PacMAN decision support system

Potential detection of Callopora lineata in Fiji

Description:

Potential detection of Callopora lineata with confidence medium on 2023-11-28 in material sample USP-24-01-75, marker 18S

Confidence:

medium

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Callopora lineata
Bryozoa > Gymnolaemata > Cheilostomatida > Calloporidae
WoRMS: 111197

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

1.0

Reads:

142.0

Names:

2

Occurrences:

view occurrences

id	78d4b01c-e8f4-4371-a159-263d0aa945fe
scientificName	Callopora lineata
AphiaID	111197
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-75
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAGCAGCGTATATTTATATTGCTGCGTTTAAAAAGCTCGTAGTTGAAGCGTCAGACGCGGGAGGGCGGACGGCCGCACTGGTCGCTCTCGCCCGACCGAGCCAGGCGCAGAGGGCGCGCGTCGCTTGCACTTCACCGTGTGAGCGCGCCGCCGCTGCACGTTCACCTTGAAGAAATTGAACCGCTTAGAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Callopora lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "confidence": 0.98 }, { "method": "VSEARCH", "scientificName": "Callopora_dumerilii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111196", "accession": "FJ152025.1.2143_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Callopora_lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "accession": "JN680949.1.1836_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Callopora_lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "accession": "FJ152026.1.1903_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bryozoa_XXX_sp.", "accession": "FJ153752.1.1820_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bryozoa_XXX_sp.", "accession": "FJ486006.1.831_U", "identity": 1, "query_cover": 0.9952 } ] }
organismQuantity	142.0

id	4dc4fc94-ca61-4736-bc72-610c17db0864
scientificName	Callopora lineata
AphiaID	111197
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-78
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAGCAGCGTATATTTATATTGCTGCGTTTAAAAAGCTCGTAGTTGAAGCGTCAGACGCGGGAGGGCGGACGGCCGCACTGGTCGCTCTCGCCCGACCGAGCCAGGCGCAGAGGGCGCGCGTCGCTTGCACTTCACCGTGTGAGCGCGCCGCCGCTGCACGTTCACCTTGAAGAAATTGAACCGCTTAGAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Callopora lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "confidence": 0.98 }, { "method": "VSEARCH", "scientificName": "Callopora_dumerilii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111196", "accession": "FJ152025.1.2143_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Callopora_lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "accession": "JN680949.1.1836_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Callopora_lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "accession": "FJ152026.1.1903_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bryozoa_XXX_sp.", "accession": "FJ153752.1.1820_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bryozoa_XXX_sp.", "accession": "FJ486006.1.831_U", "identity": 1, "query_cover": 0.9952 } ] }
organismQuantity	85.0

id	8651cb83-daf7-4574-81fb-4d1f16888a29
scientificName	Callopora lineata
AphiaID	111197
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-74
target_gene	18S
DNA_sequence	GTTGGTTAGAGAGTCGGCGAGCCAATGATTAACAGGGACTGCCGGGGGCATTAGTACTCGGACGGGAGAGGTGAAATTCAAGGATCGTCCGAAGACTCCCTACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAACGAAAGTCAGAGGTGCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Callopora lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "confidence": 0.95 }, { "method": "VSEARCH", "scientificName": "Bugula_turrita", "scientificNameID": "urn:lsid:marinespecies.org:taxname:159783", "accession": "AY210443.1.1841_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Callopora_dumerilii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111196", "accession": "FJ152025.1.2143_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Bugula_plumosa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111159", "accession": "JN680951.1.1836_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Callopora_lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "accession": "JN680949.1.1836_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Bugula_fulva", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111153", "accession": "FJ152023.1.2123_U", "identity": 0.994, "query_cover": 0.9938 } ] }
organismQuantity	83.0

id	d493347c-e1f0-4e00-bae5-deeedeb79f69
scientificName	Callopora lineata
AphiaID	111197
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-73
target_gene	18S
DNA_sequence	GTTGGTTAGAGAGTCGGCGAGCCAATGATTAACAGGGACTGCCGGGGGCATTAGTACTCGGACGGGAGAGGTGAAATTCAAGGATCGTCCGAAGACTCCCTACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAACGAAAGTCAGAGGTGCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Callopora lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "confidence": 0.95 }, { "method": "VSEARCH", "scientificName": "Bugula_turrita", "scientificNameID": "urn:lsid:marinespecies.org:taxname:159783", "accession": "AY210443.1.1841_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Callopora_dumerilii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111196", "accession": "FJ152025.1.2143_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Bugula_plumosa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111159", "accession": "JN680951.1.1836_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Callopora_lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "accession": "JN680949.1.1836_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Bugula_fulva", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111153", "accession": "FJ152023.1.2123_U", "identity": 0.994, "query_cover": 0.9938 } ] }
organismQuantity	47.0

