Occurrences: |
view occurrences
id |
75541b1a-2252-49c5-a5da-4adca39ef13f
|
scientificName |
Isognomon
|
eventDate |
2022-02-01
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
materialSampleID |
S18
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGTCCAGGCTTGCGGTCCGCTCCTTGGCGGTCACTGCTCGATCCTGACCTACCTCACCGGTTTTTGCCCTTGGTGCTCTTGACTGAGTGTCTCGGGTGGCCGGAACGTTTACTTTGAAAAAATTAGAGTGCTCAAAGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
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"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
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},
{
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},
{
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},
{
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},
{
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},
{
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}
]
}
|
organismQuantity |
55.0
|
id |
fda2d928-f928-47a8-9799-1c5dc27c34e7
|
scientificName |
Isognomon
|
eventDate |
2022-02-01
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
materialSampleID |
S17
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGTCCAGGCTTGCGGTCCGCTCCTTGGCGGTCACTGCTCGATCCTGACCTACCTCACCGGTTTTTGCCCTTGGTGCTCTTGACTGAGTGTCTCGGGTGGCCGGAACGTTTACTTTGAAAAAATTAGAGTGCTCAAAGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
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"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
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},
{
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},
{
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},
{
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},
{
"method": "VSEARCH",
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},
{
"method": "VSEARCH",
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}
]
}
|
organismQuantity |
46.0
|
id |
9197a78a-bb3b-4dff-9667-e16e89a9f3c5
|
scientificName |
Isognomon
|
eventDate |
2022-02-01
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
S16
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGTCCAGGCTTGCGGTCCGCTCCTTGGCGGTCACTGCTCGATCCTGACCTACCTCACCGGTTTTTGCCCTTGGTGCTCTTGACTGAGTGTCTCGGGTGGCCGGAACGTTTACTTTGAAAAAATTAGAGTGCTCAAAGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
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"scientificName": "Isognomon",
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},
{
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},
{
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{
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},
{
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},
{
"method": "VSEARCH",
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"accession": "HQ329335.1.1773_U",
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}
]
}
|
organismQuantity |
41.0
|
id |
0ec25d16-08ce-43d6-b73d-c84d5c5ca814
|
scientificName |
Isognomon
|
eventDate |
2022-02-01
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
materialSampleID |
S14
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGTCCAGGCTTGCGGTCCGCTCCTTGGCGGTCACTGCTCGATCCTGACCTACCTCACCGGTTTTTGCCCTTGGTGCTCTTGACTGAGTGTCTCGGGTGGCCGGAACGTTTACTTTGAAAAAATTAGAGTGCTCAAAGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
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"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
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{
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},
{
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},
{
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{
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{
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{
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]
}
|
organismQuantity |
13.0
|
id |
e7644420-f031-4af6-a06e-606ca6393e65
|
scientificName |
Isognomon
|
eventDate |
2022-02-01
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
S20
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGTCCAGGCTTGCGGTCCGCTCCTTGGCGGTCACTGCTCGATCCTGACCTACCTCACCGGTTTTTGCCCTTGGTGCTCTTGACTGAGTGTCTCGGGTGGCCGGAACGTTTACTTTGAAAAAATTAGAGTGCTCAAAGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
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"vsearch_cover_threshold": 0.97,
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{
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},
{
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{
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{
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},
{
"method": "VSEARCH",
"scientificName": "Isognomon ephippium",
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"accession": "HQ329335.1.1773_U",
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}
]
}
|
organismQuantity |
5.0
|
id |
23001edb-9843-452f-9c4f-e82c39c6bfad
|
scientificName |
Isognomon
|
eventDate |
2022-02-01
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
S19
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGTCCAGGCTTGCGGTCCGCTCCTTGGCGGTCACTGCTCGATCCTGACCTACCTCACCGGTTTTTGCCCTTGGTGCTCTTGACTGAGTGTCTCGGGTGGCCGGAACGTTTACTTTGAAAAAATTAGAGTGCTCAAAGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
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"vsearch_cover_threshold": 0.97,
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{
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{
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{
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{
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]
}
|
organismQuantity |
4.0
|
id |
799c6ba8-79ed-4402-be51-9862969b0bf8
|
scientificName |
Isognomon
|
eventDate |
2022-02-01
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
S15
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGTCCAGGCTTGCGGTCCGCTCCTTGGCGGTCACTGCTCGATCCTGACCTACCTCACCGGTTTTTGCCCTTGGTGCTCTTGACTGAGTGTCTCGGGTGGCCGGAACGTTTACTTTGAAAAAATTAGAGTGCTCAAAGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
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"confidence": 0.99
},
{
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},
{
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},
{
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{
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{
"method": "VSEARCH",
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}
]
}
|
organismQuantity |
4.0
|
id |
3a0d7b2a-a2dd-4cf0-b909-e668b6503ad5
|
scientificName |
Isognomon
|
eventDate |
2022-02-01
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
S42
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGTCCAGGCTTGCGGTCCGCTCCTTGGCGGTCACTGCTCGATCCTGACCTACCTCACCGGTTTTTGCCCTTGGTGCTCTTGACTGAGTGTCTCGGGTGGCCGGAACGTTTACTTTGAAAAAATTAGAGTGCTCAAAGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
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"scientificName": "Isognomon",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:138091",
"confidence": 0.99
},
{
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"identity": 1,
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},
{
"method": "VSEARCH",
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},
{
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{
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{
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}
]
}
|
organismQuantity |
2.0
|
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