| Occurrences: |
view occurrences
| id |
98bf24a3-1bb2-4e87-a57f-de0f0ffd1311
|
| scientificName |
Mytiloides
|
| eventDate |
2022-02-01
|
| decimalLongitude |
178.42325
|
| decimalLatitude |
-18.13513
|
| materialSampleID |
S16
|
| target_gene |
18S
|
| DNA_sequence |
TGCTGGTTTTCGGAGCTCGAGGTAATGATTAAGAGGGACTGACGGGGGCATTCGTATTACGGTGTTAGAGGTGAAATTCTTGGATCGCCGTAAGACGAACCGCTGCGAAAGCGTTTGCCAAGAATGTTTTCATTAGTCAAGAACGAAAGTCAGAGGTTCG
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Mytiloida",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:1506984",
"confidence": 0.88
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "FJ949127.1.1708_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "FJ949125.1.1657_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "FJ949134.1.1652_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "FJ949124.1.1657_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "FJ949130.1.1680_U",
"identity": 1,
"query_cover": 0.9938
}
]
}
|
| organismQuantity |
82.0
|
| id |
0cbab7f5-051d-4af7-a1f0-6afdba8652a1
|
| scientificName |
Xenostrobus securis
|
| AphiaID |
140485
|
| eventDate |
2022-02-01
|
| decimalLongitude |
178.42325
|
| decimalLatitude |
-18.13513
|
| materialSampleID |
S16
|
| target_gene |
18S
|
| DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGTCCAGGCTGGCGGTCCGGCGCATGCCGGTTACTGCTTGTCCTGACCTACCTCCCGGTCGCGCCCTTGGTGCTCTTGATTGAGTGTCTCGGGTCGCCGGAACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGG
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "EF186010.1.874_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "FJ949127.1.1708_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "EF186014.1.874_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "EF186008.1.874_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "DQ984672.1.877_U",
"identity": 1,
"query_cover": 0.9952
}
]
}
|
| organismQuantity |
79.0
|
| id |
f9286bc3-ba8f-4611-8b93-edbf6e946080
|
| scientificName |
Xenostrobus securis
|
| AphiaID |
140485
|
| eventDate |
2022-02-01
|
| decimalLongitude |
178.42325
|
| decimalLatitude |
-18.13513
|
| materialSampleID |
S20
|
| target_gene |
18S
|
| DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGTCCAGGCTGGCGGTCCGGCGCATGCCGGTTACTGCTTGTCCTGACCTACCTCCCGGTCGCGCCCTTGGTGCTCTTGATTGAGTGTCTCGGGTCGCCGGAACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGG
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "EF186010.1.874_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "FJ949127.1.1708_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "EF186014.1.874_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "EF186008.1.874_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "DQ984672.1.877_U",
"identity": 1,
"query_cover": 0.9952
}
]
}
|
| organismQuantity |
55.0
|
| id |
8a672250-71f9-428f-91e7-c56da37a3db5
|
| scientificName |
Mytiloides
|
| eventDate |
2022-02-01
|
| decimalLongitude |
178.42325
|
| decimalLatitude |
-18.13513
|
| materialSampleID |
S20
|
| target_gene |
18S
|
| DNA_sequence |
TGCTGGTTTTCGGAGCTCGAGGTAATGATTAAGAGGGACTGACGGGGGCATTCGTATTACGGTGTTAGAGGTGAAATTCTTGGATCGCCGTAAGACGAACCGCTGCGAAAGCGTTTGCCAAGAATGTTTTCATTAGTCAAGAACGAAAGTCAGAGGTTCG
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Mytiloida",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:1506984",
"confidence": 0.88
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "FJ949127.1.1708_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "FJ949125.1.1657_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "FJ949134.1.1652_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "FJ949124.1.1657_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "FJ949130.1.1680_U",
"identity": 1,
"query_cover": 0.9938
}
]
}
|
| organismQuantity |
53.0
|
| id |
a70ac90b-fa7d-4c94-a7e7-267e938d044b
|
| scientificName |
Xenostrobus securis
|
| AphiaID |
140485
|
| eventDate |
2022-02-01
|
| decimalLongitude |
178.42325
|
| decimalLatitude |
-18.13513
|
| materialSampleID |
S19
|
| target_gene |
18S
|
| DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGTCCAGGCTGGCGGTCCGGCGCATGCCGGTTACTGCTTGTCCTGACCTACCTCCCGGTCGCGCCCTTGGTGCTCTTGATTGAGTGTCTCGGGTCGCCGGAACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGG
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "EF186010.1.874_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "FJ949127.1.1708_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "EF186014.1.874_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "EF186008.1.874_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "DQ984672.1.877_U",
"identity": 1,
"query_cover": 0.9952
}
]
}
|
| organismQuantity |
40.0
|
| id |
d386f650-2807-46e5-9746-d97f72e135ab
|
| scientificName |
Mytiloides
|
| eventDate |
2022-02-01
|
| decimalLongitude |
178.42325
|
| decimalLatitude |
-18.13513
|
| materialSampleID |
S19
|
| target_gene |
18S
|
| DNA_sequence |
TGCTGGTTTTCGGAGCTCGAGGTAATGATTAAGAGGGACTGACGGGGGCATTCGTATTACGGTGTTAGAGGTGAAATTCTTGGATCGCCGTAAGACGAACCGCTGCGAAAGCGTTTGCCAAGAATGTTTTCATTAGTCAAGAACGAAAGTCAGAGGTTCG
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Mytiloida",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:1506984",