id	bc6ffb89-9d1b-4bc6-9500-1b4dee051da7
scientificName	Callopora lineata
AphiaID	111197
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-76
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAGCAGCGTATATTTATATTGCTGCGTTTAAAAAGCTCGTAGTTGAAGCGTCAGACGCGGGAGGGCGGACGGCCGCACTGGTCGCTCTCGCCCGACCGAGCCAGGCGCAGAGGGCGCGCGTCGCTTGCACTTCACCGTGTGAGCGCGCCGCCGCTGCACGTTCACCTTGAAGAAATTGAACCGCTTAGAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Callopora lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "confidence": 0.98 }, { "method": "VSEARCH", "scientificName": "Callopora_dumerilii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111196", "accession": "FJ152025.1.2143_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Callopora_lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "accession": "JN680949.1.1836_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Callopora_lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "accession": "FJ152026.1.1903_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bryozoa_XXX_sp.", "accession": "FJ153752.1.1820_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bryozoa_XXX_sp.", "accession": "FJ486006.1.831_U", "identity": 1, "query_cover": 0.9952 } ] }
organismQuantity	17.0

id	c5bc3941-f4f8-4853-aca8-64662aa6cac0
scientificName	Callopora lineata
AphiaID	111197
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-76
target_gene	18S
DNA_sequence	GTTGGTTAGAGAGTCGGCGAGCCAATGATTAACAGGGACTGCCGGGGGCATTAGTACTCGGACGGGAGAGGTGAAATTCAAGGATCGTCCGAAGACTCCCTACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAACGAAAGTCAGAGGTGCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Callopora lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "confidence": 0.95 }, { "method": "VSEARCH", "scientificName": "Bugula_turrita", "scientificNameID": "urn:lsid:marinespecies.org:taxname:159783", "accession": "AY210443.1.1841_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Callopora_dumerilii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111196", "accession": "FJ152025.1.2143_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Bugula_plumosa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111159", "accession": "JN680951.1.1836_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Callopora_lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "accession": "JN680949.1.1836_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Bugula_fulva", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111153", "accession": "FJ152023.1.2123_U", "identity": 0.994, "query_cover": 0.9938 } ] }
organismQuantity	17.0

id	8690b84b-7c19-44b4-b021-42630f92e8da
scientificName	Callopora lineata
AphiaID	111197
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-78
target_gene	18S
DNA_sequence	GTTGGTTAGAGAGTCGGCGAGCCAATGATTAACAGGGACTGCCGGGGGCATTAGTACTCGGACGGGAGAGGTGAAATTCAAGGATCGTCCGAAGACTCCCTACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAACGAAAGTCAGAGGTGCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Callopora lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "confidence": 0.95 }, { "method": "VSEARCH", "scientificName": "Bugula_turrita", "scientificNameID": "urn:lsid:marinespecies.org:taxname:159783", "accession": "AY210443.1.1841_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Callopora_dumerilii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111196", "accession": "FJ152025.1.2143_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Bugula_plumosa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111159", "accession": "JN680951.1.1836_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Callopora_lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "accession": "JN680949.1.1836_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Bugula_fulva", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111153", "accession": "FJ152023.1.2123_U", "identity": 0.994, "query_cover": 0.9938 } ] }
organismQuantity	15.0

