PacMAN decision support system

Potential detection of Ostrea chilensis in Fiji

Description:

Potential detection of Ostrea chilensis with confidence low on 2023-04-27 in material sample USP-24-01-04, marker 18S

Confidence:

low

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Ostrea chilensis
Mollusca > Bivalvia > Ostreida > Ostreidae
WoRMS: 397160

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

0.995

Reads:

56.0

Names:

4

Occurrences:

view occurrences

id	19c81fb4-8390-4562-beb3-d636652b1f4b
scientificName	Magallana gigas
AphiaID	836033
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-04
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGCTGGATCTCGGGTCCAGGCTGGCGGTCCGCCTCGTTGCGGTCACTGCCTGTCCTGACCCAACCTCTCGGTTGTAAACCCTTGGTGCTCTTGACTGAGTTGCTTCGGGTGGCCGAAACTTTTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "confidence": 0.8 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AB064942.1.1820_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AFTI01027729.1.1382_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea edulis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140658", "accession": "EU660786.1.875_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "EU660790.1.875_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea chilensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:397160", "accession": "EU660788.1.875_U", "identity": 0.995, "query_cover": 0.9952 } ] }
organismQuantity	56.0

id	20aeb954-f255-4c12-9bb0-687132225509
scientificName	Magallana gigas
AphiaID	836033
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-12
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGCTGGATCTCGGGTCCAGGCTGGCGGTCCGCCTCGTTGCGGTCACTGCCTGTCCTGACCCAACCTCTCGGTTGTAAACCCTTGGTGCTCTTGACTGAGTTGCTTCGGGTGGCCGAAACTTTTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "confidence": 0.8 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AB064942.1.1820_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AFTI01027729.1.1382_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea edulis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140658", "accession": "EU660786.1.875_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "EU660790.1.875_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea chilensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:397160", "accession": "EU660788.1.875_U", "identity": 0.995, "query_cover": 0.9952 } ] }
organismQuantity	24.0

id	0b92caf9-0d66-495f-929b-5875154a1946
scientificName	Magallana gigas
AphiaID	836033
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-09
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGCTGGATCTCGGGTCCAGGCTGGCGGTCCGCCTCGTTGCGGTCACTGCCTGTCCTGACCCAACCTCTCGGTTGTAAACCCTTGGTGCTCTTGACTGAGTTGCTTCGGGTGGCCGAAACTTTTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "confidence": 0.8 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AB064942.1.1820_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AFTI01027729.1.1382_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea edulis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140658", "accession": "EU660786.1.875_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "EU660790.1.875_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea chilensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:397160", "accession": "EU660788.1.875_U", "identity": 0.995, "query_cover": 0.9952 } ] }
organismQuantity	22.0

id	c494a9b2-21d2-4992-a77c-ad755a77cb59
scientificName	Magallana gigas
AphiaID	836033
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-05
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGCTGGATCTCGGGTCCAGGCTGGCGGTCCGCCTCGTTGCGGTCACTGCCTGTCCTGACCCAACCTCTCGGTTGTAAACCCTTGGTGCTCTTGACTGAGTTGCTTCGGGTGGCCGAAACTTTTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "confidence": 0.8 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AB064942.1.1820_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AFTI01027729.1.1382_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea edulis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140658", "accession": "EU660786.1.875_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "EU660790.1.875_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea chilensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:397160", "accession": "EU660788.1.875_U", "identity": 0.995, "query_cover": 0.9952 } ] }
organismQuantity	15.0

id	29a9d1f7-6a89-4e60-8e1b-d2e5e3b24763
scientificName	Magallana gigas
AphiaID	836033
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-07
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGCTGGATCTCGGGTCCAGGCTGGCGGTCCGCCTCGTTGCGGTCACTGCCTGTCCTGACCCAACCTCTCGGTTGTAAACCCTTGGTGCTCTTGACTGAGTTGCTTCGGGTGGCCGAAACTTTTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "confidence": 0.8 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AB064942.1.1820_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AFTI01027729.1.1382_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea edulis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140658", "accession": "EU660786.1.875_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "EU660790.1.875_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea chilensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:397160", "accession": "EU660788.1.875_U", "identity": 0.995, "query_cover": 0.9952 } ] }
organismQuantity	12.0

