Occurrences: |
view occurrences
id |
948690b2-332b-42af-9b13-942b9dd66ade
|
scientificName |
Dendostrea frons
|
AphiaID |
420779
|
eventDate |
2022-02-16
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
S133
|
target_gene |
COI
|
DNA_sequence |
TTTGTCTACTTTTTCATACCATGGTATGTGTATAGACTTGGCTATTTTAAGGCTTCACTTAGCAGGTATTAGTTCAATCTTCAGGTCAATTAACTTTATGGTTACAATTACTAACATGCGATCAGTAGATGGCCATTTGTTAGCCTTGTTTCCTTGATCAATTAAAGTTACTTCTTTTCTGTTACTTACTACTTTGCCTGTGTTAGCTGGGGGGTTGACTATGCTATTGACAGACCGTCATTTTAACACTTCTTTCTTCGACCCTGTAGGTGGGGGTGATCCTGTTTTATTTCAGCACTTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea frons",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:420779",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea frons",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:420779",
"accession": "KP455059",
"identity": 0.99,
"query_cover": 0.9967
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea frons",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:420779",
"accession": "MW843009",
"identity": 0.987,
"query_cover": 0.9967
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea frons",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:420779",
"accession": "KP455014",
"identity": 0.986,
"query_cover": 0.9967
}
]
}
|
organismQuantity |
18.0
|
id |
2a7a1d82-7e14-4a82-a112-cec34e9115ac
|
scientificName |
Dendostrea frons
|
AphiaID |
420779
|
eventDate |
2022-02-16
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
S99
|
target_gene |
COI
|
DNA_sequence |
TTTGTCTACTTTTTCATACCATGGTATGTGTATAGACTTGGCTATTTTAAGGCTTCACTTAGCAGGTATTAGTTCAATCTTCAGGTCAATTAACTTTATGGTTACAATTACTAACATGCGATCAGTAGATGGCCATTTGTTAGCCTTGTTTCCTTGATCAATTAAAGTTACTTCTTTTCTGTTACTTACTACTTTGCCTGTGTTAGCTGGGGGGTTGACTATGCTATTGACAGACCGTCATTTTAACACTTCTTTCTTCGACCCTGTAGGTGGGGGTGATCCTGTTTTATTTCAGCACTTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea frons",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:420779",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea frons",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:420779",
"accession": "KP455059",
"identity": 0.99,
"query_cover": 0.9967
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea frons",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:420779",
"accession": "MW843009",
"identity": 0.987,
"query_cover": 0.9967
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea frons",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:420779",
"accession": "KP455014",
"identity": 0.986,
"query_cover": 0.9967
}
]
}
|
organismQuantity |
2.0
|
id |
646284aa-3c0e-4c74-bf5c-60fc27f19aa9
|
scientificName |
Dendostrea frons
|
AphiaID |
420779
|
eventDate |
2022-02-16
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
S133
|
target_gene |
COI
|
DNA_sequence |
TTTGTCTACTTTTTCATACCATGGTATGTGCATAGACTTGGCTATTTTAAGGCTTCACTTAGCAGGTATTAGTTCAATCTTCAGGTCAATTAACTTTATGGTTACAATTACTAACATGCGATCAGTAGATGGCCATTTGTTAGCCTTGTTTCCTTGATCAATTAAAGTTACTTCTTTTCTGTTACTTACTACTTTGCCTG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea frons",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:420779",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea frons",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:420779",
"accession": "KP455014",
"identity": 0.99,
"query_cover": 0.995
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea frons",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:420779",
"accession": "KP455059",
"identity": 0.99,
"query_cover": 0.995
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea frons",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:420779",
"accession": "MW843009",
"identity": 0.99,
"query_cover": 0.995
}
]
}
|
organismQuantity |
1.0
|
id |
0ad237ef-b2c4-4c87-9493-b0dc77843f6a
|
scientificName |
