| Occurrences: |
view occurrences
| id |
5e82b2f6-533b-4934-a090-6eb44043e75a
|
| scientificName |
Batillaria zonalis
|
| AphiaID |
397022
|
| eventDate |
2023-11-28
|
| decimalLongitude |
178.425933
|
| decimalLatitude |
-18.1293
|
| materialSampleID |
USP-24-01-89
|
| target_gene |
18S
|
| DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATACTAAAGTTGTTGCGATTAAAAAGCTCGTAGTTGGATCTCAGGCATGGGCGCACGGTCCGCCTCGCGGCGGTCACTGTGTGATTTGTTTCCCATCCTACGCTTCCCGGTTGTTCAGCCCATGGTGCTCTTGACTGAGCGTTTTGGGTGGCCGGAACGTTTACTTTGAAGAAATTAGAGT
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Batillaria zonalis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:397022",
"confidence": 0.83
},
{
"method": "VSEARCH",
"scientificName": "Zeacumantus lutulentus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:446442",
"accession": "AM932814.1.983_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Batillaria zonalis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:397022",
"accession": "AM932812.1.983_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Pyrazus ebeninus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:446439",
"accession": "AM932813.1.983_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Batillaria zonalis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:397022",
"accession": "HQ833995.1.1827_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Batillaria cumingii",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:576304",
"accession": "HQ833994.1.1817_U",
"identity": 1,
"query_cover": 0.9952
}
]
}
|
| organismQuantity |
3.0
|
| id |
0bedecc0-795d-4f5a-899a-6dc64270ad7e
|
| scientificName |
Batillaria zonalis
|
| AphiaID |
397022
|
| eventDate |
2023-11-28
|
| decimalLongitude |
178.425933
|
| decimalLatitude |
-18.1293
|
| materialSampleID |
USP-24-01-76
|
| target_gene |
18S
|
| DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATACTAAAGTTGTTGCGATTAAAAAGCTCGTAGTTGGATCTCAGGCATGGGCGCACGGTCCGCCTCGCGGCGGTCACTGTGTGATTTGTTTCCCATCCTACGCTTCCCGGTTGTTCAGCCCATGGTGCTCTTGACTGAGCGTTTTGGGTGGCCGGAACGTTTACTTTGAAGAAATTAGAGT
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Batillaria zonalis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:397022",
"confidence": 0.83
},
{
"method": "VSEARCH",
"scientificName": "Zeacumantus lutulentus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:446442",
"accession": "AM932814.1.983_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Batillaria zonalis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:397022",
"accession": "AM932812.1.983_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Pyrazus ebeninus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:446439",
"accession": "AM932813.1.983_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Batillaria zonalis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:397022",
"accession": "HQ833995.1.1827_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Batillaria cumingii",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:576304",
"accession": "HQ833994.1.1817_U",
"identity": 1,
"query_cover": 0.9952
}
]
}
|
| organismQuantity |
1.0
|
|