id	a5d11579-82fe-4b0b-af21-c64a5366c7a4
scientificName	Magallana gigas
AphiaID	836033
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-13
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGCTGGATCTCGGGTCCAGGCTGGCGGTCCGCCTCGTTGCGGTCACTGCCTGTCCTGACCCAACCTCTCGGTTGTAAACCCTTGGTGCTCTTGACTGAGTTGCTTCGGGTGGCCGAAACTTTTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "confidence": 0.8 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AB064942.1.1820_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AFTI01027729.1.1382_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea edulis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140658", "accession": "EU660786.1.875_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "EU660790.1.875_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea chilensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:397160", "accession": "EU660788.1.875_U", "identity": 0.995, "query_cover": 0.9952 } ] }
organismQuantity	8.0

id	eb567cfe-b17a-44a0-9b6d-ea4e9a5e702b
scientificName	Magallana gigas
AphiaID	836033
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-10
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGCTGGATCTCGGGTCCAGGCTGGCGGTCCGCCTCGTTGCGGTCACTGCCTGTCCTGACCCAACCTCTCGGTTGTAAACCCTTGGTGCTCTTGACTGAGTTGCTTCGGGTGGCCGAAACTTTTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "confidence": 0.8 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AB064942.1.1820_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AFTI01027729.1.1382_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea edulis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140658", "accession": "EU660786.1.875_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "EU660790.1.875_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea chilensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:397160", "accession": "EU660788.1.875_U", "identity": 0.995, "query_cover": 0.9952 } ] }
organismQuantity	5.0

id	461dd5bc-fb7d-402a-bcd2-cb8eae7fea13
scientificName	Magallana gigas
AphiaID	836033
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-03
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGCTGGATCTCGGGTCCAGGCTGGCGGTCCGCCTCGTTGCGGTCACTGCCTGTCCTGACCCAACCTCTCGGTTGTAAACCCTTGGTGCTCTTGACTGAGTTGCTTCGGGTGGCCGAAACTTTTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "confidence": 0.8 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AB064942.1.1820_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AFTI01027729.1.1382_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea edulis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140658", "accession": "EU660786.1.875_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "EU660790.1.875_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea chilensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:397160", "accession": "EU660788.1.875_U", "identity": 0.995, "query_cover": 0.9952 } ] }
organismQuantity	4.0

id	91bceaf1-f2a5-4512-a07c-3c00ef618376
scientificName	Magallana gigas
AphiaID	836033
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-11
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGCTGGATCTCGGGTCCAGGCTGGCGGTCCGCCTCGTTGCGGTCACTGCCTGTCCTGACCCAACCTCTCGGTTGTAAACCCTTGGTGCTCTTGACTGAGTTGCTTCGGGTGGCCGAAACTTTTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "confidence": 0.8 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AB064942.1.1820_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AFTI01027729.1.1382_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea edulis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140658", "accession": "EU660786.1.875_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "EU660790.1.875_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea chilensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:397160", "accession": "EU660788.1.875_U", "identity": 0.995, "query_cover": 0.9952 } ] }
organismQuantity	3.0

id	f29d2eef-f187-42c1-984d-dff7b365e636
scientificName	Magallana gigas
AphiaID	836033
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-20
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGCTGGATCTCGGGTCCAGGCTGGCGGTCCGCCTCGTTGCGGTCACTGCCTGTCCTGACCCAACCTCTCGGTTGTAAACCCTTGGTGCTCTTGACTGAGTTGCTTCGGGTGGCCGAAACTTTTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "confidence": 0.8 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AB064942.1.1820_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AFTI01027729.1.1382_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea edulis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140658", "accession": "EU660786.1.875_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "EU660790.1.875_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea chilensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:397160", "accession": "EU660788.1.875_U", "identity": 0.995, "query_cover": 0.9952 } ] }
organismQuantity	3.0

