PacMAN decision support system

Potential detection of Bougainvillia muscus in Fiji

Description:

Potential detection of Bougainvillia muscus with confidence medium on 2021-12-07 in material sample S32, marker 18S

Confidence:

medium

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Bougainvillia muscus
Cnidaria > Hydrozoa > Anthoathecata > Bougainvilliidae
WoRMS: 117328

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

1.0

Reads:

14.0

Names:

Occurrences:

view occurrences

id	82f83335-80af-4c39-90ed-013cf2aa7372
scientificName	Bougainvillia
eventDate	2021-12-07
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S32
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTCGGGACGGGCCAGTTGGTCCGCCGCAAGGTGTGTACTGACTGGTCTGTTCTTCTTCGCAAAGACTGCGTGTGCTCTTTATTGAGTGTGCGTAGGATTTACGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Bougainvillia sp.", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Bougainvillia_muscus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117328", "accession": "FJ550582.1.1663_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bougainvillia_sp.", "accession": "AF358093.1.1820_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bougainvillia_sp.", "accession": "KF962203.1.1680_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bougainvillia_sp.", "accession": "KF962204.1.1680_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bougainvillia_sp.", "accession": "KF962205.1.1680_U", "identity": 1, "query_cover": 0.9952 } ] }
organismQuantity	14.0

id	0fdd4b36-7d75-4cd3-bba1-d5fa30a10f54
scientificName	Bougainvillia
eventDate	2021-12-07
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S55
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTCGGGACGGGCCAGTTGGTCCGCCGCAAGGTGTGTACTGACTGGTCTGTTCTTCTTCGCAAAGACTGCGTGTGCTCTTTATTGAGTGTGCGTAGGATTTACGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Bougainvillia sp.", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Bougainvillia_muscus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117328", "accession": "FJ550582.1.1663_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bougainvillia_sp.", "accession": "AF358093.1.1820_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bougainvillia_sp.", "accession": "KF962203.1.1680_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bougainvillia_sp.", "accession": "KF962204.1.1680_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bougainvillia_sp.", "accession": "KF962205.1.1680_U", "identity": 1, "query_cover": 0.9952 } ] }
organismQuantity	1.0

id	9afb6d0b-13b3-4ee3-9e45-9dba50cab151
scientificName	Bougainvillia
eventDate	2021-12-07
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S53
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTCGGGACGGGCCAGTTGGTCCGCCGCAAGGTGTGTACTGACTGGTCTGTTCTTCTTCGCAAAGACTGCGTGTGCTCTTTATTGAGTGTGCGTAGGATTTACGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Bougainvillia sp.", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Bougainvillia_muscus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117328", "accession": "FJ550582.1.1663_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bougainvillia_sp.", "accession": "AF358093.1.1820_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bougainvillia_sp.", "accession": "KF962203.1.1680_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bougainvillia_sp.", "accession": "KF962204.1.1680_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bougainvillia_sp.", "accession": "KF962205.1.1680_U", "identity": 1, "query_cover": 0.9952 } ] }
organismQuantity	1.0

id	9f64f430-931d-4cc6-ae61-716c5dafe4f1
scientificName	Bougainvillia
eventDate	2021-12-07
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S30
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTCGGGACGGGCCAGTTGGTCCGCCGCAAGGTGTGTACTGACTGGTCTGTTCTTCTTCGCAAAGACTGCGTGTGCTCTTTATTGAGTGTGCGTAGGATTTACGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Bougainvillia sp.", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Bougainvillia_muscus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117328", "accession": "FJ550582.1.1663_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bougainvillia_sp.", "accession": "AF358093.1.1820_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bougainvillia_sp.", "accession": "KF962203.1.1680_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bougainvillia_sp.", "accession": "KF962204.1.1680_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bougainvillia_sp.", "accession": "KF962205.1.1680_U", "identity": 1, "query_cover": 0.9952 } ] }
organismQuantity	1.0

Bougainvillia muscus does not have an offial status in Fiji.

No notes found.