| Occurrences: |
view occurrences
| id |
0e5bbba4-3bed-415a-8d7e-ebdee819ea33
|
| scientificName |
Amphibalanus amphitrite
|
| AphiaID |
421137
|
| eventDate |
2023-11-28
|
| decimalLongitude |
178.425933
|
| decimalLatitude |
-18.1293
|
| eventID |
SUVA3_20231128_S2A
|
| materialSampleID |
USP-24-01-169
|
| target_gene |
COI
|
| DNA_sequence |
TTTATCAAGTAACATTGCTCATTCTGGTGCTTCAGTTGACTTATCAATTTTCTCTTTACATTTAGCGGGTGCTTCGTCAATTTTAGGTGCCATTAATTTTATGTCTACAGTTATTAACATACGAGCTGAAACACTGACATTTGATCGACTTCCATTATTTGTCTGAAGAGTATTTATTACTGTAATTCTTTTACTTTTATCACTTCCAGTACTAGCAGGAGCTATTACTATGTTGCTAACAGATCGAAATCTAAATACCTCATTTTTTGATCCAACAGGAGGTGGAGATCCAATCTTATACCAACATCTATTT
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KC138445",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211364",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211365",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211375",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211378",
"identity": 1,
"query_cover": 0.9968
}
]
}
|
| organismQuantity |
27.0
|
| id |
f6408212-6b25-41e4-a794-42db2420ebb8
|
| scientificName |
Amphibalanus amphitrite
|
| AphiaID |
421137
|
| eventDate |
2023-11-28
|
| decimalLongitude |
178.425933
|
| decimalLatitude |
-18.1293
|
| eventID |
SUVA3_20231128_S2B
|
| materialSampleID |
USP-24-01-170
|
| target_gene |
COI
|
| DNA_sequence |
TTTATCAAGTAACATTGCTCATTCTGGTGCTTCAGTTGACTTATCAATTTTCTCTTTACATTTAGCGGGTGCTTCGTCAATTTTAGGTGCCATTAATTTTATGTCTACAGTTATTAACATACGAGCTGAAACACTGACATTTGATCGACTTCCATTATTTGTCTGAAGAGTATTTATTACTGTAATTCTTTTACTTTTATCACTTCCAGTACTAGCAGGAGCTATTACTATGTTGCTAACAGATCGAAATCTGAATACCTCATTTTTTGATCCAACAGGAGGTGGAGATCCAATCTTATACCAACATCTATTT
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "JQ035516",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211366",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211368",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211371",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211373",
"identity": 1,
"query_cover": 0.9968
}
]
}
|
| organismQuantity |
2.0
|
|