PacMAN decision support system

Potential detection of Ostrea stentina in Fiji

Description:

Potential detection of Ostrea stentina with confidence medium on 2022-02-01 in material sample S105, marker COI

Confidence:

medium

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Ostrea stentina
Mollusca > Bivalvia > Ostreida > Ostreidae
WoRMS: 489077

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

0.997

Reads:

95.0

Names:

2

Occurrences:

view occurrences

id	2afb1522-7f30-4ee6-968b-2db6cfe556ff
scientificName	Ostrea equestris
AphiaID	156924
eventDate	2022-02-01
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S105
target_gene	COI
DNA_sequence	TTTGTCAACTTTTTCGTACCATGGAATGTGTATAGACTTGGCAATTCTAAGGCTTCATTTAGCCGGGATTAGTTCAATTTTTAGATCAATTAATTTTATGGTCACAATTACAAATATGCGATCAGTAGACGGACATTTACTGGCTTTATTTCCGTGATCAATTAAAGTAACATCATTTTTATTATTGACCACTCTGCCTGTACTAGCCGGAGGCTTAACTATACTACTTACAGATCGTCATTTTAATACATCTTTCTTTGATCCTGTAGGCGGTGGAGATCCTGTATTATTTCAGCATTTGTTC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ostrea equestris", "scientificNameID": "urn:lsid:marinespecies.org:taxname:156924", "confidence": 0.99 }, { "method": "VSEARCH", "scientificName": "Ostrea equestris", "scientificNameID": "urn:lsid:marinespecies.org:taxname:156924", "accession": "KT317498", "identity": 0.997, "query_cover": 0.9967 }, { "method": "VSEARCH", "scientificName": "Ostrea stentina", "scientificNameID": "urn:lsid:marinespecies.org:taxname:489077", "accession": "DQ226522", "identity": 0.997, "query_cover": 0.9967 }, { "method": "VSEARCH", "scientificName": "Ostrea stentina", "scientificNameID": "urn:lsid:marinespecies.org:taxname:489077", "accession": "DQ226523", "identity": 0.997, "query_cover": 0.9967 }, { "method": "VSEARCH", "scientificName": "Ostrea stentina", "scientificNameID": "urn:lsid:marinespecies.org:taxname:489077", "accession": "DQ640081", "identity": 0.997, "query_cover": 0.9967 }, { "method": "VSEARCH", "scientificName": "Ostrea stentina", "scientificNameID": "urn:lsid:marinespecies.org:taxname:489077", "accession": "DQ640082", "identity": 0.997, "query_cover": 0.9967 } ] }
organismQuantity	95.0

id	c2fc869d-ba12-477d-b473-d5889886bc2e
scientificName	Ostrea equestris
AphiaID	156924
eventDate	2022-02-01
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S97
target_gene	COI
DNA_sequence	TTTGTCAACTTTTTCGTACCATGGAATGTGTATAGACTTGGCAATTCTAAGGCTTCATTTAGCCGGGATTAGTTCAATTTTTAGATCAATTAATTTTATGGTCACAATTACAAATATGCGATCAGTAGACGGACATTTACTGGCTTTATTTCCGTGATCAATTAAAGTAACATCATTTTTATTATTGACCACTCTGCCTGTACTAGCCGGAGGCTTAACTATACTACTTACAGATCGTCATTTTAATACATCTTTCTTTGATCCTGTAGGCGGTGGAGATCCTGTATTATTTCAGCATTTGTTC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ostrea equestris", "scientificNameID": "urn:lsid:marinespecies.org:taxname:156924", "confidence": 0.99 }, { "method": "VSEARCH", "scientificName": "Ostrea equestris", "scientificNameID": "urn:lsid:marinespecies.org:taxname:156924", "accession": "KT317498", "identity": 0.997, "query_cover": 0.9967 }, { "method": "VSEARCH", "scientificName": "Ostrea stentina", "scientificNameID": "urn:lsid:marinespecies.org:taxname:489077", "accession": "DQ226522", "identity": 0.997, "query_cover": 0.9967 }, { "method": "VSEARCH", "scientificName": "Ostrea stentina", "scientificNameID": "urn:lsid:marinespecies.org:taxname:489077", "accession": "DQ226523", "identity": 0.997, "query_cover": 0.9967 }, { "method": "VSEARCH", "scientificName": "Ostrea stentina", "scientificNameID": "urn:lsid:marinespecies.org:taxname:489077", "accession": "DQ640081", "identity": 0.997, "query_cover": 0.9967 }, { "method": "VSEARCH", "scientificName": "Ostrea stentina", "scientificNameID": "urn:lsid:marinespecies.org:taxname:489077", "accession": "DQ640082", "identity": 0.997, "query_cover": 0.9967 } ] }
organismQuantity	22.0

