PacMAN decision support system

Potential detection of Halocynthia roretzi in Fiji

Description:

Potential detection of Halocynthia roretzi with confidence low on 2023-04-27 in material sample USP-24-01-06, marker 18S

Confidence:

low

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Halocynthia roretzi
Chordata > Ascidiacea > Stolidobranchia > Pyuridae
WoRMS: 250680

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

1.0

Reads:

10239.0

Names:

7

Occurrences:

view occurrences

id	4eff86fb-dfb2-4c47-bf39-a706449d21cf
scientificName	Pyura
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-06
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pyura", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103524", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Metandrocarpa_taylori", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250836", "accession": "AY903922.1.1772_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_roretzi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250680", "accession": "AB013016.1.1751_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Cnemidocarpa_finmarkiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103870", "accession": "L12413.1.1763_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Pyura_haustor", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251266", "accession": "AY903926.1.1774_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_igaboja", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250677", "accession": "AY903925.1.1772_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	10239.0

id	6e564499-823a-4916-b618-192371be363e
scientificName	Pyura
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-09
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pyura", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103524", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Metandrocarpa_taylori", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250836", "accession": "AY903922.1.1772_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_roretzi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250680", "accession": "AB013016.1.1751_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Cnemidocarpa_finmarkiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103870", "accession": "L12413.1.1763_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Pyura_haustor", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251266", "accession": "AY903926.1.1774_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_igaboja", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250677", "accession": "AY903925.1.1772_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	7011.0

id	c1550358-b860-4759-a43b-7ffb888fa5b9
scientificName	Pyura
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-03
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pyura", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103524", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Metandrocarpa_taylori", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250836", "accession": "AY903922.1.1772_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_roretzi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250680", "accession": "AB013016.1.1751_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Cnemidocarpa_finmarkiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103870", "accession": "L12413.1.1763_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Pyura_haustor", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251266", "accession": "AY903926.1.1774_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_igaboja", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250677", "accession": "AY903925.1.1772_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	6151.0

id	d67f7fca-3b31-4de5-902e-3ac935f7b955
scientificName	Pyura
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-05
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pyura", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103524", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Metandrocarpa_taylori", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250836", "accession": "AY903922.1.1772_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_roretzi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250680", "accession": "AB013016.1.1751_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Cnemidocarpa_finmarkiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103870", "accession": "L12413.1.1763_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Pyura_haustor", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251266", "accession": "AY903926.1.1774_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_igaboja", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250677", "accession": "AY903925.1.1772_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	5111.0

id	e96b41fa-0d51-45d4-8de4-42fb6172ad3f
scientificName	Pyura
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-01
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pyura", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103524", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Metandrocarpa_taylori", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250836", "accession": "AY903922.1.1772_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_roretzi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250680", "accession": "AB013016.1.1751_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Cnemidocarpa_finmarkiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103870", "accession": "L12413.1.1763_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Pyura_haustor", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251266", "accession": "AY903926.1.1774_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_igaboja", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250677", "accession": "AY903925.1.1772_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	4113.0

id	4fdff631-5ee3-457c-93f0-e034c9ac9d7e
scientificName	Pyura
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-02
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pyura", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103524", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Metandrocarpa_taylori", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250836", "accession": "AY903922.1.1772_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_roretzi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250680", "accession": "AB013016.1.1751_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Cnemidocarpa_finmarkiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103870", "accession": "L12413.1.1763_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Pyura_haustor", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251266", "accession": "AY903926.1.1774_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_igaboja", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250677", "accession": "AY903925.1.1772_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	1835.0

id	5085635a-c65a-4a33-b300-57e73054a59e
scientificName	Pyura
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-10
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pyura", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103524", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Metandrocarpa_taylori", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250836", "accession": "AY903922.1.1772_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_roretzi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250680", "accession": "AB013016.1.1751_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Cnemidocarpa_finmarkiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103870", "accession": "L12413.1.1763_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Pyura_haustor", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251266", "accession": "AY903926.1.1774_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_igaboja", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250677", "accession": "AY903925.1.1772_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	1163.0

id	a0617fc9-3895-4ba4-bc3c-79ca96118b29
scientificName	Pyura
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-07
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pyura", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103524", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Metandrocarpa_taylori", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250836", "accession": "AY903922.1.1772_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_roretzi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250680", "accession": "AB013016.1.1751_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Cnemidocarpa_finmarkiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103870", "accession": "L12413.1.1763_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Pyura_haustor", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251266", "accession": "AY903926.1.1774_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_igaboja", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250677", "accession": "AY903925.1.1772_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	1160.0

id	52c90924-d786-41fc-b345-870a5906ec68
scientificName	Pyura
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-04
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pyura", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103524", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Metandrocarpa_taylori", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250836", "accession": "AY903922.1.1772_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_roretzi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250680", "accession": "AB013016.1.1751_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Cnemidocarpa_finmarkiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103870", "accession": "L12413.1.1763_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Pyura_haustor", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251266", "accession": "AY903926.1.1774_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_igaboja", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250677", "accession": "AY903925.1.1772_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	757.0

