PacMAN decision support system

Potential detection of Xenostrobus securis in Fiji

Description:

Potential detection of Xenostrobus securis with confidence medium on 2022-06-20 in material sample S50, marker 18S

Confidence:

medium

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Xenostrobus securis
Mollusca > Bivalvia > Mytilida > Mytilidae
WoRMS: 140485

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

1.0

Reads:

64.0

Names:

1

Occurrences:

view occurrences

id	107dc99b-e655-4fa0-ba75-35d99fe43569
scientificName	Xenostrobus securis
AphiaID	140485
eventDate	2022-06-20
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S50
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGTCCAGGCTGGCGGTCCGGCGCATGCCGGTTACTGCTTGTCCTGACCTACCTCCCGGTCGCGCCCTTGGTGCTCTTGATTGAGTGTCTCGGGTCGCCGGAACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "EF186010.1.874_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949127.1.1708_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "EF186014.1.874_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "EF186008.1.874_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "DQ984672.1.877_U", "identity": 1, "query_cover": 0.9952 } ] }
organismQuantity	64.0

id	436a201f-2878-43a2-8cf6-2031bc9de68d
scientificName	Mytiloides
eventDate	2022-06-20
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S50
target_gene	18S
DNA_sequence	TGCTGGTTTTCGGAGCTCGAGGTAATGATTAAGAGGGACTGACGGGGGCATTCGTATTACGGTGTTAGAGGTGAAATTCTTGGATCGCCGTAAGACGAACCGCTGCGAAAGCGTTTGCCAAGAATGTTTTCATTAGTCAAGAACGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Mytiloida", "scientificNameID": "urn:lsid:marinespecies.org:taxname:1506984", "confidence": 0.88 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949127.1.1708_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949125.1.1657_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949134.1.1652_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949124.1.1657_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949130.1.1680_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	56.0

id	c3497a2e-b1c2-4bd0-a515-ee7b37ab4f5a
scientificName	Xenostrobus securis
AphiaID	140485
eventDate	2022-06-20
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S68
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGTCCAGGCTGGCGGTCCGGCGCATGCCGGTTACTGCTTGTCCTGACCTACCTCCCGGTCGCGCCCTTGGTGCTCTTGATTGAGTGTCTCGGGTCGCCGGAACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "EF186010.1.874_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949127.1.1708_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "EF186014.1.874_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "EF186008.1.874_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "DQ984672.1.877_U", "identity": 1, "query_cover": 0.9952 } ] }
organismQuantity	17.0

id	6ccba8a2-5185-4752-aa06-d4243328471e
scientificName	Mytiloides
eventDate	2022-06-20
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S68
target_gene	18S
DNA_sequence	TGCTGGTTTTCGGAGCTCGAGGTAATGATTAAGAGGGACTGACGGGGGCATTCGTATTACGGTGTTAGAGGTGAAATTCTTGGATCGCCGTAAGACGAACCGCTGCGAAAGCGTTTGCCAAGAATGTTTTCATTAGTCAAGAACGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Mytiloida", "scientificNameID": "urn:lsid:marinespecies.org:taxname:1506984", "confidence": 0.88 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949127.1.1708_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949125.1.1657_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949134.1.1652_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949124.1.1657_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949130.1.1680_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	13.0

id	26a081e6-2bae-447d-81a4-51ab52359295
scientificName	Xenostrobus securis
AphiaID	140485
eventDate	2022-06-20
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S40
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGTCCAGGCTGGCGGTCCGGCGCATGCCGGTTACTGCTTGTCCTGACCTACCTCCCGGTCGCGCCCTTGGTGCTCTTGATTGAGTGTCTCGGGTCGCCGGAACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "EF186010.1.874_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949127.1.1708_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "EF186014.1.874_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "EF186008.1.874_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "DQ984672.1.877_U", "identity": 1, "query_cover": 0.9952 } ] }
organismQuantity	1.0

id	3df5cadf-5823-44ff-9a6b-9053229ce2ec
scientificName	Xenostrobus securis
AphiaID	140485
eventDate	2022-06-20
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S41
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGTCCAGGCTGGCGGTCCGGCGCATGCCGGTTACTGCTTGTCCTGACCTACCTCCCGGTCGCGCCCTTGGTGCTCTTGATTGAGTGTCTCGGGTCGCCGGAACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "EF186010.1.874_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949127.1.1708_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "EF186014.1.874_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "EF186008.1.874_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "DQ984672.1.877_U", "identity": 1, "query_cover": 0.9952 } ] }
organismQuantity	1.0

id	d1eb5203-681c-45c5-9653-1556f8a8ebe5
scientificName	Mytiloides
eventDate	2022-06-20
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S40
target_gene	18S
DNA_sequence	TGCTGGTTTTCGGAGCTCGAGGTAATGATTAAGAGGGACTGACGGGGGCATTCGTATTACGGTGTTAGAGGTGAAATTCTTGGATCGCCGTAAGACGAACCGCTGCGAAAGCGTTTGCCAAGAATGTTTTCATTAGTCAAGAACGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Mytiloida", "scientificNameID": "urn:lsid:marinespecies.org:taxname:1506984", "confidence": 0.88 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949127.1.1708_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949125.1.1657_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949134.1.1652_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949124.1.1657_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949130.1.1680_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	1.0

id	f72000a6-6923-466d-a141-39cff51ef355
scientificName	Mytiloides
eventDate	2022-06-20
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S41
target_gene	18S
DNA_sequence	TGCTGGTTTTCGGAGCTCGAGGTAATGATTAAGAGGGACTGACGGGGGCATTCGTATTACGGTGTTAGAGGTGAAATTCTTGGATCGCCGTAAGACGAACCGCTGCGAAAGCGTTTGCCAAGAATGTTTTCATTAGTCAAGAACGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Mytiloida", "scientificNameID": "urn:lsid:marinespecies.org:taxname:1506984", "confidence": 0.88 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949127.1.1708_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949125.1.1657_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949134.1.1652_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949124.1.1657_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949130.1.1680_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	1.0

Xenostrobus securis in Fiji

Status

Xenostrobus securis does not have an offial status in Fiji.

Notes

No notes found.