id	624f4a0f-2013-42e9-8ab7-f7c180635498
scientificName	Ostrea equestris
AphiaID	156924
eventDate	2022-02-01
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S106
target_gene	COI
DNA_sequence	TTTGTCAACTTTTTCGTACCATGGAATGTGTATAGACTTGGCAATTCTAAGGCTTCATTTAGCCGGGATTAGTTCAATTTTTAGATCAATTAATTTTATGGTCACAATTACAAATATGCGATCAGTAGACGGACATTTACTGGCTTTATTTCCGTGATCAATTAAAGTAACATCATTTTTATTATTGACCACTCTGCCTGTACTAGCCGGAGGCTTAACTATACTACTTACAGATCGTCATTTTAATACATCTTTCTTTGATCCTGTAGGCGGTGGAGATCCTGTATTATTTCAGCATTTGTTC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ostrea equestris", "scientificNameID": "urn:lsid:marinespecies.org:taxname:156924", "confidence": 0.99 }, { "method": "VSEARCH", "scientificName": "Ostrea equestris", "scientificNameID": "urn:lsid:marinespecies.org:taxname:156924", "accession": "KT317498", "identity": 0.997, "query_cover": 0.9967 }, { "method": "VSEARCH", "scientificName": "Ostrea stentina", "scientificNameID": "urn:lsid:marinespecies.org:taxname:489077", "accession": "DQ226522", "identity": 0.997, "query_cover": 0.9967 }, { "method": "VSEARCH", "scientificName": "Ostrea stentina", "scientificNameID": "urn:lsid:marinespecies.org:taxname:489077", "accession": "DQ226523", "identity": 0.997, "query_cover": 0.9967 }, { "method": "VSEARCH", "scientificName": "Ostrea stentina", "scientificNameID": "urn:lsid:marinespecies.org:taxname:489077", "accession": "DQ640081", "identity": 0.997, "query_cover": 0.9967 }, { "method": "VSEARCH", "scientificName": "Ostrea stentina", "scientificNameID": "urn:lsid:marinespecies.org:taxname:489077", "accession": "DQ640082", "identity": 0.997, "query_cover": 0.9967 } ] }
organismQuantity	10.0

