PacMAN decision support system

Potential detection of Styela canopus in Fiji

Description:

Potential detection of Styela canopus with confidence medium on 2023-08-15 in material sample USP-24-01-153, marker COI

Confidence:

medium

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Styela canopus
Chordata > Ascidiacea > Stolidobranchia > Styelidae
WoRMS: 103926

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

0.997

Reads:

50.0

Names:

Occurrences:

view occurrences

id	4580a201-dfe7-4b2f-af4e-4292e7f9e68a
scientificName	Microcosmus curvus
AphiaID	250843
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
eventID	SUVA3_20230815_S3A
materialSampleID	USP-24-01-153
target_gene	COI
DNA_sequence	TTTAGCCGGTAATTTAGCCCACTCAAGAAGAGCTCTTGATTGTGCAATTTTTTCATTACATTTGGCCAGAATTTCCAGCATTTTAGGATCATTAAATTTTATGACAACAATATTTAATATAAAAACTAAAAGATGGGTTATATTTTCCATGCCTTTGTTTTGTTGAACTGTATTAGTAACTACTTTGTTGCTTTTACTTAGTCTTCCTGTTTTAGCTGCAGCTATTACTATATTACTTTTTGACCGAAATTTAAATACTTCATTTTTTGATCCTGTTAGAGGGAGAGATCCTGTTTTATATCAACACTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Microcosmus curvus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250843", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Microcosmus curvus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250843", "accession": "KT693194", "identity": 1, "query_cover": 0.9968 }, { "method": "VSEARCH", "scientificName": "Styela canopus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103926", "accession": "MW278578", "identity": 0.997, "query_cover": 0.9968 } ] }
organismQuantity	50.0

id	8cd3adbb-6495-43a8-9fd2-ccc6dd37428d
scientificName	Microcosmus curvus
AphiaID	250843
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
eventID	SUVA3_20230815_S2A
materialSampleID	USP-24-01-150
target_gene	COI
DNA_sequence	TTTAGCCGGTAATTTAGCCCACTCAAGAAGAGCTCTTGATTGTGCAATTTTTTCATTACATTTGGCCAGAATTTCCAGCATTTTAGGATCATTAAATTTTATGACAACAATATTTAATATAAAAACTAAAAGATGGGTTATATTTTCCATGCCTTTGTTTTGTTGAACTGTATTAGTAACTACTTTGTTGCTTTTACTTAGTCTTCCTGTTTTAGCTGCAGCTATTACTATATTACTTTTTGACCGAAATTTAAATACTTCATTTTTTGATCCTGTTAGAGGGAGAGATCCTGTTTTATATCAACACTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Microcosmus curvus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250843", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Microcosmus curvus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250843", "accession": "KT693194", "identity": 1, "query_cover": 0.9968 }, { "method": "VSEARCH", "scientificName": "Styela canopus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103926", "accession": "MW278578", "identity": 0.997, "query_cover": 0.9968 } ] }
organismQuantity	45.0

id	1029d462-b07c-458d-830d-fb5e36a560eb
scientificName	Microcosmus curvus
AphiaID	250843
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
eventID	SUVA3_20230815_S3C
materialSampleID	USP-24-01-155
target_gene	COI
DNA_sequence	TTTAGCCGGTAATTTAGCCCACTCAAGAAGAGCTCTTGATTGTGCAATTTTTTCATTACATTTGGCCAGAATTTCCAGCATTTTAGGATCATTAAATTTTATGACAACAATATTTAATATAAAAACTAAAAGATGGGTTATATTTTCCATGCCTTTGTTTTGTTGAACTGTATTAGTAACTACTTTGTTGCTTTTACTTAGTCTTCCTGTTTTAGCTGCAGCTATTACTATATTACTTTTTGACCGAAATTTAAATACTTCATTTTTTGATCCTGTTAGAGGGAGAGATCCTGTTTTATATCAACACTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Microcosmus curvus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250843", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Microcosmus curvus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250843", "accession": "KT693194", "identity": 1, "query_cover": 0.9968 }, { "method": "VSEARCH", "scientificName": "Styela canopus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103926", "accession": "MW278578", "identity": 0.997, "query_cover": 0.9968 } ] }
organismQuantity	2.0