"confidence": 0.88
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "FJ949127.1.1708_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "FJ949125.1.1657_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "FJ949134.1.1652_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "FJ949124.1.1657_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "FJ949130.1.1680_U",
"identity": 1,
"query_cover": 0.9938
}
]
}
|
| organismQuantity |
34.0
|
| id |
d2ac0468-8658-4742-82a2-ee78253361a0
|
| scientificName |
Mytiloides
|
| eventDate |
2022-02-01
|
| decimalLongitude |
178.4255
|
| decimalLatitude |
-18.13163
|
| materialSampleID |
S13
|
| target_gene |
18S
|
| DNA_sequence |
TGCTGGTTTTCGGAGCTCGAGGTAATGATTAAGAGGGACTGACGGGGGCATTCGTATTACGGTGTTAGAGGTGAAATTCTTGGATCGCCGTAAGACGAACCGCTGCGAAAGCGTTTGCCAAGAATGTTTTCATTAGTCAAGAACGAAAGTCAGAGGTTCG
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Mytiloida",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:1506984",
"confidence": 0.88
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "FJ949127.1.1708_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "FJ949125.1.1657_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "FJ949134.1.1652_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "FJ949124.1.1657_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "FJ949130.1.1680_U",
"identity": 1,
"query_cover": 0.9938
}
]
}
|
| organismQuantity |
5.0
|
| id |
e9d1ef57-a06e-4c43-bd0c-016c28b9f13e
|
| scientificName |
Xenostrobus securis
|
| AphiaID |
140485
|
| eventDate |
2022-02-01
|
| decimalLongitude |
178.4255
|
| decimalLatitude |
-18.13163
|
| materialSampleID |
S13
|
| target_gene |
18S
|
| DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGTCCAGGCTGGCGGTCCGGCGCATGCCGGTTACTGCTTGTCCTGACCTACCTCCCGGTCGCGCCCTTGGTGCTCTTGATTGAGTGTCTCGGGTCGCCGGAACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGG
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "EF186010.1.874_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "FJ949127.1.1708_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "EF186014.1.874_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "EF186008.1.874_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "DQ984672.1.877_U",
"identity": 1,
"query_cover": 0.9952
}
]
}
|
| organismQuantity |
4.0
|
| id |
1f60afbe-8da5-4ca6-a27a-a4727429583b
|
| scientificName |
Mytiloides
|
| eventDate |
2022-02-01
|
| decimalLongitude |
178.42325
|
| decimalLatitude |
-18.13513
|
| materialSampleID |
S42
|
| target_gene |
18S
|
| DNA_sequence |
TGCTGGTTTTCGGAGCTCGAGGTAATGATTAAGAGGGACTGACGGGGGCATTCGTATTACGGTGTTAGAGGTGAAATTCTTGGATCGCCGTAAGACGAACCGCTGCGAAAGCGTTTGCCAAGAATGTTTTCATTAGTCAAGAACGAAAGTCAGAGGTTCG
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Mytiloida",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:1506984",
"confidence": 0.88
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "FJ949127.1.1708_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "FJ949125.1.1657_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "FJ949134.1.1652_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "FJ949124.1.1657_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "FJ949130.1.1680_U",
"identity": 1,
"query_cover": 0.9938
}
]
}
|
| organismQuantity |
1.0
|
| id |
8f09a878-3d73-4300-a406-3ed282ab37ee
|
| scientificName |
Xenostrobus securis
|
| AphiaID |
140485
|
| eventDate |
2022-02-01
|
| decimalLongitude |
178.42325
|
| decimalLatitude |
-18.13513
|
| materialSampleID |
S42
|
| target_gene |
18S
|
| DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGTCCAGGCTGGCGGTCCGGCGCATGCCGGTTACTGCTTGTCCTGACCTACCTCCCGGTCGCGCCCTTGGTGCTCTTGATTGAGTGTCTCGGGTCGCCGGAACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGG
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "EF186010.1.874_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "FJ949127.1.1708_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "EF186014.1.874_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "EF186008.1.874_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "DQ984672.1.877_U",
"identity": 1,
"query_cover": 0.9952
}
]
}
|
| organismQuantity |
1.0
|
| id |
ec1646e4-4f54-4d55-b574-79b938188aaa
|
| scientificName |
Xenostrobus securis
|
| AphiaID |
140485
|
| eventDate |
2022-02-01
|
| decimalLongitude |
178.42325
|
| decimalLatitude |
-18.13513
|
| materialSampleID |
S15
|
| target_gene |
18S
|
| DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGTCCAGGCTGGCGGTCCGGCGCATGCCGGTTACTGCTTGTCCTGACCTACCTCCCGGTCGCGCCCTTGGTGCTCTTGATTGAGTGTCTCGGGTCGCCGGAACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGG
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "EF186010.1.874_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "FJ949127.1.1708_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "EF186014.1.874_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "EF186008.1.874_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Xenostrobus securis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:140485",
"accession": "DQ984672.1.877_U",
"identity": 1,
"query_cover": 0.9952
}
]
}
|
| organismQuantity |
1.0
|
|