id	0f3c9362-1a4c-4852-993e-007a777a79d3
scientificName	Ostrea equestris
AphiaID	156924
eventDate	2022-02-01
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S103
target_gene	COI
DNA_sequence	TTTGTCAACTTTTTCGTACCATGGAATGTGTATAGACTTGGCAATTCTAAGGCTTCATTTAGCCGGGATTAGTTCAATTTTTAGATCAATTAATTTTATGGTCACAATTACAAATATGCGATCAGTAGACGGACATTTACTGGCTTTATTTCCGTGATCAATTAAAGTAACATCATTTTTATTATTGACCACTCTGCCTGTACTAGCCGGAGGCTTAACTATACTACTTACAGATCGTCATTTTAATACATCTTTCTTTGATCCTGTAGGCGGTGGAGATCCTGTATTATTTCAGCATTTGTTC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ostrea equestris", "scientificNameID": "urn:lsid:marinespecies.org:taxname:156924", "confidence": 0.99 }, { "method": "VSEARCH", "scientificName": "Ostrea equestris", "scientificNameID": "urn:lsid:marinespecies.org:taxname:156924", "accession": "KT317498", "identity": 0.997, "query_cover": 0.9967 }, { "method": "VSEARCH", "scientificName": "Ostrea stentina", "scientificNameID": "urn:lsid:marinespecies.org:taxname:489077", "accession": "DQ226522", "identity": 0.997, "query_cover": 0.9967 }, { "method": "VSEARCH", "scientificName": "Ostrea stentina", "scientificNameID": "urn:lsid:marinespecies.org:taxname:489077", "accession": "DQ226523", "identity": 0.997, "query_cover": 0.9967 }, { "method": "VSEARCH", "scientificName": "Ostrea stentina", "scientificNameID": "urn:lsid:marinespecies.org:taxname:489077", "accession": "DQ640081", "identity": 0.997, "query_cover": 0.9967 }, { "method": "VSEARCH", "scientificName": "Ostrea stentina", "scientificNameID": "urn:lsid:marinespecies.org:taxname:489077", "accession": "DQ640082", "identity": 0.997, "query_cover": 0.9967 } ] }
organismQuantity	7.0

id	91738ffa-c13f-4e14-a52f-19439b7e5b5d
scientificName	Ostrea equestris
AphiaID	156924
eventDate	2022-02-01
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S108
target_gene	COI
DNA_sequence	TTTGTCAACTTTTTCGTACCATGGAATGTGTATAGACTTGGCAATTCTAAGGCTTCATTTAGCCGGGATTAGTTCAATTTTTAGATCAATTAATTTTATGGTCACAATTACAAATATGCGATCAGTAGACGGACATTTACTGGCTTTATTTCCGTGATCAATTAAAGTAACATCATTTTTATTATTGACCACTCTGCCTGTACTAGCCGGAGGCTTAACTATACTACTTACAGATCGTCATTTTAATACATCTTTCTTTGATCCTGTAGGCGGTGGAGATCCTGTATTATTTCAGCATTTGTTC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ostrea equestris", "scientificNameID": "urn:lsid:marinespecies.org:taxname:156924", "confidence": 0.99 }, { "method": "VSEARCH", "scientificName": "Ostrea equestris", "scientificNameID": "urn:lsid:marinespecies.org:taxname:156924", "accession": "KT317498", "identity": 0.997, "query_cover": 0.9967 }, { "method": "VSEARCH", "scientificName": "Ostrea stentina", "scientificNameID": "urn:lsid:marinespecies.org:taxname:489077", "accession": "DQ226522", "identity": 0.997, "query_cover": 0.9967 }, { "method": "VSEARCH", "scientificName": "Ostrea stentina", "scientificNameID": "urn:lsid:marinespecies.org:taxname:489077", "accession": "DQ226523", "identity": 0.997, "query_cover": 0.9967 }, { "method": "VSEARCH", "scientificName": "Ostrea stentina", "scientificNameID": "urn:lsid:marinespecies.org:taxname:489077", "accession": "DQ640081", "identity": 0.997, "query_cover": 0.9967 }, { "method": "VSEARCH", "scientificName": "Ostrea stentina", "scientificNameID": "urn:lsid:marinespecies.org:taxname:489077", "accession": "DQ640082", "identity": 0.997, "query_cover": 0.9967 } ] }
organismQuantity	5.0

