| Occurrences: |
view occurrences
| id |
0f6e2b01-844b-4679-886d-f40dd8beb48a
|
| scientificName |
Dorvillea similis
|
| AphiaID |
332770
|
| eventDate |
2023-08-24
|
| decimalLongitude |
178.4255
|
| decimalLatitude |
-18.13163
|
| materialSampleID |
USP-24-01-64
|
| target_gene |
18S
|
| DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATACCAAAGCTGTTGCAGTTAAAAAGCTCGTAGCTGGGTCTCGGGTTTTCACGGGTACGGCGGTCCACCTCGCGGTGGGTTCAACTGCTTTGCTCGGCCCGCCTTCTCGGTCTCCTCGCGATGCTCTTGAGTGAGTCGTTGCGAGAGGGTCGGGACGTTTACTTTGAAGAAATTAGAGTGT
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dorvillea similis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:332770",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Dorvillea_similis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:332770",
"accession": "AF412803.1.1891_U",
"identity": 1,
"query_cover": 0.9952
}
]
}
|
| organismQuantity |
177.0
|
| id |
fee4a849-cf2e-43e8-9bd8-56e76bc15a2e
|
| scientificName |
Dorvillea similis
|
| AphiaID |
332770
|
| eventDate |
2023-08-24
|
| decimalLongitude |
178.4255
|
| decimalLatitude |
-18.13163
|
| materialSampleID |
USP-24-01-64
|
| target_gene |
18S
|
| DNA_sequence |
CGTTGGTTTTCGGAGCTCGGGGTAATGACTGATAGGGACAGCCGGGGACATCCGTATTGCGGCGCTAGAGGTGAAATTCTTGGACCGTCGCAAGACGAACGGCAGCGAAAGCGTTTGTCAAGAACGTTTTCATTGGTCAAGAGCGATAGTCAGAGGTTCG
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dorvillea similis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:332770",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Dorvillea_similis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:332770",
"accession": "AF412803.1.1891_U",
"identity": 1,
"query_cover": 0.9938
}
]
}
|
| organismQuantity |
168.0
|
|