id	b77ec64e-825c-48be-9590-858d8d879a5b
scientificName	Magallana gigas
AphiaID	836033
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-02
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGCTGGATCTCGGGTCCAGGCTGGCGGTCCGCCTCGTTGCGGTCACTGCCTGTCCTGACCCAACCTCTCGGTTGTAAACCCTTGGTGCTCTTGACTGAGTTGCTTCGGGTGGCCGAAACTTTTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "confidence": 0.8 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AB064942.1.1820_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AFTI01027729.1.1382_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea edulis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140658", "accession": "EU660786.1.875_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "EU660790.1.875_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea chilensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:397160", "accession": "EU660788.1.875_U", "identity": 0.995, "query_cover": 0.9952 } ] }
organismQuantity	1.0

id	da7e469d-5dc0-4551-94a9-ef3ad0a653c6
scientificName	Magallana gigas
AphiaID	836033
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-08
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGCTGGATCTCGGGTCCAGGCTGGCGGTCCGCCTCGTTGCGGTCACTGCCTGTCCTGACCCAACCTCTCGGTTGTAAACCCTTGGTGCTCTTGACTGAGTTGCTTCGGGTGGCCGAAACTTTTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "confidence": 0.8 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AB064942.1.1820_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AFTI01027729.1.1382_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea edulis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140658", "accession": "EU660786.1.875_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "EU660790.1.875_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea chilensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:397160", "accession": "EU660788.1.875_U", "identity": 0.995, "query_cover": 0.9952 } ] }
organismQuantity	1.0

id	ad2be395-4841-4783-84ae-7c7f3987e255
scientificName	Magallana gigas
AphiaID	836033
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-04
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGCTGGATCTCGGGTCCAGGCTGGCGGTCCGCCTCGTTGCGGTCACTGCTTGTCCTGACCCAACCTCTCGGTTGTAAACCCTTGGTGCTCTTGACTGAGTTGCTTCGGGTGGCCGAAACTTTTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "confidence": 0.81 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AB064942.1.1820_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AFTI01027729.1.1382_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea edulis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140658", "accession": "EU660786.1.875_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "EU660790.1.875_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea chilensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:397160", "accession": "EU660788.1.875_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	9539.0

id	7e575ba3-3592-4690-b9be-1e0323d42d45
scientificName	Magallana gigas
AphiaID	836033
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-09
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGCTGGATCTCGGGTCCAGGCTGGCGGTCCGCCTCGTTGCGGTCACTGCTTGTCCTGACCCAACCTCTCGGTTGTAAACCCTTGGTGCTCTTGACTGAGTTGCTTCGGGTGGCCGAAACTTTTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "confidence": 0.81 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AB064942.1.1820_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AFTI01027729.1.1382_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea edulis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140658", "accession": "EU660786.1.875_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "EU660790.1.875_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea chilensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:397160", "accession": "EU660788.1.875_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	4232.0

id	ad49c72f-6b75-4a03-8614-04623de135aa
scientificName	Magallana gigas
AphiaID	836033
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-05
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGCTGGATCTCGGGTCCAGGCTGGCGGTCCGCCTCGTTGCGGTCACTGCTTGTCCTGACCCAACCTCTCGGTTGTAAACCCTTGGTGCTCTTGACTGAGTTGCTTCGGGTGGCCGAAACTTTTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "confidence": 0.81 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AB064942.1.1820_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AFTI01027729.1.1382_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea edulis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140658", "accession": "EU660786.1.875_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "EU660790.1.875_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea chilensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:397160", "accession": "EU660788.1.875_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	2780.0

id	b2c6092b-c335-48e2-b420-92468ecaa58b
scientificName	Magallana gigas
AphiaID	836033
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-07
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGCTGGATCTCGGGTCCAGGCTGGCGGTCCGCCTCGTTGCGGTCACTGCTTGTCCTGACCCAACCTCTCGGTTGTAAACCCTTGGTGCTCTTGACTGAGTTGCTTCGGGTGGCCGAAACTTTTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "confidence": 0.81 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AB064942.1.1820_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AFTI01027729.1.1382_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea edulis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140658", "accession": "EU660786.1.875_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "EU660790.1.875_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea chilensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:397160", "accession": "EU660788.1.875_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	1822.0