id	1da2b547-8bf0-43b5-a83c-f6d29ccb0c46
scientificName	Pyura
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-08
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pyura", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103524", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Metandrocarpa_taylori", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250836", "accession": "AY903922.1.1772_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_roretzi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250680", "accession": "AB013016.1.1751_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Cnemidocarpa_finmarkiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103870", "accession": "L12413.1.1763_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Pyura_haustor", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251266", "accession": "AY903926.1.1774_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_igaboja", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250677", "accession": "AY903925.1.1772_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	392.0

id	7edbb857-1d99-407e-b7ba-a78432a812cc
scientificName	Pyura
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-13
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pyura", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103524", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Metandrocarpa_taylori", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250836", "accession": "AY903922.1.1772_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_roretzi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250680", "accession": "AB013016.1.1751_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Cnemidocarpa_finmarkiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103870", "accession": "L12413.1.1763_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Pyura_haustor", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251266", "accession": "AY903926.1.1774_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_igaboja", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250677", "accession": "AY903925.1.1772_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	79.0

id	0be7f770-2d97-42e8-b43e-471534424208
scientificName	Pyura
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-12
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pyura", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103524", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Metandrocarpa_taylori", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250836", "accession": "AY903922.1.1772_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_roretzi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250680", "accession": "AB013016.1.1751_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Cnemidocarpa_finmarkiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103870", "accession": "L12413.1.1763_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Pyura_haustor", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251266", "accession": "AY903926.1.1774_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_igaboja", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250677", "accession": "AY903925.1.1772_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	52.0

id	d9a61f37-34ec-4fe6-9897-09bb4928fbc7
scientificName	Pyura
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-11
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pyura", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103524", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Metandrocarpa_taylori", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250836", "accession": "AY903922.1.1772_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_roretzi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250680", "accession": "AB013016.1.1751_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Cnemidocarpa_finmarkiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103870", "accession": "L12413.1.1763_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Pyura_haustor", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251266", "accession": "AY903926.1.1774_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_igaboja", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250677", "accession": "AY903925.1.1772_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	27.0

id	74c13cff-a45f-4f92-881e-ae4f21777dfb
scientificName	Pyura
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-17
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pyura", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103524", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Metandrocarpa_taylori", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250836", "accession": "AY903922.1.1772_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_roretzi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250680", "accession": "AB013016.1.1751_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Cnemidocarpa_finmarkiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103870", "accession": "L12413.1.1763_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Pyura_haustor", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251266", "accession": "AY903926.1.1774_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_igaboja", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250677", "accession": "AY903925.1.1772_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	19.0

id	0f0b0fc0-b034-4543-80d6-ab5679189652
scientificName	Pyura
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-15
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pyura", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103524", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Metandrocarpa_taylori", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250836", "accession": "AY903922.1.1772_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_roretzi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250680", "accession": "AB013016.1.1751_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Cnemidocarpa_finmarkiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103870", "accession": "L12413.1.1763_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Pyura_haustor", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251266", "accession": "AY903926.1.1774_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_igaboja", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250677", "accession": "AY903925.1.1772_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	13.0

id	6314837e-7beb-4afe-b676-7b9a1e1919c2
scientificName	Pyura
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-18
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pyura", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103524", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Metandrocarpa_taylori", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250836", "accession": "AY903922.1.1772_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_roretzi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250680", "accession": "AB013016.1.1751_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Cnemidocarpa_finmarkiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103870", "accession": "L12413.1.1763_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Pyura_haustor", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251266", "accession": "AY903926.1.1774_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_igaboja", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250677", "accession": "AY903925.1.1772_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	7.0

id	0b1453b3-de4d-487f-852c-b9a3e0115d32
scientificName	Pyura
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-19
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pyura", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103524", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Metandrocarpa_taylori", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250836", "accession": "AY903922.1.1772_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_roretzi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250680", "accession": "AB013016.1.1751_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Cnemidocarpa_finmarkiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103870", "accession": "L12413.1.1763_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Pyura_haustor", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251266", "accession": "AY903926.1.1774_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_igaboja", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250677", "accession": "AY903925.1.1772_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	2.0

id	8e8d866f-4c6e-497f-8666-1fda695be61e
scientificName	Pyura
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-20
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pyura", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103524", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Metandrocarpa_taylori", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250836", "accession": "AY903922.1.1772_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_roretzi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250680", "accession": "AB013016.1.1751_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Cnemidocarpa_finmarkiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103870", "accession": "L12413.1.1763_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Pyura_haustor", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251266", "accession": "AY903926.1.1774_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_igaboja", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250677", "accession": "AY903925.1.1772_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	2.0

Halocynthia roretzi in Fiji

Status

Halocynthia roretzi does not have an offial status in Fiji.

Notes

No notes found.