Dendostrea frons
|
AphiaID |
420779
|
eventDate |
2022-02-16
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
S102
|
target_gene |
COI
|
DNA_sequence |
TTTGTCTACTTTTTCATACCACGGTATGTGTATAGACTTGGCTATTTTAAGACTTCACTTAGCAGGTATTAGTTCAATTTTCAGGTCAATTAACTTTATGGTTACAATTACTAACATGCGATCAGTAGATGGCCATCTGTTAGCCTTGTTTCCTTGATCAATTAAAGTTACTTCTTTTCTGTTGCTTACTACTTTGCCTGTGTTAGCTGGGGGGTTGACTATGCTACTGACAGACCGTCATTTTAACACTTCTTTCTTCGACCCGGTAGGTGGGGGTGATCCTGTTTTATTTCAGCACTTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea frons",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:420779",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea frons",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:420779",
"accession": "KP455059",
"identity": 0.973,
"query_cover": 0.9967
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea frons",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:420779",
"accession": "MW843009",
"identity": 0.97,
"query_cover": 0.9967
}
]
}
|
organismQuantity |
14.0
|
id |
3bcdf346-de77-4e67-b0bd-49cc86664ea8
|
scientificName |
Dendostrea frons
|
AphiaID |
420779
|
eventDate |
2022-02-16
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
S133
|
target_gene |
COI
|
DNA_sequence |
TTTGTCTACTTTTTCATACCACGGTATGTGTATAGACTTGGCTATTTTAAGACTTCACTTAGCAGGTATTAGTTCAATTTTCAGGTCAATTAACTTTATGGTTACAATTACTAACATGCGATCAGTAGATGGCCATCTGTTAGCTTTGTTTCCTTGATCAATTAAAGTTACTTCTTTTCTGTTACTTACTACTTTGCCTGTGTTAGCTGGGGGGTTGACTATGCTACTGACAGACCGTCATTTTAACACTTCTTTCTTCGACCCGGTAGGTGGGGGTGATCCTGTTTTATTTCAGCACTTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea frons",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:420779",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea frons",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:420779",
"accession": "KP455059",
"identity": 0.973,
"query_cover": 0.9967
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea frons",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:420779",
"accession": "MW843009",
"identity": 0.97,
"query_cover": 0.9967
}
]
}
|
organismQuantity |
12.0
|
id |
77c710d4-45ad-44e1-b571-4c139608fb76
|
scientificName |
Dendostrea frons
|
AphiaID |
420779
|
eventDate |
2022-02-16
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
S99
|
target_gene |
COI
|
DNA_sequence |
TTTGTCTACTTTTTCATACCACGGTATGTGTATAGACTTGGCTATTTTAAGACTTCACTTAGCAGGTATTAGTTCAATTTTCAGGTCAATTAACTTTATGGTTACAATTACTAACATGCGATCAGTAGATGGCCATCTGTTAGCCTTGTTTCCTTGATCAATTAAAGTTACTTCTTTTCTGTTGCTTACTACTTTGCCTGTGTTAGCTGGGGGGTTGACTATGCTACTGACAGACCGTCATTTTAACACTTCTTTCTTCGACCCGGTAGGTGGGGGTGATCCTGTTTTATTCCAGCACTTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea frons",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:420779",
"confidence": 1
}
]
}
|
organismQuantity |
11.0
|
id |
d26fbc61-1c36-4a85-a717-031a0d9ef702
|
scientificName |
Dendostrea frons
|
AphiaID |
420779
|
eventDate |
2022-02-16
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
S98
|
target_gene |
COI
|
DNA_sequence |
TTTGTCTACTTTTTCATACCACGGTATGTGTATAGACTTGGCTATTTTAAGACTTCACTTAGCAGGTATTAGTTCAATTTTCAGGTCAATTAACTTTATGGTTACAATTACTAACATGCGATCAGTAGATGGCCATCTGTTAGCCTTGTTTCCTTGATCAATTAAAGTTACTTCTTTTCTGTTGCTTACTACTTTGCCTGTGTTAGCTGGGGGGTTGACTATGCTACTGACAGACCGTCATTTTAACACTTCTTTCTTCGACCCGGTAGGTGGGGGTGATCCTGTTTTATTTCAGCACTTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea frons",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:420779",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea frons",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:420779",
"accession": "KP455059",
"identity": 0.973,
"query_cover": 0.9967
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea frons",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:420779",
"accession": "MW843009",