id	ce419375-014a-4e64-bc35-e26efabbcaca
scientificName	Magallana gigas
AphiaID	836033
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-02
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGCTGGATCTCGGGTCCAGGCTGGCGGTCCGCCTCGTTGCGGTCACTGCTTGTCCTGACCCAACCTCTCGGTTGTAAACCCTTGGTGCTCTTGACTGAGTTGCTTCGGGTGGCCGAAACTTTTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "confidence": 0.81 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AB064942.1.1820_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AFTI01027729.1.1382_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea edulis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140658", "accession": "EU660786.1.875_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "EU660790.1.875_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea chilensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:397160", "accession": "EU660788.1.875_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	1612.0

id	b79dbc82-4fc4-4c37-9d50-a5a8d7f2a8fd
scientificName	Magallana gigas
AphiaID	836033
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-03
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGCTGGATCTCGGGTCCAGGCTGGCGGTCCGCCTCGTTGCGGTCACTGCTTGTCCTGACCCAACCTCTCGGTTGTAAACCCTTGGTGCTCTTGACTGAGTTGCTTCGGGTGGCCGAAACTTTTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "confidence": 0.81 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AB064942.1.1820_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AFTI01027729.1.1382_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea edulis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140658", "accession": "EU660786.1.875_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "EU660790.1.875_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea chilensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:397160", "accession": "EU660788.1.875_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	1508.0

id	cb6855a5-a87f-4a68-985b-132c8571faaf
scientificName	Magallana gigas
AphiaID	836033
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-11
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGCTGGATCTCGGGTCCAGGCTGGCGGTCCGCCTCGTTGCGGTCACTGCTTGTCCTGACCCAACCTCTCGGTTGTAAACCCTTGGTGCTCTTGACTGAGTTGCTTCGGGTGGCCGAAACTTTTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "confidence": 0.81 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AB064942.1.1820_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AFTI01027729.1.1382_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea edulis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140658", "accession": "EU660786.1.875_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "EU660790.1.875_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea chilensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:397160", "accession": "EU660788.1.875_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	1320.0

id	449efc46-2acd-460e-9aea-8a6cd9c0a87f
scientificName	Magallana gigas
AphiaID	836033
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-06
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGCTGGATCTCGGGTCCAGGCTGGCGGTCCGCCTCGTTGCGGTCACTGCTTGTCCTGACCCAACCTCTCGGTTGTAAACCCTTGGTGCTCTTGACTGAGTTGCTTCGGGTGGCCGAAACTTTTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "confidence": 0.81 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AB064942.1.1820_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AFTI01027729.1.1382_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea edulis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140658", "accession": "EU660786.1.875_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "EU660790.1.875_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea chilensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:397160", "accession": "EU660788.1.875_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	978.0

id	e09eaeff-a21b-4141-8729-0da6b40a0e23
scientificName	Magallana gigas
AphiaID	836033
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-08
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGCTGGATCTCGGGTCCAGGCTGGCGGTCCGCCTCGTTGCGGTCACTGCTTGTCCTGACCCAACCTCTCGGTTGTAAACCCTTGGTGCTCTTGACTGAGTTGCTTCGGGTGGCCGAAACTTTTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "confidence": 0.81 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AB064942.1.1820_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AFTI01027729.1.1382_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea edulis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140658", "accession": "EU660786.1.875_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "EU660790.1.875_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea chilensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:397160", "accession": "EU660788.1.875_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	399.0

id	3fe6dab2-58b2-4728-af2c-0bd15433ba85
scientificName	Magallana gigas
AphiaID	836033
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-10
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGCTGGATCTCGGGTCCAGGCTGGCGGTCCGCCTCGTTGCGGTCACTGCTTGTCCTGACCCAACCTCTCGGTTGTAAACCCTTGGTGCTCTTGACTGAGTTGCTTCGGGTGGCCGAAACTTTTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "confidence": 0.81 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AB064942.1.1820_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AFTI01027729.1.1382_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea edulis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140658", "accession": "EU660786.1.875_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "EU660790.1.875_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea chilensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:397160", "accession": "EU660788.1.875_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	371.0