id	d872ba9b-c802-4fc4-8077-59f57578cf78
scientificName	Callopora lineata
AphiaID	111197
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-74
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAGCAGCGTATATTTATATTGCTGCGTTTAAAAAGCTCGTAGTTGAAGCGTCAGACGCGGGAGGGCGGACGGCCGCACTGGTCGCTCTCGCCCGACCGAGCCAGGCGCAGAGGGCGCGCGTCGCTTGCACTTCACCGTGTGAGCGCGCCGCCGCTGCACGTTCACCTTGAAGAAATTGAACCGCTTAGAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Callopora lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "confidence": 0.98 }, { "method": "VSEARCH", "scientificName": "Callopora_dumerilii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111196", "accession": "FJ152025.1.2143_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Callopora_lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "accession": "JN680949.1.1836_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Callopora_lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "accession": "FJ152026.1.1903_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bryozoa_XXX_sp.", "accession": "FJ153752.1.1820_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bryozoa_XXX_sp.", "accession": "FJ486006.1.831_U", "identity": 1, "query_cover": 0.9952 } ] }
organismQuantity	4.0

id	0ec1a16c-13de-4e4e-a7e3-b2628b06b00e
scientificName	Callopora lineata
AphiaID	111197
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-67
target_gene	18S
DNA_sequence	GTTGGTTAGAGAGTCGGCGAGCCAATGATTAACAGGGACTGCCGGGGGCATTAGTACTCGGACGGGAGAGGTGAAATTCAAGGATCGTCCGAAGACTCCCTACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAACGAAAGTCAGAGGTGCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Callopora lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "confidence": 0.95 }, { "method": "VSEARCH", "scientificName": "Bugula_turrita", "scientificNameID": "urn:lsid:marinespecies.org:taxname:159783", "accession": "AY210443.1.1841_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Callopora_dumerilii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111196", "accession": "FJ152025.1.2143_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Bugula_plumosa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111159", "accession": "JN680951.1.1836_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Callopora_lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "accession": "JN680949.1.1836_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Bugula_fulva", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111153", "accession": "FJ152023.1.2123_U", "identity": 0.994, "query_cover": 0.9938 } ] }
organismQuantity	2.0

id	8641dd2e-ffe8-4477-8e89-4037deb07948
scientificName	Callopora lineata
AphiaID	111197
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-68
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAGCAGCGTATATTTATATTGCTGCGTTTAAAAAGCTCGTAGTTGAAGCGTCAGACGCGGGAGGGCGGACGGCCGCACTGGTCGCTCTCGCCCGACCGAGCCAGGCGCAGAGGGCGCGCGTCGCTTGCACTTCACCGTGTGAGCGCGCCGCCGCTGCACGTTCACCTTGAAGAAATTGAACCGCTTAGAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Callopora lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "confidence": 0.98 }, { "method": "VSEARCH", "scientificName": "Callopora_dumerilii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111196", "accession": "FJ152025.1.2143_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Callopora_lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "accession": "JN680949.1.1836_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Callopora_lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "accession": "FJ152026.1.1903_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bryozoa_XXX_sp.", "accession": "FJ153752.1.1820_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bryozoa_XXX_sp.", "accession": "FJ486006.1.831_U", "identity": 1, "query_cover": 0.9952 } ] }
organismQuantity	1.0

id	9614ad2e-f877-4f48-becb-168756b7f029
scientificName	Callopora lineata
AphiaID	111197
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-69
target_gene	18S
DNA_sequence	GTTGGTTAGAGAGTCGGCGAGCCAATGATTAACAGGGACTGCCGGGGGCATTAGTACTCGGACGGGAGAGGTGAAATTCAAGGATCGTCCGAAGACTCCCTACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAACGAAAGTCAGAGGTGCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Callopora lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "confidence": 0.95 }, { "method": "VSEARCH", "scientificName": "Bugula_turrita", "scientificNameID": "urn:lsid:marinespecies.org:taxname:159783", "accession": "AY210443.1.1841_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Callopora_dumerilii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111196", "accession": "FJ152025.1.2143_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Bugula_plumosa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111159", "accession": "JN680951.1.1836_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Callopora_lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "accession": "JN680949.1.1836_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Bugula_fulva", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111153", "accession": "FJ152023.1.2123_U", "identity": 0.994, "query_cover": 0.9938 } ] }
organismQuantity	1.0

