PacMAN decision support system

Potential detection of Hydroides minax in Fiji

Description:

Potential detection of Hydroides minax with confidence low on 2024-02-28 in material sample USP-24-01-201, marker 18S

Confidence:

low

Risk:

medium view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Hydroides minax
Annelida > Polychaeta > Sabellida > Serpulidae
WoRMS: 131007

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

1.0

Reads:

25.0

Names:

4

Occurrences:

view occurrences

id	a0956bb2-5875-4218-aa87-1e3c7f10055d
scientificName	Serpula vermicularis
AphiaID	131051
eventDate	2024-02-28
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-201
target_gene	18S
DNA_sequence	CCGTTGGTCTCTGTGACTGGTGTAATGATTAAGAGGGACTGCCGGGGGCATTGGTATGGCGGGGTTAGAGGTGAAATTCTTGGATCCTCGCCAGACCAACAAAAGCGAAAGCATTTGCCAAGAATGTCTTCATTAATCAAGAACGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Serpula vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Serpula_columbiana", "scientificNameID": "urn:lsid:marinespecies.org:taxname:338088", "accession": "DQ317127.1.1715_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydroides_minax", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131007", "accession": "EU184063.1.1735_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Serpula_vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "accession": "AY395721.1.1715_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydroides_tuberculatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:328479", "accession": "EU184059.1.1740_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Serpula_vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "accession": "DQ140409.1.1708_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	25.0

id	86508cfd-f982-4467-ba6b-0f9309b1f3f0
scientificName	Serpula vermicularis
AphiaID	131051
eventDate	2024-02-28
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-202
target_gene	18S
DNA_sequence	CCGTTGGTCTCTGTGACTGGTGTAATGATTAAGAGGGACTGCCGGGGGCATTGGTATGGCGGGGTTAGAGGTGAAATTCTTGGATCCTCGCCAGACCAACAAAAGCGAAAGCATTTGCCAAGAATGTCTTCATTAATCAAGAACGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Serpula vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Serpula_columbiana", "scientificNameID": "urn:lsid:marinespecies.org:taxname:338088", "accession": "DQ317127.1.1715_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydroides_minax", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131007", "accession": "EU184063.1.1735_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Serpula_vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "accession": "AY395721.1.1715_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydroides_tuberculatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:328479", "accession": "EU184059.1.1740_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Serpula_vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "accession": "DQ140409.1.1708_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	18.0

id	130c4d3a-7791-420a-8fb5-6642e425d651
scientificName	Serpula vermicularis
AphiaID	131051
eventDate	2024-02-28
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-200
target_gene	18S
DNA_sequence	CCGTTGGTCTCTGTGACTGGTGTAATGATTAAGAGGGACTGCCGGGGGCATTGGTATGGCGGGGTTAGAGGTGAAATTCTTGGATCCTCGCCAGACCAACAAAAGCGAAAGCATTTGCCAAGAATGTCTTCATTAATCAAGAACGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Serpula vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Serpula_columbiana", "scientificNameID": "urn:lsid:marinespecies.org:taxname:338088", "accession": "DQ317127.1.1715_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydroides_minax", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131007", "accession": "EU184063.1.1735_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Serpula_vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "accession": "AY395721.1.1715_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydroides_tuberculatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:328479", "accession": "EU184059.1.1740_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Serpula_vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "accession": "DQ140409.1.1708_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	5.0

id	0f2e9cb6-b28a-4002-a97f-d6ce0a94ec5b
scientificName	Serpula vermicularis
AphiaID	131051
eventDate	2024-02-28
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-197
target_gene	18S
DNA_sequence	CCGTTGGTCTCTGTGACTGGTGTAATGATTAAGAGGGACTGCCGGGGGCATTGGTATGGCGGGGTTAGAGGTGAAATTCTTGGATCCTCGCCAGACCAACAAAAGCGAAAGCATTTGCCAAGAATGTCTTCATTAATCAAGAACGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Serpula vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Serpula_columbiana", "scientificNameID": "urn:lsid:marinespecies.org:taxname:338088", "accession": "DQ317127.1.1715_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydroides_minax", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131007", "accession": "EU184063.1.1735_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Serpula_vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "accession": "AY395721.1.1715_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydroides_tuberculatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:328479", "accession": "EU184059.1.1740_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Serpula_vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "accession": "DQ140409.1.1708_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	4.0

