", "scientificNameID": "urn:lsid:marinespecies.org:taxname:327249", "accession": "KJ546256.1.1763_U", "identity": 0.994, "query_cover": 0.9938 } ] }
organismQuantity	59.0

id	0adc6567-47e1-4d4a-8f7b-31d30c67c6c3
scientificName	Boccardia proboscidea
AphiaID	327249
eventDate	2022-02-01
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S2
target_gene	18S
DNA_sequence	GTTGGTTTTCGGAAGTCGAGGTAATGATTAGTAGGGACGATCCGGGGGCATTCGTATTGCGCGGTTAGAGGTGAAATTCTTGGATCCGCGCAAGACGAACTACAGCGAAGGCGTTTGCCAAGTGCGTCTTCATTAATCAAGAGCGACAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Boccardia proboscidea", "scientificNameID": "urn:lsid:marinespecies.org:taxname:327249", "confidence": 0.88 }, { "method": "VSEARCH", "scientificName": "Polydora_ciliata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131141", "accession": "U50971.1.1684_U", "identity": 0.994, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Boccardiella_ligerica", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131114", "accession": "AY527061.1.1827_U", "identity": 0.994, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Boccardia_proboscidea", "scientificNameID": "urn:lsid:marinespecies.org:taxname:327249", "accession": "KJ546254.1.1763_U", "identity": 0.994, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Boccardia_proboscidea", "scientificNameID": "urn:lsid:marinespecies.org:taxname:327249", "accession": "KJ546255.1.1763_U", "identity": 0.994, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Boccardia_proboscidea", "scientificNameID": "urn:lsid:marinespecies.org:taxname:327249", "accession": "KJ546256.1.1763_U", "identity": 0.994, "query_cover": 0.9938 } ] }
organismQuantity	16.0

id	20a05cc2-6ecb-4e0e-ac3e-9625f0bd67aa
scientificName	Boccardia proboscidea
AphiaID	327249
eventDate	2022-02-01
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S20
target_gene	18S
DNA_sequence	GTTGGTTTTCGGAAGTCGAGGTAATGATTAGTAGGGACGATCCGGGGGCATTCGTATTGCGCGGTTAGAGGTGAAATTCTTGGATCCGCGCAAGACGAACTACAGCGAAGGCGTTTGCCAAGTGCGTCTTCATTAATCAAGAGCGACAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Boccardia proboscidea", "scientificNameID": "urn:lsid:marinespecies.org:taxname:327249", "confidence": 0.88 }, { "method": "VSEARCH", "scientificName": "Polydora_ciliata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131141", "accession": "U50971.1.1684_U", "identity": 0.994, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Boccardiella_ligerica", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131114", "accession": "AY527061.1.1827_U", "identity": 0.994, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Boccardia_proboscidea", "scientificNameID": "urn:lsid:marinespecies.org:taxname:327249", "accession": "KJ546254.1.1763_U", "identity": 0.994, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Boccardia_proboscidea", "scientificNameID": "urn:lsid:marinespecies.org:taxname:327249", "accession": "KJ546255.1.1763_U", "identity": 0.994, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Boccardia_proboscidea", "scientificNameID": "urn:lsid:marinespecies.org:taxname:327249", "accession": "KJ546256.1.1763_U", "identity": 0.994, "query_cover": 0.9938 } ] }
organismQuantity	2.0

id	2e493096-a395-41f9-a403-1e73f558fed9
scientificName	Boccardia proboscidea
AphiaID	327249
eventDate	2022-02-01
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S42
target_gene	18S
DNA_sequence	GTTGGTTTTCGGAAGTCGAGGTAATGATTAGTAGGGACGATCCGGGGGCATTCGTATTGCGCGGTTAGAGGTGAAATTCTTGGATCCGCGCAAGACGAACTACAGCGAAGGCGTTTGCCAAGTGCGTCTTCATTAATCAAGAGCGACAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Boccardia proboscidea", "scientificNameID": "urn:lsid:marinespecies.org:taxname:327249", "confidence": 0.88 }, { "method": "VSEARCH", "scientificName": "Polydora_ciliata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131141", "accession": "U50971.1.1684_U", "identity": 0.994, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Boccardiella_ligerica", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131114", "accession": "AY527061.1.1827_U", "identity": 0.994, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Boccardia_proboscidea", "scientificNameID": "urn:lsid:marinespecies.org:taxname:327249", "accession": "KJ546254.1.1763_U", "identity": 0.994, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Boccardia_proboscidea", "scientificNameID": "urn:lsid:marinespecies.org:taxname:327249", "accession": "KJ546255.1.1763_U", "identity": 0.994, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Boccardia_proboscidea", "scientificNameID": "urn:lsid:marinespecies.org:taxname:327249", "accession": "KJ546256.1.1763_U", "identity": 0.994, "query_cover": 0.9938 } ] }
organismQuantity	2.0

id	b62be228-1b7c-4c00-a326-57a090eae7f1
scientificName	Boccardia proboscidea
AphiaID	327249
eventDate	2022-02-01
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S17
target_gene	18S
DNA_sequence	GTTGGTTTTCGGAAGTCGAGGTAATGATTAGTAGGGACGATCCGGGGGCATTCGTATTGCGCGGTTAGAGGTGAAATTCTTGGATCCGCGCAAGACGAACTACAGCGAAGGCGTTTGCCAAGTGCGTCTTCATTAATCAAGAGCGACAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Boccardia proboscidea", "scientificNameID": "urn:lsid:marinespecies.org:taxname:327249", "confidence": 0.88 }, { "method": "VSEARCH", "scientificName": "Polydora_ciliata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131141", "accession": "U50971.1.1684_U", "identity": 0.994, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Boccardiella_ligerica", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131114", "accession": "AY527061.1.1827_U", "identity": 0.994, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Boccardia_proboscidea", "scientificNameID": "urn:lsid:marinespecies.org:taxname:327249", "accession": "KJ546254.1.1763_U", "identity": 0.994, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Boccardia_proboscidea", "scientificNameID": "urn:lsid:marinespecies.org:taxname:327249", "accession": "KJ546255.1.1763_U", "identity": 0.994, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Boccardia_proboscidea", "scientificNameID": "urn:lsid:marinespecies.org:taxname:327249", "accession": "KJ546256.1.1763_U", "identity": 0.994, "query_cover": 0.9938 } ] }
organismQuantity	1.0

Boccardiella ligerica in Fiji

Status

Boccardiella ligerica does not have an offial status in Fiji.

Notes

Add a note

No notes found.