"identity": 0.97,
"query_cover": 0.9967
}
]
}
|
organismQuantity |
11.0
|
id |
0e2fce1e-652f-491e-b19b-6d3d5d37896c
|
scientificName |
Dendostrea frons
|
AphiaID |
420779
|
eventDate |
2022-02-16
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
S133
|
target_gene |
COI
|
DNA_sequence |
TTTGTCTACTTTTTCATACCACGGTATGTGTATAGACTTGGCTATTTTAAGACTTCACTTAGCAGGTATTAGTTCAATTTTCAGGTCAATTAACTTTATGGTTACAATTACTAACATGCGATCAGTAGATGGCCATCTGTTAGCCTTGTTTCCTTGATCAATTAAAGTTACTTCTTTTCTGTTGCTTACTACTTTGCCTGTGTTAGCTGGGGGGTTGACTATGCTACTGACAGACCGTCATTTTAACACTTCTTTCTTCGACCCGGTAGGTGGGGGTGATCCTGTTTTATTTCAGCACTTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea frons",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:420779",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea frons",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:420779",
"accession": "KP455059",
"identity": 0.973,
"query_cover": 0.9967
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea frons",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:420779",
"accession": "MW843009",
"identity": 0.97,
"query_cover": 0.9967
}
]
}
|
organismQuantity |
6.0
|
id |
b0beeead-e191-4b5d-8225-60b65304d16c
|
scientificName |
Dendostrea frons
|
AphiaID |
420779
|
eventDate |
2022-02-16
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
S98
|
target_gene |
COI
|
DNA_sequence |
TTTGTCTACTTTTTCATACCACGGTATGTGTATAGACTTGGCTATTTTAAGACTTCACTTAGCAGGTATTAGTTCAATTTTCAGGTCAATTAACTTTATGGTTACAATTACTAACATGCGATCAGTAGATGGCCATCTGTTAGCTTTGTTTCCTTGATCAATTAAAGTTACTTCTTTTCTGTTACTTACTACTTTGCCTGTGTTAGCTGGGGGGTTGACTATGCTACTGACAGACCGTCATTTTAACACTTCTTTCTTCGACCCGGTAGGTGGGGGTGATCCTGTTTTATTTCAGCACTTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea frons",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:420779",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea frons",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:420779",
"accession": "KP455059",
"identity": 0.973,
"query_cover": 0.9967
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea frons",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:420779",
"accession": "MW843009",
"identity": 0.97,
"query_cover": 0.9967
}
]
}
|
organismQuantity |
6.0
|
id |
e13c7cba-245f-4936-8165-c78ab75d2d4b
|
scientificName |
Dendostrea frons
|
AphiaID |
420779
|
eventDate |
2022-02-16
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
S133
|
target_gene |
COI
|
DNA_sequence |
TTTGTCTACTTTTTCATACCACGGTATGTGTATAGACTTGGCTATTTTAAGACTTCACTTAGCAGGTATTAGTTCAATTTTCAGGTCAATTAACTTTATGGTTACAATTACTAACATGCGATCAGTAGATGGCCATCTGTTAGCCTTGTTTCCTTGATCAATTAAAGTTACTTCTTTTCTGTTGCTTACTACTTTGCCTGTGTTAGCTGGGGGGTTGACTATGCTACTGACAGACCGTCATTTTAACACTTCTTTCTTCGACCCGGTAGGTGGGGGTGATCCTGTTTTATTCCAGCACTTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea frons",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:420779",
"confidence": 1
}
]
}
|
organismQuantity |
6.0
|
id |
f62c76fa-43f5-492f-b2a5-0fb634180b43
|
scientificName |
Dendostrea frons
|
AphiaID |
420779
|
eventDate |
2022-02-16
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
S98
|
target_gene |
COI
|
DNA_sequence |
TTTGTCTACTTTTTCATACCATGGTATGTGCATAGACTTGGCTATTTTAAGGCTTCACTTAGCAGGTATTAGTTCAATCTTCAGGTCAATTAACTTTATGGTTACAATTACTAACATGCGATCAGTAGATGGCCATTTGTTAGCCTTGTTTCCTTGATCAATTAAAGTTACTTCTTTTCTGTTACTTACTACTTTGCCTGTGTTAGCTGGGGGGTTGACTATGCTATTGACAGACCGTCATTTTAACACTTCTTTCTTCGACCCTGTAGGTGGGGGTGATCCTGTTTTATTTCAGCACTTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea frons",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:420779",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea frons",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:420779",
"accession": "KP455059",
"identity": 0.986,
"query_cover": 0.9967