id	28b63189-0047-47d0-859a-15f680498053
scientificName	Ostrea equestris
AphiaID	156924
eventDate	2022-02-01
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S107
target_gene	COI
DNA_sequence	TTTGTCAACTTTTTCGTACCATGGAATGTGTATAGACTTGGCAATTCTAAGGCTTCATTTAGCCGGGATTAGTTCAATTTTTAGATCAATTAATTTTATGGTCACAATTACAAATATGCGATCAGTAGACGGACATTTACTGGCTTTATTTCCGTGATCAATTAAAGTAACATCATTTTTATTATTGACCACTCTGCCTGTACTAGCCGGAGGCTTAACTATACTACTTACAGATCGTCATTTTAATACATCTTTCTTTGATCCTGTAGGCGGTGGAGATCCTGTATTATTTCAGCATTTGTTC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ostrea equestris", "scientificNameID": "urn:lsid:marinespecies.org:taxname:156924", "confidence": 0.99 }, { "method": "VSEARCH", "scientificName": "Ostrea equestris", "scientificNameID": "urn:lsid:marinespecies.org:taxname:156924", "accession": "KT317498", "identity": 0.997, "query_cover": 0.9967 }, { "method": "VSEARCH", "scientificName": "Ostrea stentina", "scientificNameID": "urn:lsid:marinespecies.org:taxname:489077", "accession": "DQ226522", "identity": 0.997, "query_cover": 0.9967 }, { "method": "VSEARCH", "scientificName": "Ostrea stentina", "scientificNameID": "urn:lsid:marinespecies.org:taxname:489077", "accession": "DQ226523", "identity": 0.997, "query_cover": 0.9967 }, { "method": "VSEARCH", "scientificName": "Ostrea stentina", "scientificNameID": "urn:lsid:marinespecies.org:taxname:489077", "accession": "DQ640081", "identity": 0.997, "query_cover": 0.9967 }, { "method": "VSEARCH", "scientificName": "Ostrea stentina", "scientificNameID": "urn:lsid:marinespecies.org:taxname:489077", "accession": "DQ640082", "identity": 0.997, "query_cover": 0.9967 } ] }
organismQuantity	2.0

id	94e40564-6a2d-4223-a976-9000aaf9b5a2
scientificName	Ostrea equestris
AphiaID	156924
eventDate	2022-02-01
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S100
target_gene	COI
DNA_sequence	TTTGTCAACTTTTTCGTACCATGGAATGTGTATAGACTTGGCAATTCTAAGGCTTCATTTAGCCGGGATTAGTTCAATTTTTAGATCAATTAATTTTATGGTCACAATTACAAATATGCGATCAGTAGACGGACATTTACTGGCTTTATTTCCGTGATCAATTAAAGTAACATCATTTTTATTATTGACCACTCTGCCTGTACTAGCCGGAGGCTTAACTATACTACTTACAGATCGTCATTTTAATACATCTTTCTTTGATCCTGTAGGCGGTGGAGATCCTGTATTATTTCAGCATTTGTTC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ostrea equestris", "scientificNameID": "urn:lsid:marinespecies.org:taxname:156924", "confidence": 0.99 }, { "method": "VSEARCH", "scientificName": "Ostrea equestris", "scientificNameID": "urn:lsid:marinespecies.org:taxname:156924", "accession": "KT317498", "identity": 0.997, "query_cover": 0.9967 }, { "method": "VSEARCH", "scientificName": "Ostrea stentina", "scientificNameID": "urn:lsid:marinespecies.org:taxname:489077", "accession": "DQ226522", "identity": 0.997, "query_cover": 0.9967 }, { "method": "VSEARCH", "scientificName": "Ostrea stentina", "scientificNameID": "urn:lsid:marinespecies.org:taxname:489077", "accession": "DQ226523", "identity": 0.997, "query_cover": 0.9967 }, { "method": "VSEARCH", "scientificName": "Ostrea stentina", "scientificNameID": "urn:lsid:marinespecies.org:taxname:489077", "accession": "DQ640081", "identity": 0.997, "query_cover": 0.9967 }, { "method": "VSEARCH", "scientificName": "Ostrea stentina", "scientificNameID": "urn:lsid:marinespecies.org:taxname:489077", "accession": "DQ640082", "identity": 0.997, "query_cover": 0.9967 } ] }
organismQuantity	1.0

Ostrea stentina in Fiji

Status

Ostrea stentina does not have an offial status in Fiji.

Notes

No notes found.