PacMAN decision support system

Potential detection of Diplosoma simile in Fiji

Description:

Potential detection of Diplosoma simile with confidence low on 2023-11-28 in material sample USP-24-01-73, marker 18S

Confidence:

low

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Diplosoma simile
Chordata > Ascidiacea > Aplousobranchia > Didemnidae
WoRMS: 250415

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

1.0

Reads:

630.0

Names:

5

Occurrences:

view occurrences

id	0f807fe6-3afe-46b9-91f3-e23317598763
scientificName	Diplosoma
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-73
target_gene	18S
DNA_sequence	GGCCCCGAGATTTATTGCGCGGCAATGATTGAGAGGGACGGACGGGGGCATTCGTACTGCGCCGGGAGAGGTGAAATTCGCGGATCGGCGCAAGACGAACCGAAGCGAAGGCGTCTGCCAAGGACGTTTTCCTTGATCAAGAGCGAGAGTCGGAGGCTCC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Diplosoma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103457", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211103.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211106.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211107.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_ooru", "scientificNameID": "urn:lsid:marinespecies.org:taxname:266061", "accession": "AB211098.1.2081_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211108.1.2075_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	630.0

id	112e426c-0c3b-4d66-b16b-19a373357cd1
scientificName	Diplosoma
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-77
target_gene	18S
DNA_sequence	GGCCCCGAGATTTATTGCGCGGCAATGATTGAGAGGGACGGACGGGGGCATTCGTACTGCGCCGGGAGAGGTGAAATTCGCGGATCGGCGCAAGACGAACCGAAGCGAAGGCGTCTGCCAAGGACGTTTTCCTTGATCAAGAGCGAGAGTCGGAGGCTCC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Diplosoma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103457", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211103.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211106.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211107.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_ooru", "scientificNameID": "urn:lsid:marinespecies.org:taxname:266061", "accession": "AB211098.1.2081_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211108.1.2075_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	72.0

id	848c9f47-c264-4417-afa8-ba7f0fd24ade
scientificName	Diplosoma
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-74
target_gene	18S
DNA_sequence	GGCCCCGAGATTTATTGCGCGGCAATGATTGAGAGGGACGGACGGGGGCATTCGTACTGCGCCGGGAGAGGTGAAATTCGCGGATCGGCGCAAGACGAACCGAAGCGAAGGCGTCTGCCAAGGACGTTTTCCTTGATCAAGAGCGAGAGTCGGAGGCTCC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Diplosoma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103457", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211103.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211106.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211107.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_ooru", "scientificNameID": "urn:lsid:marinespecies.org:taxname:266061", "accession": "AB211098.1.2081_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211108.1.2075_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	65.0

id	b600be44-6cc0-4de8-adb2-97510c6db501
scientificName	Diplosoma
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-78
target_gene	18S
DNA_sequence	GGCCCCGAGATTTATTGCGCGGCAATGATTGAGAGGGACGGACGGGGGCATTCGTACTGCGCCGGGAGAGGTGAAATTCGCGGATCGGCGCAAGACGAACCGAAGCGAAGGCGTCTGCCAAGGACGTTTTCCTTGATCAAGAGCGAGAGTCGGAGGCTCC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Diplosoma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103457", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211103.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211106.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211107.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_ooru", "scientificNameID": "urn:lsid:marinespecies.org:taxname:266061", "accession": "AB211098.1.2081_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211108.1.2075_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	50.0

id	f47e4497-a4a3-4948-80b8-77bc35fd90c5
scientificName	Diplosoma
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-76
target_gene	18S
DNA_sequence	GGCCCCGAGATTTATTGCGCGGCAATGATTGAGAGGGACGGACGGGGGCATTCGTACTGCGCCGGGAGAGGTGAAATTCGCGGATCGGCGCAAGACGAACCGAAGCGAAGGCGTCTGCCAAGGACGTTTTCCTTGATCAAGAGCGAGAGTCGGAGGCTCC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Diplosoma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103457", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211103.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211106.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211107.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_ooru", "scientificNameID": "urn:lsid:marinespecies.org:taxname:266061", "accession": "AB211098.1.2081_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211108.1.2075_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	24.0

id	4671ca50-877d-4411-8315-cc962771e148
scientificName	Diplosoma
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-75
target_gene	18S
DNA_sequence	GGCCCCGAGATTTATTGCGCGGCAATGATTGAGAGGGACGGACGGGGGCATTCGTACTGCGCCGGGAGAGGTGAAATTCGCGGATCGGCGCAAGACGAACCGAAGCGAAGGCGTCTGCCAAGGACGTTTTCCTTGATCAAGAGCGAGAGTCGGAGGCTCC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Diplosoma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103457", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211103.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211106.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211107.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_ooru", "scientificNameID": "urn:lsid:marinespecies.org:taxname:266061", "accession": "AB211098.1.2081_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211108.1.2075_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	21.0

id	d6f62755-93a3-4638-b218-58b7f0044826
scientificName	Diplosoma
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-67
target_gene	18S
DNA_sequence	GGCCCCGAGATTTATTGCGCGGCAATGATTGAGAGGGACGGACGGGGGCATTCGTACTGCGCCGGGAGAGGTGAAATTCGCGGATCGGCGCAAGACGAACCGAAGCGAAGGCGTCTGCCAAGGACGTTTTCCTTGATCAAGAGCGAGAGTCGGAGGCTCC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Diplosoma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103457", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211103.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211106.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211107.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_ooru", "scientificNameID": "urn:lsid:marinespecies.org:taxname:266061", "accession": "AB211098.1.2081_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211108.1.2075_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	7.0

id	c504d5ef-1d70-4c3e-8c09-0846e31b6b90
scientificName	Diplosoma
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-69
target_gene	18S
DNA_sequence	GGCCCCGAGATTTATTGCGCGGCAATGATTGAGAGGGACGGACGGGGGCATTCGTACTGCGCCGGGAGAGGTGAAATTCGCGGATCGGCGCAAGACGAACCGAAGCGAAGGCGTCTGCCAAGGACGTTTTCCTTGATCAAGAGCGAGAGTCGGAGGCTCC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Diplosoma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103457", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211103.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211106.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211107.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_ooru", "scientificNameID": "urn:lsid:marinespecies.org:taxname:266061", "accession": "AB211098.1.2081_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211108.1.2075_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	6.0

id	808d4f1c-bccf-4899-886d-dc3d8bf0f248
scientificName	Diplosoma
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-68
target_gene	18S
DNA_sequence	GGCCCCGAGATTTATTGCGCGGCAATGATTGAGAGGGACGGACGGGGGCATTCGTACTGCGCCGGGAGAGGTGAAATTCGCGGATCGGCGCAAGACGAACCGAAGCGAAGGCGTCTGCCAAGGACGTTTTCCTTGATCAAGAGCGAGAGTCGGAGGCTCC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Diplosoma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103457", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211103.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211106.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211107.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_ooru", "scientificNameID": "urn:lsid:marinespecies.org:taxname:266061", "accession": "AB211098.1.2081_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211108.1.2075_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	2.0

Diplosoma simile in Fiji

Status

Diplosoma simile does not have an offial status in Fiji.

Notes

No notes found.