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea frons",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:420779",
"accession": "MW843009",
"identity": 0.984,
"query_cover": 0.9967
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea frons",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:420779",
"accession": "KP455014",
"identity": 0.983,
"query_cover": 0.9967
}
]
}
|
organismQuantity |
6.0
|
id |
34b43ec9-2c6f-4df4-9dfc-71c1341127e5
|
scientificName |
Dendostrea frons
|
AphiaID |
420779
|
eventDate |
2022-02-16
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
S133
|
target_gene |
COI
|
DNA_sequence |
TTTGTCTACTTTTTCATACCATGGTATGTGCATAGACTTGGCTATTTTAAGGCTTCACTTAGCAGGTATTAGTTCAATCTTCAGGTCAATTAACTTTATGGTTACAATTACTAACATGCGATCAGTAGATGGCCATTTGTTAGCCTTGTTTCCTTGATCAATTAAAGTTACTTCTTTTCTGTTACTTACTACTTTGCCTGTGTTAGCTGGGGGGTTGACTATGCTATTGACAGACCGTCATTTTAACACTTCTTTCTTCGACCCTGTAGGTGGGGGTGATCCTGTTTTATTTCAGCACTTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea frons",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:420779",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea frons",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:420779",
"accession": "KP455059",
"identity": 0.986,
"query_cover": 0.9967
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea frons",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:420779",
"accession": "MW843009",
"identity": 0.984,
"query_cover": 0.9967
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea frons",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:420779",
"accession": "KP455014",
"identity": 0.983,
"query_cover": 0.9967
}
]
}
|
organismQuantity |
3.0
|
id |
8444a58a-b814-487c-a91e-261a1fd0ac35
|
scientificName |
Dendostrea frons
|
AphiaID |
420779
|
eventDate |
2022-02-16
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
S98
|
target_gene |
COI
|
DNA_sequence |
TTTGTCTACTTTTTCATACCACGGTATGTGTATAGACTTGGCTATTTTAAGACTTCACTTAGCAGGTATTAGTTCAATTTTCAGGTCAATTAACTTTATGGTTACAATTACTAACATGCGATCAGTAGATGGCCATCTGTTAGCTTTGTTTCCTTGATCAATTAAAGTTACTTCTTTTCTGTTACTTACTACTTTGCCTGTGTTAGCTGGGGGGTTAACTATGCTACTGACAGACCGTCATTTTAACACTTCTTTCTTCGACCCGGTAGGTGGGGGTGATCCTGTTTTATTTCAGCACTTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea frons",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:420779",
"confidence": 1
}
]
}
|
organismQuantity |
3.0
|
id |
0d8071fd-3f06-40d2-8c52-5bad52a89706
|
scientificName |
Dendostrea frons
|
AphiaID |
420779
|
eventDate |
2022-02-16
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
S102
|
target_gene |
COI
|
DNA_sequence |
TTTGTCTACTTTTTCATACCACGGTATGTGTATAGACTTGGCTATTTTAAGACTTCACTTAGCAGGTATTAGTTCAATTTTCAGGTCAATTAACTTTATGGTTACAATTACTAACATGCGATCAGTAGATGGCCATCTGTTAGCCTTGTTTCCTTGATCAATTAAAGTTACTTCTTTTCTGTTGCTTACTACTTTGCCTGTGTTAGCTGGGGGGTTGACTATGCTACTGACAGACCGTCATTTTAACACTTCTTTCTTCGACCCGGTAGGTGGGGGTGATCCTGTTTTATTCCAGCACTTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea frons",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:420779",
"confidence": 1
}
]
}
|
organismQuantity |
1.0
|
id |
589afad7-2ed1-4f21-8287-e554fe2ea399
|
scientificName |
Dendostrea frons
|
AphiaID |
420779
|
eventDate |
2022-02-16
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
S102
|
target_gene |
COI
|
DNA_sequence |
TTTGTCTACTTTTTCATACCACGGTATGTGTATAGACTTGGCTATTTTAAGACTTCACTTAGCAGGTATTAGTTCAATTTTCAGGTCAATTAACTTTATGGTTACAATTACTAACATGCGATCAGTAGATGGCCATCTGTTAGCCTTGTTTCCTTGATCAATTAAAGTTACTTCCTTTCTGTTGCTTACTACTTTGCCTGTGTTAGCTGGGGGGTTGACTATGCTACTGACAGACCGTCATTTTAACACTTCTTTCTTCGACCCGGTAGGTGGGGGTGATCCTGTTTTATTTCAGCACTTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea frons",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:420779",
"confidence": 1
}
]
}
|
organismQuantity |
1.0
|
|