id	5f49a47f-4f9d-4552-9e66-ab4521c2e955
scientificName	Microcosmus curvus
AphiaID	250843
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
eventID	SUVA3_20230815_S3B
materialSampleID	USP-24-01-154
target_gene	COI
DNA_sequence	TTTAGCCGGCAATTTAGCCCACTCAAGAAGAGCTCTTGATTGTGCAATTTTTTCATTGCATTTGGCCAGAATTTCCAGCATTTTAGGATCATTAAATTTTATGACAACAATATTTAATATAAAAACTAAAAGATGGGTTATATTTTCCATGCCTTTGTTTTGTTGAACTGTATTAGTAACTACTTTGTTGCTTTTACTTAGTCTTCCTGTTTTAGCTGCAGCTATTACTATATTACTTTTTGACCGAAATTTAAATACTTCATTTTTTGATCCTGTTAGAGGAAGAGATCCTGTTTTATATCAACACTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Microcosmus curvus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250843", "confidence": 0.99 }, { "method": "VSEARCH", "scientificName": "Styela canopus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103926", "accession": "MW278578", "identity": 0.994, "query_cover": 0.9968 }, { "method": "VSEARCH", "scientificName": "Microcosmus curvus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250843", "accession": "KT693194", "identity": 0.993, "query_cover": 0.9968 } ] }
organismQuantity	23.0

id	23bf9ee4-45ef-47c5-991e-6235c1f1a652
scientificName	Microcosmus curvus
AphiaID	250843
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
eventID	SUVA3_20230815_S3A
materialSampleID	USP-24-01-153
target_gene	COI
DNA_sequence	TTTAGCCGGTAATTTAGCCCACTCAAGAAGAGCTCTTGATTGTGCAATTTTTTCATTACATTTGGCCAGAATTTCCAGCATTTTAGGATCATTAAATTTTATGACAACAATATTTAATATAAAAACTAAAAGATGGGTTATATTTTCCATGCCTTTGTTTTGTTGAACTGTATTAGTAACTACTTTGTTGCTTTTACTTAGTCTTCCTGTTTTAGCTGCAGCTATTACTATATTACTTTTTGACCGAAATTTAAATACTTCATTTTTTGATCCTGTTAGAGGAAGAGATCCTGTTTTATATCAACACTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Microcosmus curvus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250843", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Microcosmus curvus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250843", "accession": "KT693194", "identity": 1, "query_cover": 0.9968 }, { "method": "VSEARCH", "scientificName": "Styela canopus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103926", "accession": "MW278578", "identity": 0.994, "query_cover": 0.9968 } ] }
organismQuantity	1.0

id	efdb81d8-8883-41a4-ac99-93607b941ba2
scientificName	Microcosmus curvus
AphiaID	250843
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
eventID	SUVA3_20230815_S3A
materialSampleID	USP-24-01-153
target_gene	COI
DNA_sequence	TTTAGCCGGCAATTTAGCCCACTCAAGAAGAGCTCTTGATTGTGCAATTTTTTCATTGCATTTGGCCAGAATTTCCAGCATTTTAGGATCATTAAATTTTATGACAACAATATTTAATATAAAAACTAAAAGATGGGTTATATTTTCCATGCCTTTGTTTTGTTGAACTGTATTAGTAACTACTTTGTTGCTTTTACTTAGTCTTCCTGTTTTAGCTGCAGCTATTACTATATTACTTTTTGACCGAAATTTAAATACTTCATTTTTTGATCCTGTTAGAGGAAGAGATCCTGTTTTATATCAACACTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Microcosmus curvus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250843", "confidence": 0.99 }, { "method": "VSEARCH", "scientificName": "Styela canopus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103926", "accession": "MW278578", "identity": 0.994, "query_cover": 0.9968 }, { "method": "VSEARCH", "scientificName": "Microcosmus curvus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250843", "accession": "KT693194", "identity": 0.993, "query_cover": 0.9968 } ] }
organismQuantity	1.0

Styela canopus in Fiji

Status

Styela canopus does not have an offial status in Fiji.

Notes

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