id	1fc46400-d2b3-4cdd-b87e-b04060d63cc4
scientificName	Magallana gigas
AphiaID	836033
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-13
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGCTGGATCTCGGGTCCAGGCTGGCGGTCCGCCTCGTTGCGGTCACTGCTTGTCCTGACCCAACCTCTCGGTTGTAAACCCTTGGTGCTCTTGACTGAGTTGCTTCGGGTGGCCGAAACTTTTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "confidence": 0.81 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AB064942.1.1820_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AFTI01027729.1.1382_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea edulis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140658", "accession": "EU660786.1.875_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "EU660790.1.875_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea chilensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:397160", "accession": "EU660788.1.875_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	48.0

id	42071f55-a04a-49d8-8201-c17ae0b559a9
scientificName	Magallana gigas
AphiaID	836033
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-18
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGCTGGATCTCGGGTCCAGGCTGGCGGTCCGCCTCGTTGCGGTCACTGCTTGTCCTGACCCAACCTCTCGGTTGTAAACCCTTGGTGCTCTTGACTGAGTTGCTTCGGGTGGCCGAAACTTTTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "confidence": 0.81 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AB064942.1.1820_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AFTI01027729.1.1382_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea edulis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140658", "accession": "EU660786.1.875_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "EU660790.1.875_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea chilensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:397160", "accession": "EU660788.1.875_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	17.0

id	6b3bd288-9a7b-4f8b-b5f4-3d13ec5b95d7
scientificName	Magallana gigas
AphiaID	836033
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-19
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGCTGGATCTCGGGTCCAGGCTGGCGGTCCGCCTCGTTGCGGTCACTGCTTGTCCTGACCCAACCTCTCGGTTGTAAACCCTTGGTGCTCTTGACTGAGTTGCTTCGGGTGGCCGAAACTTTTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "confidence": 0.81 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AB064942.1.1820_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AFTI01027729.1.1382_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea edulis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140658", "accession": "EU660786.1.875_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "EU660790.1.875_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea chilensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:397160", "accession": "EU660788.1.875_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	8.0

id	aeca466b-6478-4e77-8ded-fee2e4a677c3
scientificName	Magallana gigas
AphiaID	836033
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-20
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGCTGGATCTCGGGTCCAGGCTGGCGGTCCGCCTCGTTGCGGTCACTGCTTGTCCTGACCCAACCTCTCGGTTGTAAACCCTTGGTGCTCTTGACTGAGTTGCTTCGGGTGGCCGAAACTTTTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "confidence": 0.81 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AB064942.1.1820_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AFTI01027729.1.1382_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea edulis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140658", "accession": "EU660786.1.875_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "EU660790.1.875_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea chilensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:397160", "accession": "EU660788.1.875_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	7.0

id	69159fa2-6076-41f2-9b38-86f453ef2966
scientificName	Magallana gigas
AphiaID	836033
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-16
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGCTGGATCTCGGGTCCAGGCTGGCGGTCCGCCTCGTTGCGGTCACTGCTTGTCCTGACCCAACCTCTCGGTTGTAAACCCTTGGTGCTCTTGACTGAGTTGCTTCGGGTGGCCGAAACTTTTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "confidence": 0.81 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AB064942.1.1820_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AFTI01027729.1.1382_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea edulis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140658", "accession": "EU660786.1.875_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "EU660790.1.875_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea chilensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:397160", "accession": "EU660788.1.875_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	5.0

id	27babf05-7eef-419c-8780-0fe1f96937f1
scientificName	Magallana gigas
AphiaID	836033
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-01
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGCTGGATCTCGGGTCCAGGCTGGCGGTCCGCCTCGTTGCGGTCACTGCTTGTCCTGACCCAACCTCTCGGTTGTAAACCCTTGGTGCTCTTGACTGAGTTGCTTCGGGTGGCCGAAACTTTTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "confidence": 0.81 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AB064942.1.1820_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AFTI01027729.1.1382_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea edulis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140658", "accession": "EU660786.1.875_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "EU660790.1.875_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea chilensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:397160", "accession": "EU660788.1.875_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	4.0

Ostrea chilensis in Fiji

Status

Ostrea chilensis does not have an offial status in Fiji.

Notes

No notes found.