id	5327cca8-3992-4831-9ef2-6353e504618c
scientificName	Hydroides
eventDate	2024-02-28
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-201
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGTATCGTCTCGGTGGTCCTGTTCACGCAGGCACTGCCTTGATGACCTAACCGATGGTTGAACGACTCCGAGTGCCCTTCACTGGGTGCTCGTGGGTGGCCATCGCGTTTACTGTGAAAAAATTAGAGTGTTCAAAGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Hydroides", "scientificNameID": "urn:lsid:marinespecies.org:taxname:129566", "confidence": 0.83 }, { "method": "VSEARCH", "scientificName": "Hydroides_ezoensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131003", "accession": "EU184062.1.1745_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_minax", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131007", "accession": "EU184063.1.1735_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_tuberculatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:328479", "accession": "EU184059.1.1740_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_trivesiculosus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:328477", "accession": "EU184060.1.1723_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_sanctaecrucis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:333645", "accession": "EU184061.1.1774_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	26.0

id	a999b6a0-f401-47c7-9bd0-273d51a44a80
scientificName	Hydroides
eventDate	2024-02-28
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-202
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGTATCGTCTCGGTGGTCCTGTTCACGCAGGCACTGCCTTGATGACCTAACCGATGGTTGAACGACTCCGAGTGCCCTTCACTGGGTGCTCGTGGGTGGCCATCGCGTTTACTGTGAAAAAATTAGAGTGTTCAAAGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Hydroides", "scientificNameID": "urn:lsid:marinespecies.org:taxname:129566", "confidence": 0.83 }, { "method": "VSEARCH", "scientificName": "Hydroides_ezoensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131003", "accession": "EU184062.1.1745_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_minax", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131007", "accession": "EU184063.1.1735_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_tuberculatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:328479", "accession": "EU184059.1.1740_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_trivesiculosus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:328477", "accession": "EU184060.1.1723_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_sanctaecrucis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:333645", "accession": "EU184061.1.1774_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	17.0

id	60f4323e-bb3a-4564-aad5-d52ce92f4df2
scientificName	Hydroides
eventDate	2024-02-28
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-200
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGTATCGTCTCGGTGGTCCTGTTCACGCAGGCACTGCCTTGATGACCTAACCGATGGTTGAACGACTCCGAGTGCCCTTCACTGGGTGCTCGTGGGTGGCCATCGCGTTTACTGTGAAAAAATTAGAGTGTTCAAAGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Hydroides", "scientificNameID": "urn:lsid:marinespecies.org:taxname:129566", "confidence": 0.83 }, { "method": "VSEARCH", "scientificName": "Hydroides_ezoensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131003", "accession": "EU184062.1.1745_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_minax", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131007", "accession": "EU184063.1.1735_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_tuberculatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:328479", "accession": "EU184059.1.1740_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_trivesiculosus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:328477", "accession": "EU184060.1.1723_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_sanctaecrucis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:333645", "accession": "EU184061.1.1774_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	6.0

id	6c313847-ff4b-4c57-bd83-c1e092233b82
scientificName	Hydroides
eventDate	2024-02-28
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-197
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGTATCGTCTCGGTGGTCCTGTTCACGCAGGCACTGCCTTGATGACCTAACCGATGGTTGAACGACTCCGAGTGCCCTTCACTGGGTGCTCGTGGGTGGCCATCGCGTTTACTGTGAAAAAATTAGAGTGTTCAAAGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Hydroides", "scientificNameID": "urn:lsid:marinespecies.org:taxname:129566", "confidence": 0.83 }, { "method": "VSEARCH", "scientificName": "Hydroides_ezoensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131003", "accession": "EU184062.1.1745_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_minax", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131007", "accession": "EU184063.1.1735_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_tuberculatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:328479", "accession": "EU184059.1.1740_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_trivesiculosus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:328477", "accession": "EU184060.1.1723_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_sanctaecrucis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:333645", "accession": "EU184061.1.1774_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	3.0

Hydroides minax in Fiji

Status

Hydroides minax does not have an offial status in Fiji.

Notes

No notes found.