id	7edccf70-1fbf-4810-9b8b-361519297a65
scientificName	Callopora lineata
AphiaID	111197
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-73
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAGCAGCGTATATTTATATTGCTGCGTTTAAAAAGCTCGTAGTTGAAGCGTCAGACGCGGGAGGGCGGACGGCCGCACTGGTCGCTCTCGCCCGACCGAGCCAGGCGCAGAGGGCGCGCGTCGCTTGCACTTTGCCGTGTGAGCGCGCCGCCGCTGCACGTTCACCTTGAAGAAATTGAACCGCTTAGAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Callopora lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "confidence": 0.84 }, { "method": "VSEARCH", "scientificName": "Cryptosula_pallasiana", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111343", "accession": "FJ196129.1.1578_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Cryptosula_pallasiana", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111343", "accession": "JN680940.1.1832_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bugula_turrita", "scientificNameID": "urn:lsid:marinespecies.org:taxname:159783", "accession": "AY210443.1.1841_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bugula_fulva", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111153", "accession": "FJ152023.1.2123_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Callopora_dumerilii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111196", "accession": "FJ152025.1.2143_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	18.0

id	b7d8dc3a-01af-4b36-badf-ed0b5efeb2ae
scientificName	Callopora lineata
AphiaID	111197
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-75
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAGCAGCGTATATTTATATTGCTGCGTTTAAAAAGCTCGTAGTTGAAGCGTCAGACGCGGGAGGGCGGACGGCCGCACTGGTCGCTCTCGCCCGACCGAGCCAGGCGCAGAGGGCGCGCGTCGCTTGCACTTTGCCGTGTGAGCGCGCCGCCGCTGCACGTTCACCTTGAAGAAATTGAACCGCTTAGAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Callopora lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "confidence": 0.84 }, { "method": "VSEARCH", "scientificName": "Cryptosula_pallasiana", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111343", "accession": "FJ196129.1.1578_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Cryptosula_pallasiana", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111343", "accession": "JN680940.1.1832_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bugula_turrita", "scientificNameID": "urn:lsid:marinespecies.org:taxname:159783", "accession": "AY210443.1.1841_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bugula_fulva", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111153", "accession": "FJ152023.1.2123_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Callopora_dumerilii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111196", "accession": "FJ152025.1.2143_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	13.0

id	2a1e164a-5239-4ac0-8eb5-45d4cee1bf50
scientificName	Callopora lineata
AphiaID	111197
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-78
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAGCAGCGTATATTTATATTGCTGCGTTTAAAAAGCTCGTAGTTGAAGCGTCAGACGCGGGAGGGCGGACGGCCGCACTGGTCGCTCTCGCCCGACCGAGCCAGGCGCAGAGGGCGCGCGTCGCTTGCACTTTGCCGTGTGAGCGCGCCGCCGCTGCACGTTCACCTTGAAGAAATTGAACCGCTTAGAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Callopora lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "confidence": 0.84 }, { "method": "VSEARCH", "scientificName": "Cryptosula_pallasiana", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111343", "accession": "FJ196129.1.1578_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Cryptosula_pallasiana", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111343", "accession": "JN680940.1.1832_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bugula_turrita", "scientificNameID": "urn:lsid:marinespecies.org:taxname:159783", "accession": "AY210443.1.1841_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bugula_fulva", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111153", "accession": "FJ152023.1.2123_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Callopora_dumerilii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111196", "accession": "FJ152025.1.2143_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	1.0

id	3d3aa06e-81a8-4209-8100-f002cb2ec7e4
scientificName	Callopora lineata
AphiaID	111197
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-74
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAGCAGCGTATATTTATATTGCTGCGTTTAAAAAGCTCGTAGTTGAAGCGTCAGACGCGGGAGGGCGGACGGCCGCACTGGTCGCTCTCGCCCGACCGAGCCAGGCGCAGAGGGCGCGCGTCGCTTGCACTTTGCCGTGTGAGCGCGCCGCCGCTGCACGTTCACCTTGAAGAAATTGAACCGCTTAGAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Callopora lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "confidence": 0.84 }, { "method": "VSEARCH", "scientificName": "Cryptosula_pallasiana", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111343", "accession": "FJ196129.1.1578_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Cryptosula_pallasiana", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111343", "accession": "JN680940.1.1832_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bugula_turrita", "scientificNameID": "urn:lsid:marinespecies.org:taxname:159783", "accession": "AY210443.1.1841_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bugula_fulva", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111153", "accession": "FJ152023.1.2123_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Callopora_dumerilii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111196", "accession": "FJ152025.1.2143_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	1.0

Callopora lineata in Fiji

Status

Callopora lineata does not have an offial status in Fiji.

Notes

No notes found.