PacMAN decision support system

Potential detection of Branchiosyllis exilis in Fiji

Description:

Potential detection of Branchiosyllis exilis with confidence medium on 2023-04-27 in material sample USP-24-01-05, marker 18S

Confidence:

medium

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Branchiosyllis exilis
Annelida > Polychaeta > Phyllodocida > Syllidae
WoRMS: 131279

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

1.0

Reads:

62.0

Names:

Occurrences:

view occurrences

id	2f215d26-18c1-4230-bbc7-2bec87294597
scientificName	Branchiosyllis exilis
AphiaID	131279
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-05
target_gene	18S
DNA_sequence	TGTTGGTCTTCGGAACCCGAGATAATGATTGAGAGGGACAGACGGGGGCACTTGTACTGCGGCGTGAGAGGTGAAATTCTTGGACCGTCGCAAGACAAACCCAGGCGAAAGCATTTGCCCAGAATGTTTTCATTAATCAAGAACGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Branchiosyllis exilis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131279", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Branchiosyllis_exilis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131279", "accession": "JF903583.1.1887_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	62.0

id	0d11eaa9-0bb2-4275-a53c-ce0c10dfcb6a
scientificName	Branchiosyllis exilis
AphiaID	131279
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-03
target_gene	18S
DNA_sequence	TGTTGGTCTTCGGAACCCGAGATAATGATTGAGAGGGACAGACGGGGGCACTTGTACTGCGGCGTGAGAGGTGAAATTCTTGGACCGTCGCAAGACAAACCCAGGCGAAAGCATTTGCCCAGAATGTTTTCATTAATCAAGAACGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Branchiosyllis exilis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131279", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Branchiosyllis_exilis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131279", "accession": "JF903583.1.1887_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	24.0

id	f7bb1805-ea56-4cdc-8dd6-9bdcdae339c5
scientificName	Branchiosyllis exilis
AphiaID	131279
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-03
target_gene	18S
DNA_sequence	TGTTGGTCTTCGGAAGTCGAGATAATGATTAAGAGGGACAGACGGGGGCACTCGTACTGCGGCGTGAGAGGTGAAATTCTTGGACCGTCGCAAGACGAACTACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAACGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Branchiosyllis exilis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131279", "confidence": 0.93 }, { "method": "VSEARCH", "scientificName": "Branchiosyllis_exilis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131279", "accession": "JF903584.1.1886_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Branchiosyllis_sp.", "accession": "AF474283.1.1840_U", "identity": 0.975, "query_cover": 0.9938 } ] }
organismQuantity	23.0

id	e3549864-62cf-4cbd-868d-c6812a1b2928
scientificName	Branchiosyllis exilis
AphiaID	131279
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-19
target_gene	18S
DNA_sequence	TGTTGGTCTTCGGAAGTCGAGATAATGATTAAGAGGGACAGACGGGGGCACTCGTACTGCGGCGTGAGAGGTGAAATTCTTGGACCGTCGCAAGACGAACTACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAACGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Branchiosyllis exilis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131279", "confidence": 0.93 }, { "method": "VSEARCH", "scientificName": "Branchiosyllis_exilis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131279", "accession": "JF903584.1.1886_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Branchiosyllis_sp.", "accession": "AF474283.1.1840_U", "identity": 0.975, "query_cover": 0.9938 } ] }
organismQuantity	2.0

id	ae77fc01-a1bb-4bf9-8fb2-b3c915bdcd38
scientificName	Branchiosyllis exilis
AphiaID	131279
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-08
target_gene	18S
DNA_sequence	TGTTGGTCTTCGGAAGTCGAGATAATGATTAAGAGGGACAGACGGGGGCACTCGTACTGCGGCGTGAGAGGTGAAATTCTTGGACCGTCGCAAGACGAACTACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAACGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Branchiosyllis exilis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131279", "confidence": 0.93 }, { "method": "VSEARCH", "scientificName": "Branchiosyllis_exilis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131279", "accession": "JF903584.1.1886_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Branchiosyllis_sp.", "accession": "AF474283.1.1840_U", "identity": 0.975, "query_cover": 0.9938 } ] }
organismQuantity	1.0

id	2c3c7c07-3706-4d85-9009-56d963c4c579
scientificName	Branchiosyllis exilis
AphiaID	131279
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-03
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGACGCCTTCACGTGGTCTCGCGGGCACAGGCCAAGTCCACCCGCGGTGCACTGCTGAGGGCTCCCCTCTGGCGGGGGGGTGCGCCCCTGTGCGTTGCCCTGCGAGAGCAGTCGCCGGTGCCCTTGACTGGGCCGCCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Branchiosyllis exilis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131279", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Branchiosyllis_exilis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131279", "accession": "JF903584.1.1886_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	30.0

id	b9949b92-e676-4994-8035-a0b1df7b1fa3
scientificName	Branchiosyllis exilis
AphiaID	131279
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-05
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATCTGGGGACGCCCTCTGTTGGTCCTGTGGGCAGACAGCTCCCGCAGCGCACTGCTGAGGGCTCCCAAGTGGCGGGGGGGCTCAGTGTTTCCCTCTTCACCGGGGGTGCTGTGGCCCTGCGCGAGCAGTCTCCGGTGTCATTGA
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Branchiosyllis exilis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131279", "confidence": 1 } ] }
organismQuantity	64.0

id	87e1e63c-4ee4-4d29-a8ad-bda754ab96e3
scientificName	Branchiosyllis exilis
AphiaID	131279
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-03
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATCTGGGGACGCCCTCTGTTGGTCCTGTGGGCAGACAGCTCCCGCAGCGCACTGCTGAGGGCTCCCAAGTGGCGGGGGGGCTCAGTGTTTCCCTCTTCACCGGGGGTGCTGTGGCCCTGCGCGAGCAGTCTCCGGTGTCATTGA
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Branchiosyllis exilis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131279", "confidence": 1 } ] }
organismQuantity	23.0

Branchiosyllis exilis in Fiji

Status

Branchiosyllis exilis does not have an offial status in Fiji.

Notes

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