PacMAN decision support system

Potential detection of Magallana gigas in Fiji

Description:

Potential detection of Magallana gigas with confidence low on 2022-05-25 in material sample S63, marker 18S

Confidence:

low

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Magallana gigas
Mollusca > Bivalvia > Ostreida > Ostreidae
WoRMS: 836033

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

Reads:

995.0

Names:

4

Occurrences:

view occurrences

id	20fe4a72-2619-4e15-bb45-43121a169355
scientificName	Magallana gigas
AphiaID	836033
eventDate	2022-05-25
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S63
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGCTGGATCTCGGGTCCAGGCTGGCGGTCCGCCTCGTTGCGGTCACTGCTTGTCCTGACCCAACCTCTCGGTTGTAAACCCTTGGTGCTCTTGACTGAGTTGCTTCGGGTGGCCGAAACTTTTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "confidence": 0.81 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AB064942.1.1820_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AFTI01027729.1.1382_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea edulis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140658", "accession": "EU660786.1.875_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "EU660790.1.875_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea chilensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:397160", "accession": "EU660788.1.875_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	995.0

id	0eeb5717-fbdd-4296-ba99-c61addc37b96
scientificName	Magallana gigas
AphiaID	836033
eventDate	2022-05-25
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S65
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGCTGGATCTCGGGTCCAGGCTGGCGGTCCGCCTCGTTGCGGTCACTGCTTGTCCTGACCCAACCTCTCGGTTGTAAACCCTTGGTGCTCTTGACTGAGTTGCTTCGGGTGGCCGAAACTTTTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "confidence": 0.81 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AB064942.1.1820_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AFTI01027729.1.1382_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea edulis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140658", "accession": "EU660786.1.875_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "EU660790.1.875_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea chilensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:397160", "accession": "EU660788.1.875_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	712.0

id	7b3cdc86-b281-4092-b63c-dffa817b5a17
scientificName	Magallana gigas
AphiaID	836033
eventDate	2022-05-25
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S63
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGCTGGATCTCGGGTCCAGGCTGGCGGTCCGCCTCGTTGCGGTCACTGCCTGTCCTGACCCAACCTCTCGGTTGTAAACCCTTGGTGCTCTTGACTGAGTTGCTTCGGGTGGCCGAAACTTTTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "confidence": 0.8 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AB064942.1.1820_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AFTI01027729.1.1382_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea edulis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140658", "accession": "EU660786.1.875_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "EU660790.1.875_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea chilensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:397160", "accession": "EU660788.1.875_U", "identity": 0.995, "query_cover": 0.9952 } ] }
organismQuantity	121.0

id	7f778098-c4f6-4236-8a9d-67cca8a82d91
scientificName	Magallana gigas
AphiaID	836033
eventDate	2022-05-25
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S65
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGCTGGATCTCGGGTCCAGGCTGGCGGTCCGCCTCGTTGCGGTCACTGCCTGTCCTGACCCAACCTCTCGGTTGTAAACCCTTGGTGCTCTTGACTGAGTTGCTTCGGGTGGCCGAAACTTTTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "confidence": 0.8 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AB064942.1.1820_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AFTI01027729.1.1382_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea edulis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140658", "accession": "EU660786.1.875_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "EU660790.1.875_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea chilensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:397160", "accession": "EU660788.1.875_U", "identity": 0.995, "query_cover": 0.9952 } ] }
organismQuantity	35.0

id	40823377-f062-465b-b10a-d9cc635cbf2b
scientificName	Magallana gigas
AphiaID	836033
eventDate	2022-05-25
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S45
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGCTGGATCTCGGGTCCAGGCTGGCGGTCCGCCTCGTTGCGGTCACTGCTTGTCCTGACCCAACCTCTCGGTTGTAAACCCTTGGTGCTCTTGACTGAGTTGCTTCGGGTGGCCGAAACTTTTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "confidence": 0.81 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AB064942.1.1820_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AFTI01027729.1.1382_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea edulis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140658", "accession": "EU660786.1.875_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "EU660790.1.875_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea chilensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:397160", "accession": "EU660788.1.875_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	7.0

id	92aebd5a-561f-4b52-a9a8-b2c7d678394d
scientificName	Magallana gigas
AphiaID	836033
eventDate	2022-05-25
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S46
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGCTGGATCTCGGGTCCAGGCTGGCGGTCCGCCTCGTTGCGGTCACTGCCTGTCCTGACCCAACCTCTCGGTTGTAAACCCTTGGTGCTCTTGACTGAGTTGCTTCGGGTGGCCGAAACTTTTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "confidence": 0.8 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AB064942.1.1820_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AFTI01027729.1.1382_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea edulis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140658", "accession": "EU660786.1.875_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "EU660790.1.875_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea chilensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:397160", "accession": "EU660788.1.875_U", "identity": 0.995, "query_cover": 0.9952 } ] }
organismQuantity	3.0

id	faf073ad-8053-498c-b520-d2084765f7c1
scientificName	Magallana gigas
AphiaID	836033
eventDate	2022-05-25
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S46
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGCTGGATCTCGGGTCCAGGCTGGCGGTCCGCCTCGTTGCGGTCACTGCTTGTCCTGACCCAACCTCTCGGTTGTAAACCCTTGGTGCTCTTGACTGAGTTGCTTCGGGTGGCCGAAACTTTTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "confidence": 0.81 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AB064942.1.1820_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AFTI01027729.1.1382_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea edulis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140658", "accession": "EU660786.1.875_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "EU660790.1.875_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea chilensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:397160", "accession": "EU660788.1.875_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	3.0

id	596a2df5-bd15-4b2c-ba33-4f357225ed5a
scientificName	Magallana gigas
AphiaID	836033
eventDate	2022-05-25
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S45
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGCTGGATCTCGGGTCCAGGCTGGCGGTCCGCCTCGTTGCGGTCACTGCCTGTCCTGACCCAACCTCTCGGTTGTAAACCCTTGGTGCTCTTGACTGAGTTGCTTCGGGTGGCCGAAACTTTTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "confidence": 0.8 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AB064942.1.1820_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AFTI01027729.1.1382_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea edulis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140658", "accession": "EU660786.1.875_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "EU660790.1.875_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea chilensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:397160", "accession": "EU660788.1.875_U", "identity": 0.995, "query_cover": 0.9952 } ] }
organismQuantity	2.0

id	6cd1383e-2cbd-43b3-8488-b743dcdc13ed
scientificName	Magallana gigas
AphiaID	836033
eventDate	2022-05-25
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S48
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGCTGGATCTCGGGTCCAGGCTGGCGGTCCGCCTCGTTGCGGTCACTGCTTGTCCTGACCCAACCTCTCGGTTGTAAACCCTTGGTGCTCTTGACTGAGTTGCTTCGGGTGGCCGAAACTTTTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "confidence": 0.81 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AB064942.1.1820_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "AFTI01027729.1.1382_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea edulis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140658", "accession": "EU660786.1.875_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Crassostrea gigas", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140656", "accession": "EU660790.1.875_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ostrea chilensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:397160", "accession": "EU660788.1.875_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	1.0

Magallana gigas in Fiji

Status

Magallana gigas does not have an offial status in Fiji.

Notes

No notes found.