PacMAN decision support system

Potential detection of Chaetoceros decipiens in Fiji

Description:

Potential detection of Chaetoceros decipiens with confidence low on 2021-12-07 in material sample S28, marker 18S

Confidence:

low

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Chaetoceros decipiens
Heterokontophyta > Bacillariophyceae > Chaetocerotanae incertae sedis > Chaetocerotaceae
WoRMS: 149126

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

1.0

Reads:

2.0

Names:

Occurrences:

view occurrences

id	1eee8c2c-4fcd-4f5f-bad4-dbaf8577d395
scientificName	Chaetoceros
eventDate	2021-12-07
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S28
target_gene	18S
DNA_sequence	TTTGTTGGTTTGCGCACCGTGGTAATGATGAATAGGGACAGTTGTGGGTATTCGTATTCACTTGTAAGAGGTGAAATTCTTAGATTAAGGGAAGACGAACTACTGCGAAAGCATTTACCAAGGATGTTTTCATTAATCAAGAACGAAAGTGTGGGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Chaetoceros", "scientificNameID": "urn:lsid:marinespecies.org:taxname:148985", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Chaetoceros decipiens", "scientificNameID": "urn:lsid:marinespecies.org:taxname:149126", "accession": "DQ455710.1.1310_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Chaetoceros mitra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:148986", "accession": "KX611427.1.1596_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Chaetoceros laevisporus", "accession": "KX611428.1.1564_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Chaetoceros laevisporus", "accession": "KX611429.1.1461_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Chaetoceros laevisporus", "accession": "KX611430.1.1512_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	2.0

id	79704f65-3b8a-4f68-bfc6-e0688712d277
scientificName	Chaetoceros
eventDate	2021-12-07
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S32
target_gene	18S
DNA_sequence	TTTGTTGGTTTGCGCACCGTGGTAATGATGAATAGGGACAGTTGTGGGTATTCGTATTCACTTGTAAGAGGTGAAATTCTTAGATTAAGGGAAGACGAACTACTGCGAAAGCATTTACCAAGGATGTTTTCATTAATCAAGAACGAAAGTGTGGGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Chaetoceros", "scientificNameID": "urn:lsid:marinespecies.org:taxname:148985", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Chaetoceros decipiens", "scientificNameID": "urn:lsid:marinespecies.org:taxname:149126", "accession": "DQ455710.1.1310_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Chaetoceros mitra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:148986", "accession": "KX611427.1.1596_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Chaetoceros laevisporus", "accession": "KX611428.1.1564_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Chaetoceros laevisporus", "accession": "KX611429.1.1461_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Chaetoceros laevisporus", "accession": "KX611430.1.1512_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	2.0

id	0f39c654-fffa-44a8-b338-2d08234bfc03
scientificName	Chaetoceros
eventDate	2021-12-07
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S33
target_gene	18S
DNA_sequence	TTTGTTGGTTTGCGCACCGTGGTAATGATGAATAGGGACAGTTGTGGGTATTCGTATTCACTTGTAAGAGGTGAAATTCTTAGATTAAGGGAAGACGAACTACTGCGAAAGCATTTACCAAGGATGTTTTCATTAATCAAGAACGAAAGTGTGGGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Chaetoceros", "scientificNameID": "urn:lsid:marinespecies.org:taxname:148985", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Chaetoceros decipiens", "scientificNameID": "urn:lsid:marinespecies.org:taxname:149126", "accession": "DQ455710.1.1310_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Chaetoceros mitra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:148986", "accession": "KX611427.1.1596_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Chaetoceros laevisporus", "accession": "KX611428.1.1564_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Chaetoceros laevisporus", "accession": "KX611429.1.1461_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Chaetoceros laevisporus", "accession": "KX611430.1.1512_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	1.0

id	f268257a-8844-45a8-9fae-b5a72dd5517d
scientificName	Chaetoceros
eventDate	2021-12-07
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S29
target_gene	18S
DNA_sequence	TTTGTTGGTTTGCGCACCGTGGTAATGATGAATAGGGACAGTTGTGGGTATTCGTATTCACTTGTAAGAGGTGAAATTCTTAGATTAAGGGAAGACGAACTACTGCGAAAGCATTTACCAAGGATGTTTTCATTAATCAAGAACGAAAGTGTGGGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Chaetoceros", "scientificNameID": "urn:lsid:marinespecies.org:taxname:148985", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Chaetoceros decipiens", "scientificNameID": "urn:lsid:marinespecies.org:taxname:149126", "accession": "DQ455710.1.1310_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Chaetoceros mitra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:148986", "accession": "KX611427.1.1596_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Chaetoceros laevisporus", "accession": "KX611428.1.1564_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Chaetoceros laevisporus", "accession": "KX611429.1.1461_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Chaetoceros laevisporus", "accession": "KX611430.1.1512_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	1.0

id	61bc2a93-2680-4093-9db1-b6a1a7873681
scientificName	Chaetoceros decipiens
AphiaID	149126
eventDate	2021-12-07
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S55
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTTAGTTGTTGCAGTTAAAAAGCTCGTAGTTGAATTTCTGGTGGGAGAATGCAGTCCAACCTTAGGGTTGGTACTCGCACTCTCCGGCCATCCTTGGGTGGAGCCTGTCTGGCATTAAGTTGTCGGGCAGGGGATACCCATCGTTTACTGTGAAAAAATTAGAGTGTTCAAAGCAGG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Chaetoceros decipiens", "scientificNameID": "urn:lsid:marinespecies.org:taxname:149126", "confidence": 0.96 }, { "method": "VSEARCH", "scientificName": "Chaetoceros decipiens", "scientificNameID": "urn:lsid:marinespecies.org:taxname:149126", "accession": "DQ455710.1.1310_U", "identity": 0.995, "query_cover": 0.9952 } ] }
organismQuantity	1.0

Chaetoceros decipiens in Fiji

Status

Chaetoceros decipiens does not have an offial status in Fiji.

Notes

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